From a924df0e0a901d51f9fd95189da18f3999c4eb98 Mon Sep 17 00:00:00 2001
From: Yuri Astrakhan <yuriastrakhan@gmail.com>
Date: Thu, 8 Feb 2024 04:38:41 -0500
Subject: [PATCH] Clean workspace dependency list and updates dependencies

---
 Cargo.lock           | 156 ++++++++++++++++++++++++-------------------
 Cargo.toml           |  24 ++++---
 lib/oxrdf/Cargo.toml |   2 +-
 testsuite/Cargo.toml |   2 +-
 4 files changed, 103 insertions(+), 81 deletions(-)

diff --git a/Cargo.lock b/Cargo.lock
index e33d7c52..5245a514 100644
--- a/Cargo.lock
+++ b/Cargo.lock
@@ -48,9 +48,9 @@ dependencies = [
 
 [[package]]
 name = "anstyle"
-version = "1.0.4"
+version = "1.0.6"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "7079075b41f533b8c61d2a4d073c4676e1f8b249ff94a393b0595db304e0dd87"
+checksum = "8901269c6307e8d93993578286ac0edf7f195079ffff5ebdeea6a59ffb7e36bc"
 
 [[package]]
 name = "anstyle-parse"
@@ -154,17 +154,17 @@ checksum = "9d297deb1925b89f2ccc13d7635fa0714f12c87adce1c75356b39ca9b7178567"
 
 [[package]]
 name = "bindgen"
-version = "0.69.2"
+version = "0.69.4"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "a4c69fae65a523209d34240b60abe0c42d33d1045d445c0839d8a4894a736e2d"
+checksum = "a00dc851838a2120612785d195287475a3ac45514741da670b735818822129a0"
 dependencies = [
  "bitflags 2.4.2",
  "cexpr",
  "clang-sys",
+ "itertools 0.12.1",
  "lazy_static",
  "lazycell",
  "log",
- "peeking_take_while",
  "prettyplease",
  "proc-macro2",
  "quote",
@@ -252,9 +252,9 @@ checksum = "baf1de4339761588bc0619e3cbc0120ee582ebb74b53b4efbf79117bd2da40fd"
 
 [[package]]
 name = "ciborium"
-version = "0.2.1"
+version = "0.2.2"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "effd91f6c78e5a4ace8a5d3c0b6bfaec9e2baaef55f3efc00e45fb2e477ee926"
+checksum = "42e69ffd6f0917f5c029256a24d0161db17cea3997d185db0d35926308770f0e"
 dependencies = [
  "ciborium-io",
  "ciborium-ll",
@@ -263,15 +263,15 @@ dependencies = [
 
 [[package]]
 name = "ciborium-io"
-version = "0.2.1"
+version = "0.2.2"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "cdf919175532b369853f5d5e20b26b43112613fd6fe7aee757e35f7a44642656"
+checksum = "05afea1e0a06c9be33d539b876f1ce3692f4afea2cb41f740e7743225ed1c757"
 
 [[package]]
 name = "ciborium-ll"
-version = "0.2.1"
+version = "0.2.2"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "defaa24ecc093c77630e6c15e17c51f5e187bf35ee514f4e2d67baaa96dae22b"
+checksum = "57663b653d948a338bfb3eeba9bb2fd5fcfaecb9e199e87e1eda4d9e8b240fd9"
 dependencies = [
  "ciborium-io",
  "half",
@@ -422,7 +422,7 @@ dependencies = [
  "clap",
  "criterion-plot",
  "is-terminal",
- "itertools",
+ "itertools 0.10.5",
  "num-traits",
  "once_cell",
  "oorandom",
@@ -443,7 +443,7 @@ source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "6b50826342786a51a89e2da3a28f1c32b06e387201bc2d19791f622c673706b1"
 dependencies = [
  "cast",
- "itertools",
+ "itertools 0.10.5",
 ]
 
 [[package]]
@@ -471,6 +471,12 @@ version = "0.8.19"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "248e3bacc7dc6baa3b21e405ee045c3047101a49145e7e9eca583ab4c2ca5345"
 
+[[package]]
+name = "crunchy"
+version = "0.2.2"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "7a81dae078cea95a014a339291cec439d2f232ebe854a9d672b796c6afafa9b7"
+
 [[package]]
 name = "crypto-common"
 version = "0.1.6"
@@ -670,9 +676,13 @@ dependencies = [
 
 [[package]]
 name = "half"
-version = "1.8.2"
+version = "2.3.1"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "eabb4a44450da02c90444cf74558da904edde8fb4e9035a9a6a4e15445af0bd7"
+checksum = "bc52e53916c08643f1b56ec082790d1e86a32e58dc5268f897f313fbae7b4872"
+dependencies = [
+ "cfg-if",
+ "crunchy",
+]
 
 [[package]]
 name = "heck"
@@ -682,9 +692,9 @@ checksum = "95505c38b4572b2d910cecb0281560f54b440a19336cbbcb27bf6ce6adc6f5a8"
 
 [[package]]
 name = "hermit-abi"
-version = "0.3.4"
+version = "0.3.5"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "5d3d0e0f38255e7fa3cf31335b3a56f05febd18025f4db5ef7a0cfb4f8da651f"
+checksum = "d0c62115964e08cb8039170eb33c1d0e2388a256930279edca206fff675f82c3"
 
 [[package]]
 name = "hex"
@@ -759,6 +769,15 @@ dependencies = [
  "either",
 ]
 
+[[package]]
+name = "itertools"
+version = "0.12.1"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "ba291022dbbd398a455acf126c1e341954079855bc60dfdda641363bd6922569"
+dependencies = [
+ "either",
+]
+
 [[package]]
 name = "itoa"
 version = "1.0.10"
@@ -776,9 +795,9 @@ dependencies = [
 
 [[package]]
 name = "js-sys"
-version = "0.3.67"
+version = "0.3.68"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "9a1d36f1235bc969acba30b7f5990b864423a6068a10f7c90ae8f0112e3a59d1"
+checksum = "406cda4b368d531c842222cf9d2600a9a4acce8d29423695379c6868a143a9ee"
 dependencies = [
  "wasm-bindgen",
 ]
@@ -816,9 +835,9 @@ checksum = "830d08ce1d1d941e6b30645f1a0eb5643013d835ce3779a5fc208261dbe10f55"
 
 [[package]]
 name = "libc"
-version = "0.2.152"
+version = "0.2.153"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "13e3bf6590cbc649f4d1a3eefc9d5d6eb746f5200ffb04e5e142700b8faa56e7"
+checksum = "9c198f91728a82281a64e1f4f9eeb25d82cb32a5de251c6bd1b5154d63a8e7bd"
 
 [[package]]
 name = "libloading"
@@ -885,9 +904,9 @@ checksum = "68354c5c6bd36d73ff3feceb05efa59b6acb7626617f4962be322a825e61f79a"
 
 [[package]]
 name = "miniz_oxide"
-version = "0.7.1"
+version = "0.7.2"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "e7810e0be55b428ada41041c41f32c9f1a42817901b4ccf45fa3d4b6561e74c7"
+checksum = "9d811f3e15f28568be3407c8e7fdb6514c1cda3cb30683f15b6a1a1dc4ea14a7"
 dependencies = [
  "adler",
 ]
@@ -926,11 +945,17 @@ version = "0.3.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "61807f77802ff30975e01f4f071c8ba10c022052f98b3294119f3e615d13e5be"
 
+[[package]]
+name = "num-conv"
+version = "0.1.0"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "51d515d32fb182ee37cda2ccdcb92950d6a3c2893aa280e540671c2cd0f3b1d9"
+
 [[package]]
 name = "num-traits"
-version = "0.2.17"
+version = "0.2.18"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "39e3200413f237f41ab11ad6d161bc7239c84dcb631773ccd7de3dfe4b5c267c"
+checksum = "da0df0e5185db44f69b44f26786fe401b6c293d1907744beaa7fa62b2e5a517a"
 dependencies = [
  "autocfg",
 ]
@@ -1184,12 +1209,6 @@ dependencies = [
  "windows-targets 0.48.5",
 ]
 
-[[package]]
-name = "peeking_take_while"
-version = "0.1.2"
-source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "19b17cddbe7ec3f8bc800887bab5e717348c95ea2ca0b1bf0837fb964dc67099"
-
 [[package]]
 name = "peg"
 version = "0.8.2"
@@ -1485,9 +1504,9 @@ dependencies = [
 
 [[package]]
 name = "regex-automata"
-version = "0.4.4"
+version = "0.4.5"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "3b7fa1134405e2ec9353fd416b17f8dacd46c473d7d3fd1cf202706a14eb792a"
+checksum = "5bb987efffd3c6d0d8f5f89510bb458559eab11e4f869acb20bf845e016259cd"
 dependencies = [
  "aho-corasick",
  "memchr",
@@ -1528,9 +1547,9 @@ checksum = "08d43f7aa6b08d49f382cde6a7982047c3426db949b1424bc4b7ec9ae12c6ce2"
 
 [[package]]
 name = "rustix"
-version = "0.38.30"
+version = "0.38.31"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "322394588aaf33c24007e8bb3238ee3e4c5c09c084ab32bc73890b99ff326bca"
+checksum = "6ea3e1a662af26cd7a3ba09c0297a31af215563ecf42817c98df621387f4e949"
 dependencies = [
  "bitflags 2.4.2",
  "errno",
@@ -1578,15 +1597,15 @@ dependencies = [
 
 [[package]]
 name = "rustls-pki-types"
-version = "1.1.0"
+version = "1.2.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "9e9d979b3ce68192e42760c7810125eb6cf2ea10efae545a156063e61f314e2a"
+checksum = "0a716eb65e3158e90e17cd93d855216e27bde02745ab842f2cab4a39dba1bacf"
 
 [[package]]
 name = "rustls-webpki"
-version = "0.102.1"
+version = "0.102.2"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "ef4ca26037c909dedb327b48c3327d0ba91d3dd3c4e05dad328f210ffb68e95b"
+checksum = "faaa0a62740bedb9b2ef5afa303da42764c012f743917351dc9a237ea1663610"
 dependencies = [
  "ring",
  "rustls-pki-types",
@@ -1648,18 +1667,18 @@ dependencies = [
 
 [[package]]
 name = "serde"
-version = "1.0.195"
+version = "1.0.196"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "63261df402c67811e9ac6def069e4786148c4563f4b50fd4bf30aa370d626b02"
+checksum = "870026e60fa08c69f064aa766c10f10b1d62db9ccd4d0abb206472bee0ce3b32"
 dependencies = [
  "serde_derive",
 ]
 
 [[package]]
 name = "serde_derive"
-version = "1.0.195"
+version = "1.0.196"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "46fe8f8603d81ba86327b23a2e9cdf49e1255fb94a4c5f297f6ee0547178ea2c"
+checksum = "33c85360c95e7d137454dc81d9a4ed2b8efd8fbe19cee57357b32b9771fccb67"
 dependencies = [
  "proc-macro2",
  "quote",
@@ -1668,9 +1687,9 @@ dependencies = [
 
 [[package]]
 name = "serde_json"
-version = "1.0.111"
+version = "1.0.113"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "176e46fa42316f18edd598015a5166857fc835ec732f5215eac6b7bdbf0a84f4"
+checksum = "69801b70b1c3dac963ecb03a364ba0ceda9cf60c71cfe475e99864759c8b8a79"
 dependencies = [
  "itoa",
  "ryu",
@@ -1792,13 +1811,12 @@ checksum = "69758bda2e78f098e4ccb393021a0963bb3442eac05f135c30f61b7370bbafae"
 
 [[package]]
 name = "tempfile"
-version = "3.9.0"
+version = "3.10.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "01ce4141aa927a6d1bd34a041795abd0db1cccba5d5f24b009f694bdf3a1f3fa"
+checksum = "a365e8cd18e44762ef95d87f284f4b5cd04107fec2ff3052bd6a3e6069669e67"
 dependencies = [
  "cfg-if",
  "fastrand",
- "redox_syscall",
  "rustix",
  "windows-sys 0.52.0",
 ]
@@ -1831,12 +1849,13 @@ dependencies = [
 
 [[package]]
 name = "time"
-version = "0.3.31"
+version = "0.3.34"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "f657ba42c3f86e7680e53c8cd3af8abbe56b5491790b46e22e19c0d57463583e"
+checksum = "c8248b6521bb14bc45b4067159b9b6ad792e2d6d754d6c41fb50e29fefe38749"
 dependencies = [
  "deranged",
  "itoa",
+ "num-conv",
  "powerfmt",
  "serde",
  "time-core",
@@ -1851,10 +1870,11 @@ checksum = "ef927ca75afb808a4d64dd374f00a2adf8d0fcff8e7b184af886c3c87ec4a3f3"
 
 [[package]]
 name = "time-macros"
-version = "0.2.16"
+version = "0.2.17"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "26197e33420244aeb70c3e8c78376ca46571bc4e701e4791c2cd9f57dcb3a43f"
+checksum = "7ba3a3ef41e6672a2f0f001392bb5dcd3ff0a9992d618ca761a11c3121547774"
 dependencies = [
+ "num-conv",
  "time-core",
 ]
 
@@ -1885,9 +1905,9 @@ checksum = "1f3ccbac311fea05f86f61904b462b55fb3df8837a366dfc601a0161d0532f20"
 
 [[package]]
 name = "tokio"
-version = "1.35.1"
+version = "1.36.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "c89b4efa943be685f629b149f53829423f8f5531ea21249408e8e2f8671ec104"
+checksum = "61285f6515fa018fb2d1e46eb21223fff441ee8db5d0f1435e8ab4f5cdb80931"
 dependencies = [
  "backtrace",
  "bytes",
@@ -2007,9 +2027,9 @@ checksum = "9c8d87e72b64a3b4db28d11ce29237c246188f4f51057d65a7eab63b7987e423"
 
 [[package]]
 name = "wasm-bindgen"
-version = "0.2.90"
+version = "0.2.91"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "b1223296a201415c7fad14792dbefaace9bd52b62d33453ade1c5b5f07555406"
+checksum = "c1e124130aee3fb58c5bdd6b639a0509486b0338acaaae0c84a5124b0f588b7f"
 dependencies = [
  "cfg-if",
  "wasm-bindgen-macro",
@@ -2017,9 +2037,9 @@ dependencies = [
 
 [[package]]
 name = "wasm-bindgen-backend"
-version = "0.2.90"
+version = "0.2.91"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "fcdc935b63408d58a32f8cc9738a0bffd8f05cc7c002086c6ef20b7312ad9dcd"
+checksum = "c9e7e1900c352b609c8488ad12639a311045f40a35491fb69ba8c12f758af70b"
 dependencies = [
  "bumpalo",
  "log",
@@ -2032,9 +2052,9 @@ dependencies = [
 
 [[package]]
 name = "wasm-bindgen-macro"
-version = "0.2.90"
+version = "0.2.91"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "3e4c238561b2d428924c49815533a8b9121c664599558a5d9ec51f8a1740a999"
+checksum = "b30af9e2d358182b5c7449424f017eba305ed32a7010509ede96cdc4696c46ed"
 dependencies = [
  "quote",
  "wasm-bindgen-macro-support",
@@ -2042,9 +2062,9 @@ dependencies = [
 
 [[package]]
 name = "wasm-bindgen-macro-support"
-version = "0.2.90"
+version = "0.2.91"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "bae1abb6806dc1ad9e560ed242107c0f6c84335f1749dd4e8ddb012ebd5e25a7"
+checksum = "642f325be6301eb8107a83d12a8ac6c1e1c54345a7ef1a9261962dfefda09e66"
 dependencies = [
  "proc-macro2",
  "quote",
@@ -2055,15 +2075,15 @@ dependencies = [
 
 [[package]]
 name = "wasm-bindgen-shared"
-version = "0.2.90"
+version = "0.2.91"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "4d91413b1c31d7539ba5ef2451af3f0b833a005eb27a631cec32bc0635a8602b"
+checksum = "4f186bd2dcf04330886ce82d6f33dd75a7bfcf69ecf5763b89fcde53b6ac9838"
 
 [[package]]
 name = "web-sys"
-version = "0.3.67"
+version = "0.3.68"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "58cd2333b6e0be7a39605f0e255892fd7418a682d8da8fe042fe25128794d2ed"
+checksum = "96565907687f7aceb35bc5fc03770a8a0471d82e479f25832f54a0e3f4b28446"
 dependencies = [
  "js-sys",
  "wasm-bindgen",
@@ -2071,9 +2091,9 @@ dependencies = [
 
 [[package]]
 name = "webpki-roots"
-version = "0.26.0"
+version = "0.26.1"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "0de2cfda980f21be5a7ed2eadb3e6fe074d56022bea2cdeb1a62eb220fc04188"
+checksum = "b3de34ae270483955a94f4b21bdaaeb83d508bb84a01435f393818edb0012009"
 dependencies = [
  "rustls-pki-types",
 ]
diff --git a/Cargo.toml b/Cargo.toml
index 91b1b7ec..7cbc711b 100644
--- a/Cargo.toml
+++ b/Cargo.toml
@@ -46,16 +46,8 @@ libc = "0.2.147"
 md-5 = "0.10"
 memchr = "2.5"
 oxhttp = "0.2.0-alpha.3"
-oxigraph = { version = "0.4.0-alpha.3-dev", path = "./lib/oxigraph" }
 oxilangtag = "0.1"
 oxiri = "0.2.3-alpha.1"
-oxrdf = { version = "0.2.0-alpha.2", path = "lib/oxrdf" }
-oxrdfdatatypes = { version = "0.2.0-alpha.1", path = "lib/oxsdatatypes" }
-oxrdfio = { version = "0.1.0-alpha.2", path = "lib/oxrdfio" }
-oxrdfxml = { version = "0.1.0-alpha.2", path = "lib/oxrdfxml" }
-oxrocksdb-sys = { version = "0.4.0-alpha.3-dev", path = "./oxrocksdb-sys" }
-oxsdatatypes = { version = "0.2.0-alpha.1", path = "lib/oxsdatatypes" }
-oxttl = { version = "0.1.0-alpha.2", path = "lib/oxttl" }
 peg = "0.8"
 pkg-config = "0.3.25"
 predicates = ">=2.0, <4.0"
@@ -67,9 +59,6 @@ regex = "1.7"
 sha1 = "0.10"
 sha2 = "0.10"
 siphasher = ">=0.3, <2.0"
-sparesults = { version = "0.2.0-alpha.2", path = "lib/sparesults" }
-spargebra = { version = "0.3.0-alpha.2", path = "lib/spargebra" }
-sparopt = { version = "0.1.0-alpha.2", path = "lib/sparopt"}
 text-diff = "0.4"
 time = "0.3"
 tokio = "1.29"
@@ -77,6 +66,19 @@ url = "2.4"
 wasm-bindgen = "0.2.83"
 zstd = ">=0.12, <0.14"
 
+# Internal dependencies
+oxigraph = { version = "0.4.0-alpha.3-dev", path = "lib/oxigraph" }
+oxrdf = { version = "0.2.0-alpha.2", path = "lib/oxrdf" }
+oxrdfio = { version = "0.1.0-alpha.2", path = "lib/oxrdfio" }
+oxrdfxml = { version = "0.1.0-alpha.2", path = "lib/oxrdfxml" }
+oxrocksdb-sys = { version = "0.4.0-alpha.3-dev", path = "./oxrocksdb-sys" }
+oxsdatatypes = { version = "0.2.0-alpha.1", path = "lib/oxsdatatypes" }
+oxttl = { version = "0.1.0-alpha.2", path = "lib/oxttl" }
+sparesults = { version = "0.2.0-alpha.2", path = "lib/sparesults" }
+spargebra = { version = "0.3.0-alpha.2", path = "lib/spargebra" }
+sparopt = { version = "0.1.0-alpha.2", path = "lib/sparopt" }
+sparql-smith = { version = "0.1.0-alpha.5", path = "lib/sparql-smith" }
+
 [workspace.lints.rust]
 absolute_paths_not_starting_with_crate = "warn"
 elided_lifetimes_in_paths = "warn"
diff --git a/lib/oxrdf/Cargo.toml b/lib/oxrdf/Cargo.toml
index 5acda6b6..90b2bb12 100644
--- a/lib/oxrdf/Cargo.toml
+++ b/lib/oxrdf/Cargo.toml
@@ -28,4 +28,4 @@ workspace = true
 
 [package.metadata.docs.rs]
 all-features = true
-rustdoc-args = ["--cfg", "docsrs"]
\ No newline at end of file
+rustdoc-args = ["--cfg", "docsrs"]
diff --git a/testsuite/Cargo.toml b/testsuite/Cargo.toml
index 6218880d..1302d710 100644
--- a/testsuite/Cargo.toml
+++ b/testsuite/Cargo.toml
@@ -28,4 +28,4 @@ workspace = true
 
 [[bench]]
 name = "parser"
-harness = false
\ No newline at end of file
+harness = false