Fork of https://github.com/oxigraph/oxigraph.git for the purpose of NextGraph project
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402 lines
14 KiB
402 lines
14 KiB
use byteorder::{NetworkEndian, ReadBytesExt, WriteBytesExt};
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use errors::*;
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use model::*;
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use std::io::Cursor;
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use std::io::Read;
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use std::io::Write;
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use std::mem::size_of;
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use std::ops::Deref;
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use std::str;
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use std::str::FromStr;
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use url::Url;
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use uuid::Uuid;
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pub trait BytesStore {
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type BytesOutput: Deref<Target = [u8]>;
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fn put(&self, value: &[u8]) -> Result<u64>;
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fn get(&self, id: u64) -> Result<Option<Self::BytesOutput>>;
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}
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const TYPE_NAMED_NODE_ID: u8 = 1;
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const TYPE_BLANK_NODE_ID: u8 = 2;
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const TYPE_LANG_STRING_LITERAL_ID: u8 = 3;
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const TYPE_TYPED_LITERAL_ID: u8 = 4;
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#[derive(Eq, PartialEq, Ord, PartialOrd, Debug, Clone, Hash)]
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pub enum EncodedTerm {
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NamedNode { iri_id: u64 },
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BlankNode(Uuid),
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LangStringLiteral { value_id: u64, language_id: u64 },
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TypedLiteral { value_id: u64, datatype_id: u64 },
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}
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impl EncodedTerm {
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pub fn read(reader: &mut impl Read) -> Result<Self> {
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let type_id = reader.read_u8()?;
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match type_id {
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TYPE_NAMED_NODE_ID => Ok(EncodedTerm::NamedNode {
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iri_id: reader.read_u64::<NetworkEndian>()?,
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}),
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TYPE_BLANK_NODE_ID => {
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let mut uuid_buffer = [0 as u8; 16];
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reader.read_exact(&mut uuid_buffer)?;
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Ok(EncodedTerm::BlankNode(Uuid::from_bytes(&uuid_buffer)?))
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}
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TYPE_LANG_STRING_LITERAL_ID => Ok(EncodedTerm::LangStringLiteral {
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language_id: reader.read_u64::<NetworkEndian>()?,
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value_id: reader.read_u64::<NetworkEndian>()?,
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}),
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TYPE_TYPED_LITERAL_ID => Ok(EncodedTerm::TypedLiteral {
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datatype_id: reader.read_u64::<NetworkEndian>()?,
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value_id: reader.read_u64::<NetworkEndian>()?,
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}),
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_ => Err("the term buffer has an invalid type id".into()),
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}
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}
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pub fn encoding_size(&self) -> usize {
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Self::type_length(self.type_id()).unwrap() //It is not possible to fail here
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}
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fn type_id(&self) -> u8 {
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match self {
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EncodedTerm::NamedNode { .. } => TYPE_NAMED_NODE_ID,
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EncodedTerm::BlankNode(_) => TYPE_BLANK_NODE_ID,
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EncodedTerm::LangStringLiteral { .. } => TYPE_LANG_STRING_LITERAL_ID,
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EncodedTerm::TypedLiteral { .. } => TYPE_TYPED_LITERAL_ID,
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}
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}
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fn type_length(type_id: u8) -> Result<usize> {
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//TODO: useful
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match type_id {
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TYPE_NAMED_NODE_ID => Ok(1 + size_of::<u64>()),
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TYPE_BLANK_NODE_ID => Ok(17), //TODO: guess
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TYPE_LANG_STRING_LITERAL_ID => Ok(1 + 2 * size_of::<u64>()),
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TYPE_TYPED_LITERAL_ID => Ok(1 + 2 * size_of::<u64>()),
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_ => Err(format!("{} is not a known type id", type_id).into()),
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}
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}
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pub fn write(&self, writer: &mut impl Write) -> Result<()> {
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writer.write_u8(self.type_id())?;
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match self {
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EncodedTerm::NamedNode { iri_id } => writer.write_u64::<NetworkEndian>(*iri_id)?,
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EncodedTerm::BlankNode(id) => writer.write_all(id.as_bytes())?,
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EncodedTerm::LangStringLiteral {
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value_id,
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language_id,
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} => {
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writer.write_u64::<NetworkEndian>(*language_id)?;
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writer.write_u64::<NetworkEndian>(*value_id)?;
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}
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EncodedTerm::TypedLiteral {
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value_id,
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datatype_id,
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} => {
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writer.write_u64::<NetworkEndian>(*datatype_id)?;
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writer.write_u64::<NetworkEndian>(*value_id)?;
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}
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}
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Ok(())
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}
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}
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#[derive(Eq, PartialEq, Ord, PartialOrd, Debug, Clone, Hash)]
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pub struct EncodedQuad {
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pub subject: EncodedTerm,
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pub predicate: EncodedTerm,
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pub object: EncodedTerm,
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pub graph_name: Option<EncodedTerm>,
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}
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impl EncodedQuad {
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pub fn new_from_spog_buffer(buffer: &[u8]) -> Result<Self> {
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let mut cursor = Cursor::new(buffer);
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let subject = EncodedTerm::read(&mut cursor)?;
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let predicate = EncodedTerm::read(&mut cursor)?;
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let object = EncodedTerm::read(&mut cursor)?;
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let graph_name = if cursor.position() < buffer.len() as u64 {
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Some(EncodedTerm::read(&mut cursor)?)
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} else {
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None
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};
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Ok(Self {
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subject,
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predicate,
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object,
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graph_name,
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})
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}
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pub fn new_from_posg_buffer(buffer: &[u8]) -> Result<Self> {
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let mut cursor = Cursor::new(buffer);
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let predicate = EncodedTerm::read(&mut cursor)?;
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let object = EncodedTerm::read(&mut cursor)?;
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let subject = EncodedTerm::read(&mut cursor)?;
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let graph_name = if cursor.position() < buffer.len() as u64 {
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Some(EncodedTerm::read(&mut cursor)?)
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} else {
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None
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};
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Ok(Self {
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subject,
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predicate,
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object,
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graph_name,
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})
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}
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pub fn new_from_ospg_buffer(buffer: &[u8]) -> Result<Self> {
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let mut cursor = Cursor::new(buffer);
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let object = EncodedTerm::read(&mut cursor)?;
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let subject = EncodedTerm::read(&mut cursor)?;
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let predicate = EncodedTerm::read(&mut cursor)?;
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let graph_name = if cursor.position() < buffer.len() as u64 {
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Some(EncodedTerm::read(&mut cursor)?)
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} else {
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None
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};
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Ok(Self {
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subject,
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predicate,
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object,
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graph_name,
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})
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}
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pub fn spog(&self) -> Result<Vec<u8>> {
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let mut spog = Vec::with_capacity(self.encoding_size());
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self.subject.write(&mut spog)?;
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self.predicate.write(&mut spog)?;
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self.object.write(&mut spog)?;
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if let Some(ref graph_name) = self.graph_name {
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graph_name.write(&mut spog)?;
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}
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Ok(spog)
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}
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pub fn posg(&self) -> Result<Vec<u8>> {
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let mut posg = Vec::with_capacity(self.encoding_size());
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self.predicate.write(&mut posg)?;
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self.object.write(&mut posg)?;
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self.subject.write(&mut posg)?;
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if let Some(ref graph_name) = self.graph_name {
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graph_name.write(&mut posg)?;
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}
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Ok(posg)
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}
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pub fn ospg(&self) -> Result<Vec<u8>> {
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let mut ospg = Vec::with_capacity(self.encoding_size());
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self.object.write(&mut ospg)?;
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self.subject.write(&mut ospg)?;
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self.predicate.write(&mut ospg)?;
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if let Some(ref graph_name) = self.graph_name {
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graph_name.write(&mut ospg)?;
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}
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Ok(ospg)
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}
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fn encoding_size(&self) -> usize {
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self.subject.encoding_size() + self.predicate.encoding_size() + self.object.encoding_size()
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+ match self.graph_name {
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Some(ref graph_name) => graph_name.encoding_size(),
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None => 0,
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}
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}
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}
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pub struct Encoder<S: BytesStore> {
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string_store: S,
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}
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impl<S: BytesStore> Encoder<S> {
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pub fn new(string_store: S) -> Self {
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Self { string_store }
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}
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pub fn encode_named_node(&self, named_node: &NamedNode) -> Result<EncodedTerm> {
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Ok(EncodedTerm::NamedNode {
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iri_id: self.encode_str_value(named_node.as_str())?,
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})
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}
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pub fn encode_blank_node(&self, blank_node: &BlankNode) -> Result<EncodedTerm> {
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Ok(EncodedTerm::BlankNode(blank_node.deref().clone()))
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}
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pub fn encode_literal(&self, literal: &Literal) -> Result<EncodedTerm> {
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if let Some(language) = literal.language() {
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Ok(EncodedTerm::LangStringLiteral {
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value_id: self.encode_str_value(&literal.value())?,
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language_id: self.encode_str_value(language)?,
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})
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} else {
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Ok(EncodedTerm::TypedLiteral {
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value_id: self.encode_str_value(&literal.value())?,
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datatype_id: self.encode_str_value(literal.datatype().as_ref())?,
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})
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}
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}
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pub fn encode_named_or_blank_node(&self, term: &NamedOrBlankNode) -> Result<EncodedTerm> {
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match term {
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NamedOrBlankNode::NamedNode(named_node) => self.encode_named_node(named_node),
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NamedOrBlankNode::BlankNode(blank_node) => self.encode_blank_node(blank_node),
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}
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}
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pub fn encode_term(&self, term: &Term) -> Result<EncodedTerm> {
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match term {
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Term::NamedNode(named_node) => self.encode_named_node(named_node),
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Term::BlankNode(blank_node) => self.encode_blank_node(blank_node),
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Term::Literal(literal) => self.encode_literal(literal),
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}
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}
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pub fn encode_quad(&self, quad: &Quad) -> Result<EncodedQuad> {
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Ok(EncodedQuad {
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subject: self.encode_named_or_blank_node(quad.subject())?,
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predicate: self.encode_named_node(quad.predicate())?,
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object: self.encode_term(quad.object())?,
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graph_name: match quad.graph_name() {
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Some(graph_name) => Some(self.encode_named_or_blank_node(&graph_name)?),
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None => None,
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},
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})
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}
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pub fn decode_term(&self, encoded: &EncodedTerm) -> Result<Term> {
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match encoded {
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EncodedTerm::NamedNode { iri_id } => {
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Ok(NamedNode::from(self.decode_url_value(*iri_id)?).into())
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}
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EncodedTerm::BlankNode(id) => Ok(BlankNode::from(*id).into()),
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EncodedTerm::LangStringLiteral {
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value_id,
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language_id,
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} => Ok(Literal::new_language_tagged_literal(
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self.decode_str_value(*value_id)?,
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self.decode_str_value(*language_id)?,
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).into()),
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EncodedTerm::TypedLiteral {
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value_id,
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datatype_id,
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} => Ok(Literal::new_typed_literal(
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self.decode_str_value(*value_id)?,
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NamedNode::from(self.decode_url_value(*datatype_id)?),
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).into()),
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}
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}
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pub fn decode_named_or_blank_node(&self, encoded: &EncodedTerm) -> Result<NamedOrBlankNode> {
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match self.decode_term(encoded)? {
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Term::NamedNode(named_node) => Ok(named_node.into()),
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Term::BlankNode(blank_node) => Ok(blank_node.into()),
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Term::Literal(_) => Err("A literal has ben found instead of a named node".into()),
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}
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}
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pub fn decode_named_node(&self, encoded: &EncodedTerm) -> Result<NamedNode> {
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match self.decode_term(encoded)? {
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Term::NamedNode(named_node) => Ok(named_node),
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Term::BlankNode(_) => Err("A blank node has been found instead of a named node".into()),
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Term::Literal(_) => Err("A literal has ben found instead of a named node".into()),
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}
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}
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pub fn decode_quad(&self, encoded: &EncodedQuad) -> Result<Quad> {
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Ok(Quad::new(
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self.decode_named_or_blank_node(&encoded.subject)?,
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self.decode_named_node(&encoded.predicate)?,
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self.decode_term(&encoded.object)?,
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match encoded.graph_name {
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Some(ref graph_name) => Some(self.decode_named_or_blank_node(&graph_name)?),
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None => None,
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},
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))
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}
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fn encode_str_value(&self, text: &str) -> Result<u64> {
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self.string_store.put(text.as_bytes())
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}
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fn decode_url_value(&self, id: u64) -> Result<Url> {
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let bytes = self.decode_value(id)?;
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Ok(Url::from_str(str::from_utf8(&bytes)?)?)
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}
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fn decode_str_value(&self, id: u64) -> Result<String> {
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let bytes = self.decode_value(id)?;
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Ok(str::from_utf8(&bytes)?.to_owned())
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}
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fn decode_value(&self, id: u64) -> Result<S::BytesOutput> {
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self.string_store
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.get(id)?
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.ok_or("value not found in the dictionary".into())
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}
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}
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impl<S: BytesStore + Default> Default for Encoder<S> {
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fn default() -> Self {
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Self {
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string_store: S::default(),
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}
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}
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}
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mod test {
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use std::cell::RefCell;
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use std::collections::BTreeMap;
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use store::numeric_encoder::*;
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#[derive(Default)]
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struct MemoryBytesStore {
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id2str: RefCell<BTreeMap<u64, Vec<u8>>>,
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str2id: RefCell<BTreeMap<Vec<u8>, u64>>,
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}
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impl BytesStore for MemoryBytesStore {
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type BytesOutput = Vec<u8>;
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fn put(&self, value: &[u8]) -> Result<u64> {
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let mut str2id = self.str2id.borrow_mut();
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let mut id2str = self.id2str.borrow_mut();
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let id = str2id.entry(value.to_vec()).or_insert_with(|| {
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let id = id2str.len() as u64;
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id2str.insert(id, value.to_vec());
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id
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});
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Ok(*id)
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}
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fn get(&self, id: u64) -> Result<Option<Vec<u8>>> {
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Ok(self.id2str.borrow().get(&id).map(|s| s.to_owned()))
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}
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}
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#[test]
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fn test_encoding() {
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use model::*;
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let encoder: Encoder<MemoryBytesStore> = Encoder::default();
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let terms: Vec<Term> = vec![
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NamedNode::from_str("http://foo.com").unwrap().into(),
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NamedNode::from_str("http://bar.com").unwrap().into(),
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NamedNode::from_str("http://foo.com").unwrap().into(),
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BlankNode::default().into(),
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Literal::from(true).into(),
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Literal::from(1.2).into(),
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Literal::from("foo").into(),
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Literal::new_language_tagged_literal("foo", "fr").into(),
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];
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for term in terms {
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let encoded = encoder.encode_term(&term).unwrap();
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assert_eq!(term, encoder.decode_term(&encoded).unwrap())
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}
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}
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}
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