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@ -1,15 +1,16 @@ |
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//! Store based on the [RocksDB](https://rocksdb.org/) key-value database.
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use crate::error::UnwrapInfallible; |
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use crate::error::{Infallible, UnwrapInfallible}; |
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use crate::model::*; |
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use crate::sparql::{Query, QueryOptions, QueryResult, SimplePreparedQuery}; |
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use crate::store::numeric_encoder::*; |
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use crate::store::{ |
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dump_dataset, dump_graph, load_dataset, load_graph, ReadableEncodedStore, WritableEncodedStore, |
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}; |
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use crate::{DatasetSyntax, GraphSyntax, Result}; |
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use crate::{DatasetSyntax, GraphSyntax}; |
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use rocksdb::*; |
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use std::convert::{Infallible, TryInto}; |
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use std::convert::TryInto; |
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use std::io; |
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use std::io::{BufRead, Cursor, Write}; |
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use std::mem::{take, transmute}; |
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use std::path::Path; |
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@ -23,8 +24,8 @@ use std::{fmt, str}; |
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///
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/// Usage example:
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/// ```
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/// use oxigraph::RocksDbStore;
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/// use oxigraph::model::*;
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/// use oxigraph::{Result, RocksDbStore};
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/// use oxigraph::sparql::{QueryOptions, QueryResult};
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/// # use std::fs::remove_dir_all;
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///
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@ -37,7 +38,7 @@ use std::{fmt, str}; |
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/// store.insert(&quad)?;
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///
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/// // quad filter
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/// let results: Result<Vec<Quad>> = store.quads_for_pattern(None, None, None, None).collect();
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/// let results: Result<Vec<Quad>,_> = store.quads_for_pattern(None, None, None, None).collect();
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/// assert_eq!(vec![quad], results?);
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///
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/// // SPARQL query
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@ -47,7 +48,7 @@ use std::{fmt, str}; |
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/// #
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/// # };
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/// # remove_dir_all("example.db")?;
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/// # Result::Ok(())
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/// # oxigraph::Result::Ok(())
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/// ```
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#[derive(Clone)] |
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pub struct RocksDbStore { |
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@ -72,14 +73,14 @@ const MAX_TRANSACTION_SIZE: usize = 1024; |
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impl RocksDbStore { |
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/// Opens a `RocksDbStore`
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pub fn open(path: impl AsRef<Path>) -> Result<Self> { |
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pub fn open(path: impl AsRef<Path>) -> Result<Self, io::Error> { |
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let mut options = Options::default(); |
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options.create_if_missing(true); |
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options.create_missing_column_families(true); |
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options.set_compaction_style(DBCompactionStyle::Universal); |
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let new = Self { |
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db: Arc::new(DB::open_cf(&options, path, &COLUMN_FAMILIES)?), |
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db: Arc::new(DB::open_cf(&options, path, &COLUMN_FAMILIES).map_err(map_err)?), |
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}; |
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let mut transaction = new.auto_batch_writer(); |
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@ -96,7 +97,7 @@ impl RocksDbStore { |
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&self, |
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query: impl TryInto<Query, Error = impl Into<crate::Error>>, |
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options: QueryOptions, |
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) -> Result<QueryResult> { |
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) -> Result<QueryResult, crate::Error> { |
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self.prepare_query(query, options)?.exec() |
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} |
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@ -108,7 +109,7 @@ impl RocksDbStore { |
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&self, |
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query: impl TryInto<Query, Error = impl Into<crate::Error>>, |
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options: QueryOptions, |
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) -> Result<RocksDbPreparedQuery> { |
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) -> Result<RocksDbPreparedQuery, crate::Error> { |
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Ok(RocksDbPreparedQuery(SimplePreparedQuery::new( |
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(*self).clone(), |
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query, |
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@ -125,7 +126,7 @@ impl RocksDbStore { |
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predicate: Option<&NamedNode>, |
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object: Option<&Term>, |
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graph_name: Option<&GraphName>, |
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) -> impl Iterator<Item = Result<Quad>> { |
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) -> impl Iterator<Item = Result<Quad, io::Error>> { |
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let subject = subject.map(|s| s.into()); |
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let predicate = predicate.map(|p| p.into()); |
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let object = object.map(|o| o.into()); |
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@ -136,7 +137,7 @@ impl RocksDbStore { |
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} |
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/// Checks if this store contains a given quad
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pub fn contains(&self, quad: &Quad) -> Result<bool> { |
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pub fn contains(&self, quad: &Quad) -> Result<bool, io::Error> { |
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let quad = quad.into(); |
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self.contains_encoded(&quad) |
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} |
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@ -162,10 +163,10 @@ impl RocksDbStore { |
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/// Nothing is done if the closure returns `Err`.
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///
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/// See `MemoryStore` for a usage example.
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pub fn transaction<'a>( |
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pub fn transaction<'a, E: From<io::Error>>( |
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&'a self, |
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f: impl FnOnce(&mut RocksDbTransaction<'a>) -> Result<()>, |
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) -> Result<()> { |
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f: impl FnOnce(&mut RocksDbTransaction<'a>) -> Result<(), E>, |
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) -> Result<(), E> { |
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let mut transaction = RocksDbTransaction { |
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inner: BatchWriter { |
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store: self, |
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@ -174,7 +175,7 @@ impl RocksDbStore { |
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}, |
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}; |
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f(&mut transaction)?; |
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transaction.inner.apply() |
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Ok(transaction.inner.apply()?) |
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} |
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/// Loads a graph file (i.e. triples) into the store
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@ -189,10 +190,10 @@ impl RocksDbStore { |
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syntax: GraphSyntax, |
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to_graph_name: &GraphName, |
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base_iri: Option<&str>, |
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) -> Result<()> { |
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) -> Result<(), crate::Error> { |
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let mut transaction = self.auto_batch_writer(); |
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load_graph(&mut transaction, reader, syntax, to_graph_name, base_iri)?; |
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transaction.apply() |
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Ok(transaction.apply()?) |
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} |
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/// Loads a dataset file (i.e. quads) into the store.
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@ -206,14 +207,14 @@ impl RocksDbStore { |
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reader: impl BufRead, |
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syntax: DatasetSyntax, |
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base_iri: Option<&str>, |
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) -> Result<()> { |
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) -> Result<(), crate::Error> { |
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let mut transaction = self.auto_batch_writer(); |
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load_dataset(&mut transaction, reader, syntax, base_iri)?; |
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transaction.apply() |
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Ok(transaction.apply()?) |
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} |
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/// Adds a quad to this store.
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pub fn insert(&self, quad: &Quad) -> Result<()> { |
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pub fn insert(&self, quad: &Quad) -> Result<(), io::Error> { |
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let mut transaction = self.auto_batch_writer(); |
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let quad = transaction.encode_quad(quad)?; |
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transaction.insert_encoded(&quad)?; |
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@ -221,7 +222,7 @@ impl RocksDbStore { |
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} |
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/// Removes a quad from this store.
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pub fn remove(&self, quad: &Quad) -> Result<()> { |
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pub fn remove(&self, quad: &Quad) -> Result<(), io::Error> { |
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let mut transaction = self.auto_batch_writer(); |
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let quad = quad.into(); |
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transaction.remove_encoded(&quad)?; |
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@ -236,7 +237,7 @@ impl RocksDbStore { |
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writer: &mut impl Write, |
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syntax: GraphSyntax, |
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from_graph_name: &GraphName, |
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) -> Result<()> { |
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) -> Result<(), io::Error> { |
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dump_graph( |
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self.quads_for_pattern(None, None, None, Some(from_graph_name)) |
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.map(|q| Ok(q?.into())), |
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@ -248,7 +249,11 @@ impl RocksDbStore { |
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/// Dumps the store dataset into a file.
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///
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/// See `MemoryStore` for a usage example.
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pub fn dump_dataset(&self, writer: &mut impl Write, syntax: DatasetSyntax) -> Result<()> { |
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pub fn dump_dataset( |
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&self, |
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writer: &mut impl Write, |
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syntax: DatasetSyntax, |
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) -> Result<(), io::Error> { |
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dump_dataset( |
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self.quads_for_pattern(None, None, None, None), |
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writer, |
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@ -294,10 +299,14 @@ impl RocksDbStore { |
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} |
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} |
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fn contains_encoded(&self, quad: &EncodedQuad) -> Result<bool> { |
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fn contains_encoded(&self, quad: &EncodedQuad) -> Result<bool, io::Error> { |
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let mut buffer = Vec::with_capacity(4 * WRITTEN_TERM_MAX_SIZE); |
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write_spog_quad(&mut buffer, quad); |
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Ok(self.db.get_pinned_cf(self.spog_cf(), &buffer)?.is_some()) |
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Ok(self |
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.db |
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.get_pinned_cf(self.spog_cf(), &buffer) |
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.map_err(map_err)? |
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.is_some()) |
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} |
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fn quads(&self) -> DecodingIndexIterator { |
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@ -455,18 +464,20 @@ impl fmt::Display for RocksDbStore { |
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} |
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impl StrLookup for RocksDbStore { |
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type Error = crate::Error; |
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type Error = io::Error; |
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fn get_str(&self, id: StrHash) -> Result<Option<String>> { |
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Ok(self |
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.db |
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.get_cf(self.id2str_cf(), &id.to_be_bytes())? |
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fn get_str(&self, id: StrHash) -> Result<Option<String>, io::Error> { |
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self.db |
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.get_cf(self.id2str_cf(), &id.to_be_bytes()) |
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.map_err(map_err)? |
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.map(String::from_utf8) |
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.transpose()?) |
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.transpose() |
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.map_err(|e| io::Error::new(io::ErrorKind::InvalidData, e)) |
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} |
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} |
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impl ReadableEncodedStore for RocksDbStore { |
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type Error = io::Error; |
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type QuadsIter = DecodingIndexIterator; |
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fn encoded_quads_for_pattern( |
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@ -538,7 +549,7 @@ pub struct RocksDbPreparedQuery(SimplePreparedQuery<RocksDbStore>); |
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impl RocksDbPreparedQuery { |
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/// Evaluates the query and returns its results
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pub fn exec(&self) -> Result<QueryResult> { |
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pub fn exec(&self) -> Result<QueryResult, crate::Error> { |
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self.0.exec() |
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} |
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} |
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@ -562,7 +573,7 @@ impl RocksDbTransaction<'_> { |
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syntax: GraphSyntax, |
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to_graph_name: &GraphName, |
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base_iri: Option<&str>, |
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) -> Result<()> { |
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) -> Result<(), crate::Error> { |
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load_graph(&mut self.inner, reader, syntax, to_graph_name, base_iri) |
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} |
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@ -578,7 +589,7 @@ impl RocksDbTransaction<'_> { |
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reader: impl BufRead, |
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syntax: DatasetSyntax, |
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base_iri: Option<&str>, |
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) -> Result<()> { |
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) -> Result<(), crate::Error> { |
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load_dataset(&mut self.inner, reader, syntax, base_iri) |
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} |
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@ -604,7 +615,7 @@ struct BatchWriter<'a> { |
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impl StrContainer for BatchWriter<'_> { |
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type Error = Infallible; |
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fn insert_str(&mut self, key: StrHash, value: &str) -> std::result::Result<(), Infallible> { |
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fn insert_str(&mut self, key: StrHash, value: &str) -> Result<(), Infallible> { |
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self.batch |
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.put_cf(self.store.id2str_cf(), &key.to_be_bytes(), value); |
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Ok(()) |
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@ -614,7 +625,7 @@ impl StrContainer for BatchWriter<'_> { |
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impl WritableEncodedStore for BatchWriter<'_> { |
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type Error = Infallible; |
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fn insert_encoded(&mut self, quad: &EncodedQuad) -> std::result::Result<(), Infallible> { |
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fn insert_encoded(&mut self, quad: &EncodedQuad) -> Result<(), Infallible> { |
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write_spog_quad(&mut self.buffer, quad); |
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self.batch.put_cf(self.store.spog_cf(), &self.buffer, &[]); |
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self.buffer.clear(); |
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@ -642,7 +653,7 @@ impl WritableEncodedStore for BatchWriter<'_> { |
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Ok(()) |
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} |
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fn remove_encoded(&mut self, quad: &EncodedQuad) -> std::result::Result<(), Infallible> { |
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fn remove_encoded(&mut self, quad: &EncodedQuad) -> Result<(), Infallible> { |
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write_spog_quad(&mut self.buffer, quad); |
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self.batch.delete_cf(self.store.spog_cf(), &self.buffer); |
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self.buffer.clear(); |
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@ -672,8 +683,8 @@ impl WritableEncodedStore for BatchWriter<'_> { |
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} |
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impl BatchWriter<'_> { |
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fn apply(self) -> Result<()> { |
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Ok(self.store.db.write(self.batch)?) |
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fn apply(self) -> Result<(), io::Error> { |
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self.store.db.write(self.batch).map_err(map_err) |
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} |
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} |
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@ -682,35 +693,39 @@ struct AutoBatchWriter<'a> { |
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} |
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impl StrContainer for AutoBatchWriter<'_> { |
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type Error = crate::Error; |
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type Error = io::Error; |
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fn insert_str(&mut self, key: StrHash, value: &str) -> Result<()> { |
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fn insert_str(&mut self, key: StrHash, value: &str) -> Result<(), io::Error> { |
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Ok(self.inner.insert_str(key, value)?) |
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} |
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} |
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impl WritableEncodedStore for AutoBatchWriter<'_> { |
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type Error = crate::Error; |
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type Error = io::Error; |
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fn insert_encoded(&mut self, quad: &EncodedQuad) -> Result<()> { |
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fn insert_encoded(&mut self, quad: &EncodedQuad) -> Result<(), io::Error> { |
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self.inner.insert_encoded(quad)?; |
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self.apply_if_big() |
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} |
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fn remove_encoded(&mut self, quad: &EncodedQuad) -> Result<()> { |
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fn remove_encoded(&mut self, quad: &EncodedQuad) -> Result<(), io::Error> { |
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self.inner.remove_encoded(quad)?; |
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self.apply_if_big() |
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} |
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} |
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impl AutoBatchWriter<'_> { |
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fn apply(self) -> Result<()> { |
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fn apply(self) -> Result<(), io::Error> { |
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self.inner.apply() |
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} |
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fn apply_if_big(&mut self) -> Result<()> { |
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fn apply_if_big(&mut self) -> Result<(), io::Error> { |
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if self.inner.batch.len() > MAX_TRANSACTION_SIZE { |
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self.inner.store.db.write(take(&mut self.inner.batch))?; |
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self.inner |
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.store |
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.db |
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.write(take(&mut self.inner.batch)) |
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.map_err(map_err)?; |
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} |
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Ok(()) |
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} |
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@ -779,12 +794,12 @@ pub(crate) struct DecodingIndexIterator { |
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} |
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impl Iterator for DecodingIndexIterator { |
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type Item = Result<EncodedQuad>; |
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type Item = Result<EncodedQuad, io::Error>; |
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fn next(&mut self) -> Option<Result<EncodedQuad>> { |
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fn next(&mut self) -> Option<Result<EncodedQuad, io::Error>> { |
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if let Some(key) = self.iter.iter.key() { |
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if key.starts_with(&self.prefix) { |
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let result = self.encoding.decode(key).map_err(crate::Error::from); |
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let result = self.encoding.decode(key); |
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self.iter.iter.next(); |
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Some(result) |
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} else { |
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@ -849,23 +864,26 @@ enum QuadEncoding { |
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} |
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impl QuadEncoding { |
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fn decode(self, buffer: &[u8]) -> Result<EncodedQuad> { |
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fn decode(self, buffer: &[u8]) -> Result<EncodedQuad, io::Error> { |
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|
let mut cursor = Cursor::new(&buffer); |
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Ok(match self { |
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match self { |
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QuadEncoding::SPOG => cursor.read_spog_quad(), |
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QuadEncoding::POSG => cursor.read_posg_quad(), |
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QuadEncoding::OSPG => cursor.read_ospg_quad(), |
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QuadEncoding::GSPO => cursor.read_gspo_quad(), |
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QuadEncoding::GPOS => cursor.read_gpos_quad(), |
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QuadEncoding::GOSP => cursor.read_gosp_quad(), |
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}?) |
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} |
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} |
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} |
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|
fn map_err(e: Error) -> io::Error { |
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|
io::Error::new(io::ErrorKind::Other, e) |
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|
} |
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|
#[test] |
|
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|
|
fn store() -> Result<()> { |
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|
|
fn store() -> Result<(), crate::Error> { |
|
|
|
|
use crate::model::*; |
|
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|
|
use crate::*; |
|
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|
|
use rand::random; |
|
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|
|
use std::env::temp_dir; |
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|
|
|
use std::fs::remove_dir_all; |
|
|
|
@ -895,25 +913,25 @@ fn store() -> Result<()> { |
|
|
|
|
assert_eq!( |
|
|
|
|
store |
|
|
|
|
.quads_for_pattern(None, None, None, None) |
|
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|
|
.collect::<Result<Vec<_>>>()?, |
|
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|
|
.collect::<Result<Vec<_>, _>>()?, |
|
|
|
|
all_o |
|
|
|
|
); |
|
|
|
|
assert_eq!( |
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|
|
|
store |
|
|
|
|
.quads_for_pattern(Some(&main_s), None, None, None) |
|
|
|
|
.collect::<Result<Vec<_>>>()?, |
|
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|
|
.collect::<Result<Vec<_>, _>>()?, |
|
|
|
|
all_o |
|
|
|
|
); |
|
|
|
|
assert_eq!( |
|
|
|
|
store |
|
|
|
|
.quads_for_pattern(Some(&main_s), Some(&main_p), None, None) |
|
|
|
|
.collect::<Result<Vec<_>>>()?, |
|
|
|
|
.collect::<Result<Vec<_>, _>>()?, |
|
|
|
|
all_o |
|
|
|
|
); |
|
|
|
|
assert_eq!( |
|
|
|
|
store |
|
|
|
|
.quads_for_pattern(Some(&main_s), Some(&main_p), Some(&main_o), None) |
|
|
|
|
.collect::<Result<Vec<_>>>()?, |
|
|
|
|
.collect::<Result<Vec<_>, _>>()?, |
|
|
|
|
target |
|
|
|
|
); |
|
|
|
|
assert_eq!( |
|
|
|
@ -924,7 +942,7 @@ fn store() -> Result<()> { |
|
|
|
|
Some(&main_o), |
|
|
|
|
Some(&GraphName::DefaultGraph) |
|
|
|
|
) |
|
|
|
|
.collect::<Result<Vec<_>>>()?, |
|
|
|
|
.collect::<Result<Vec<_>, _>>()?, |
|
|
|
|
target |
|
|
|
|
); |
|
|
|
|
assert_eq!( |
|
|
|
@ -935,13 +953,13 @@ fn store() -> Result<()> { |
|
|
|
|
None, |
|
|
|
|
Some(&GraphName::DefaultGraph) |
|
|
|
|
) |
|
|
|
|
.collect::<Result<Vec<_>>>()?, |
|
|
|
|
.collect::<Result<Vec<_>, _>>()?, |
|
|
|
|
all_o |
|
|
|
|
); |
|
|
|
|
assert_eq!( |
|
|
|
|
store |
|
|
|
|
.quads_for_pattern(Some(&main_s), None, Some(&main_o), None) |
|
|
|
|
.collect::<Result<Vec<_>>>()?, |
|
|
|
|
.collect::<Result<Vec<_>, _>>()?, |
|
|
|
|
target |
|
|
|
|
); |
|
|
|
|
assert_eq!( |
|
|
|
@ -952,37 +970,37 @@ fn store() -> Result<()> { |
|
|
|
|
Some(&main_o), |
|
|
|
|
Some(&GraphName::DefaultGraph) |
|
|
|
|
) |
|
|
|
|
.collect::<Result<Vec<_>>>()?, |
|
|
|
|
.collect::<Result<Vec<_>, _>>()?, |
|
|
|
|
target |
|
|
|
|
); |
|
|
|
|
assert_eq!( |
|
|
|
|
store |
|
|
|
|
.quads_for_pattern(Some(&main_s), None, None, Some(&GraphName::DefaultGraph)) |
|
|
|
|
.collect::<Result<Vec<_>>>()?, |
|
|
|
|
.collect::<Result<Vec<_>, _>>()?, |
|
|
|
|
all_o |
|
|
|
|
); |
|
|
|
|
assert_eq!( |
|
|
|
|
store |
|
|
|
|
.quads_for_pattern(None, Some(&main_p), None, None) |
|
|
|
|
.collect::<Result<Vec<_>>>()?, |
|
|
|
|
.collect::<Result<Vec<_>, _>>()?, |
|
|
|
|
all_o |
|
|
|
|
); |
|
|
|
|
assert_eq!( |
|
|
|
|
store |
|
|
|
|
.quads_for_pattern(None, Some(&main_p), Some(&main_o), None) |
|
|
|
|
.collect::<Result<Vec<_>>>()?, |
|
|
|
|
.collect::<Result<Vec<_>, _>>()?, |
|
|
|
|
target |
|
|
|
|
); |
|
|
|
|
assert_eq!( |
|
|
|
|
store |
|
|
|
|
.quads_for_pattern(None, None, Some(&main_o), None) |
|
|
|
|
.collect::<Result<Vec<_>>>()?, |
|
|
|
|
.collect::<Result<Vec<_>, _>>()?, |
|
|
|
|
target |
|
|
|
|
); |
|
|
|
|
assert_eq!( |
|
|
|
|
store |
|
|
|
|
.quads_for_pattern(None, None, None, Some(&GraphName::DefaultGraph)) |
|
|
|
|
.collect::<Result<Vec<_>>>()?, |
|
|
|
|
.collect::<Result<Vec<_>, _>>()?, |
|
|
|
|
all_o |
|
|
|
|
); |
|
|
|
|
assert_eq!( |
|
|
|
@ -993,7 +1011,7 @@ fn store() -> Result<()> { |
|
|
|
|
Some(&main_o), |
|
|
|
|
Some(&GraphName::DefaultGraph) |
|
|
|
|
) |
|
|
|
|
.collect::<Result<Vec<_>>>()?, |
|
|
|
|
.collect::<Result<Vec<_>, _>>()?, |
|
|
|
|
target |
|
|
|
|
); |
|
|
|
|
} |
|
|
|
|