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rocksdb/db/builder.cc

473 lines
19 KiB

// Copyright (c) 2011-present, Facebook, Inc. All rights reserved.
// This source code is licensed under both the GPLv2 (found in the
// COPYING file in the root directory) and Apache 2.0 License
// (found in the LICENSE.Apache file in the root directory).
//
// Copyright (c) 2011 The LevelDB Authors. All rights reserved.
// Use of this source code is governed by a BSD-style license that can be
// found in the LICENSE file. See the AUTHORS file for names of contributors.
#include "db/builder.h"
#include <algorithm>
#include <deque>
#include <vector>
#include "db/blob/blob_file_builder.h"
#include "db/compaction/compaction_iterator.h"
Logically strip timestamp during flush (#11557) Summary: Logically strip the user-defined timestamp when L0 files are created during flush when `AdvancedColumnFamilyOptions.persist_user_defined_timestamps` is false. Logically stripping timestamp here means replacing the original user-defined timestamp with a mininum timestamp, which for now is hard coded to be all zeros bytes. While working on this, I caught a missing piece on the `BlockBuilder` level for this feature. The current quick path `std::min(buffer_size, last_key_size)` needs a bit tweaking to work for this feature. When user-defined timestamp is stripped during block building, on writing first entry or right after resetting, `buffer` is empty and `buffer_size` is zero as usual. However, in follow-up writes, depending on the size of the stripped user-defined timestamp, and the size of the value, what's in `buffer` can sometimes be smaller than `last_key_size`, leading `std::min(buffer_size, last_key_size)` to truncate the `last_key`. Previous test doesn't caught the bug because in those tests, the size of the stripped user-defined timestamps bytes is smaller than the length of the value. In order to avoid the conditional operation, this PR changed the original trivial `std::min` operation into an arithmetic operation. Since this is a change in a hot and performance critical path, I did the following benchmark to check no observable regression is introduced. ```TEST_TMPDIR=/dev/shm/rocksdb1 ./db_bench -benchmarks=fillseq -memtablerep=vector -allow_concurrent_memtable_write=false -num=50000000``` Compiled with DEBUG_LEVEL=0 Test vs. control runs simulaneous for better accuracy, units = ops/sec PR vs base: Round 1: 350652 vs 349055 Round 2: 365733 vs 364308 Round 3: 355681 vs 354475 Pull Request resolved: https://github.com/facebook/rocksdb/pull/11557 Test Plan: New timestamp specific test added or existing tests augmented, both are parameterized with `UserDefinedTimestampTestMode`: `UserDefinedTimestampTestMode::kNormal` -> UDT feature enabled, write / read with min timestamp `UserDefinedTimestampTestMode::kStripUserDefinedTimestamps` -> UDT feature enabled, write / read with min timestamp, set Options.persist_user_defined_timestamps to false. ``` make all check ./db_wal_test --gtest_filter="*WithTimestamp*" ./flush_job_test --gtest_filter="*WithTimestamp*" ./repair_test --gtest_filter="*WithTimestamp*" ./block_based_table_reader_test ``` Reviewed By: pdillinger Differential Revision: D47027664 Pulled By: jowlyzhang fbshipit-source-id: e729193b6334dfc63aaa736d684d907a022571f5
1 year ago
#include "db/dbformat.h"
#include "db/event_helpers.h"
#include "db/internal_stats.h"
#include "db/merge_helper.h"
#include "db/output_validator.h"
#include "db/range_del_aggregator.h"
#include "db/table_cache.h"
#include "db/version_edit.h"
#include "file/file_util.h"
#include "file/filename.h"
#include "file/read_write_util.h"
#include "file/writable_file_writer.h"
#include "monitoring/iostats_context_imp.h"
#include "monitoring/thread_status_util.h"
#include "options/options_helper.h"
#include "rocksdb/db.h"
#include "rocksdb/env.h"
#include "rocksdb/iterator.h"
#include "rocksdb/options.h"
#include "rocksdb/table.h"
#include "table/block_based/block_based_table_builder.h"
#include "table/format.h"
#include "table/internal_iterator.h"
#include "table/unique_id_impl.h"
#include "test_util/sync_point.h"
#include "util/stop_watch.h"
namespace ROCKSDB_NAMESPACE {
class TableFactory;
TableBuilder* NewTableBuilder(const TableBuilderOptions& tboptions,
WritableFileWriter* file) {
assert((tboptions.column_family_id ==
TablePropertiesCollectorFactory::Context::kUnknownColumnFamily) ==
tboptions.column_family_name.empty());
return tboptions.ioptions.table_factory->NewTableBuilder(tboptions, file);
}
Status BuildTable(
const std::string& dbname, VersionSet* versions,
const ImmutableDBOptions& db_options, const TableBuilderOptions& tboptions,
Group rocksdb.sst.read.micros stat by IOActivity flush and compaction (#11288) Summary: **Context:** The existing stat rocksdb.sst.read.micros does not reflect each of compaction and flush cases but aggregate them, which is not so helpful for us to understand IO read behavior of each of them. **Summary** - Update `StopWatch` and `RandomAccessFileReader` to record `rocksdb.sst.read.micros` and `rocksdb.file.{flush/compaction}.read.micros` - Fixed the default histogram in `RandomAccessFileReader` - New field `ReadOptions/IOOptions::io_activity`; Pass `ReadOptions` through paths under db open, flush and compaction to where we can prepare `IOOptions` and pass it to `RandomAccessFileReader` - Use `thread_status_util` for assertion in `DbStressFSWrapper` for continuous testing on we are passing correct `io_activity` under db open, flush and compaction Pull Request resolved: https://github.com/facebook/rocksdb/pull/11288 Test Plan: - **Stress test** - **Db bench 1: rocksdb.sst.read.micros COUNT ≈ sum of rocksdb.file.read.flush.micros's and rocksdb.file.read.compaction.micros's.** (without blob) - May not be exactly the same due to `HistogramStat::Add` only guarantees atomic not accuracy across threads. ``` ./db_bench -db=/dev/shm/testdb/ -statistics=true -benchmarks="fillseq" -key_size=32 -value_size=512 -num=50000 -write_buffer_size=655 -target_file_size_base=655 -disable_auto_compactions=false -compression_type=none -bloom_bits=3 (-use_plain_table=1 -prefix_size=10) ``` ``` // BlockBasedTable rocksdb.sst.read.micros P50 : 2.009374 P95 : 4.968548 P99 : 8.110362 P100 : 43.000000 COUNT : 40456 SUM : 114805 rocksdb.file.read.flush.micros P50 : 1.871841 P95 : 3.872407 P99 : 5.540541 P100 : 43.000000 COUNT : 2250 SUM : 6116 rocksdb.file.read.compaction.micros P50 : 2.023109 P95 : 5.029149 P99 : 8.196910 P100 : 26.000000 COUNT : 38206 SUM : 108689 // PlainTable Does not apply ``` - **Db bench 2: performance** **Read** SETUP: db with 900 files ``` ./db_bench -db=/dev/shm/testdb/ -benchmarks="fillseq" -key_size=32 -value_size=512 -num=50000 -write_buffer_size=655 -disable_auto_compactions=true -target_file_size_base=655 -compression_type=none ```run till convergence ``` ./db_bench -seed=1678564177044286 -use_existing_db=true -db=/dev/shm/testdb -benchmarks=readrandom[-X60] -statistics=true -num=1000000 -disable_auto_compactions=true -compression_type=none -bloom_bits=3 ``` Pre-change `readrandom [AVG 60 runs] : 21568 (± 248) ops/sec` Post-change (no regression, -0.3%) `readrandom [AVG 60 runs] : 21486 (± 236) ops/sec` **Compaction/Flush**run till convergence ``` ./db_bench -db=/dev/shm/testdb2/ -seed=1678564177044286 -benchmarks="fillseq[-X60]" -key_size=32 -value_size=512 -num=50000 -write_buffer_size=655 -disable_auto_compactions=false -target_file_size_base=655 -compression_type=none rocksdb.sst.read.micros COUNT : 33820 rocksdb.sst.read.flush.micros COUNT : 1800 rocksdb.sst.read.compaction.micros COUNT : 32020 ``` Pre-change `fillseq [AVG 46 runs] : 1391 (± 214) ops/sec; 0.7 (± 0.1) MB/sec` Post-change (no regression, ~-0.4%) `fillseq [AVG 46 runs] : 1385 (± 216) ops/sec; 0.7 (± 0.1) MB/sec` Reviewed By: ajkr Differential Revision: D44007011 Pulled By: hx235 fbshipit-source-id: a54c89e4846dfc9a135389edf3f3eedfea257132
2 years ago
const FileOptions& file_options, const ReadOptions& read_options,
TableCache* table_cache, InternalIterator* iter,
std::vector<std::unique_ptr<FragmentedRangeTombstoneIterator>>
range_del_iters,
FileMetaData* meta, std::vector<BlobFileAddition>* blob_file_additions,
std::vector<SequenceNumber> snapshots,
SequenceNumber earliest_write_conflict_snapshot,
CompactionIterator sees consistent view of which keys are committed (#9830) Summary: **This PR does not affect the functionality of `DB` and write-committed transactions.** `CompactionIterator` uses `KeyCommitted(seq)` to determine if a key in the database is committed. As the name 'write-committed' implies, if write-committed policy is used, a key exists in the database only if it is committed. In fact, the implementation of `KeyCommitted()` is as follows: ``` inline bool KeyCommitted(SequenceNumber seq) { // For non-txn-db and write-committed, snapshot_checker_ is always nullptr. return snapshot_checker_ == nullptr || snapshot_checker_->CheckInSnapshot(seq, kMaxSequence) == SnapshotCheckerResult::kInSnapshot; } ``` With that being said, we focus on write-prepared/write-unprepared transactions. A few notes: - A key can exist in the db even if it's uncommitted. Therefore, we rely on `snapshot_checker_` to determine data visibility. We also require that all writes go through transaction API instead of the raw `WriteBatch` + `Write`, thus at most one uncommitted version of one user key can exist in the database. - `CompactionIterator` outputs a key as long as the key is uncommitted. Due to the above reasons, it is possible that `CompactionIterator` decides to output an uncommitted key without doing further checks on the key (`NextFromInput()`). By the time the key is being prepared for output, the key becomes committed because the `snapshot_checker_(seq, kMaxSequence)` becomes true in the implementation of `KeyCommitted()`. Then `CompactionIterator` will try to zero its sequence number and hit assertion error if the key is a tombstone. To fix this issue, we should make the `CompactionIterator` see a consistent view of the input keys. Note that for write-prepared/write-unprepared, the background flush/compaction jobs already take a "job snapshot" before starting processing keys. The job snapshot is released only after the entire flush/compaction finishes. We can use this snapshot to determine whether a key is committed or not with minor change to `KeyCommitted()`. ``` inline bool KeyCommitted(SequenceNumber sequence) { // For non-txn-db and write-committed, snapshot_checker_ is always nullptr. return snapshot_checker_ == nullptr || snapshot_checker_->CheckInSnapshot(sequence, job_snapshot_) == SnapshotCheckerResult::kInSnapshot; } ``` As a result, whether a key is committed or not will remain a constant throughout compaction, causing no trouble for `CompactionIterator`s assertions. Pull Request resolved: https://github.com/facebook/rocksdb/pull/9830 Test Plan: make check Reviewed By: ltamasi Differential Revision: D35561162 Pulled By: riversand963 fbshipit-source-id: 0e00d200c195240341cfe6d34cbc86798b315b9f
3 years ago
SequenceNumber job_snapshot, SnapshotChecker* snapshot_checker,
bool paranoid_file_checks, InternalStats* internal_stats,
IOStatus* io_status, const std::shared_ptr<IOTracer>& io_tracer,
BlobFileCreationReason blob_creation_reason,
const SeqnoToTimeMapping& seqno_to_time_mapping, EventLogger* event_logger,
Add more LSM info to FilterBuildingContext (#8246) Summary: Add `num_levels`, `is_bottommost`, and table file creation `reason` to `FilterBuildingContext`, in anticipation of more powerful Bloom-like filter support. To support this, added `is_bottommost` and `reason` to `TableBuilderOptions`, which allowed removing `reason` parameter from `rocksdb::BuildTable`. I attempted to remove `skip_filters` from `TableBuilderOptions`, because filter construction decisions should arise from options, not one-off parameters. I could not completely remove it because the public API for SstFileWriter takes a `skip_filters` parameter, and translating this into an option change would mean awkwardly replacing the table_factory if it is BlockBasedTableFactory with new filter_policy=nullptr option. I marked this public skip_filters option as deprecated because of this oddity. (skip_filters on the read side probably makes sense.) At least `skip_filters` is now largely hidden for users of `TableBuilderOptions` and is no longer used for implementing the optimize_filters_for_hits option. Bringing the logic for that option closer to handling of FilterBuildingContext makes it more obvious that hese two are using the same notion of "bottommost." (Planned: configuration options for Bloom-like filters that generalize `optimize_filters_for_hits`) Recommended follow-up: Try to get away from "bottommost level" naming of things, which is inaccurate (see VersionStorageInfo::RangeMightExistAfterSortedRun), and move to "bottommost run" or just "bottommost." Pull Request resolved: https://github.com/facebook/rocksdb/pull/8246 Test Plan: extended an existing unit test to exercise and check various filter building contexts. Also, existing tests for optimize_filters_for_hits validate some of the "bottommost" handling, which is now closely connected to FilterBuildingContext::is_bottommost through TableBuilderOptions::is_bottommost Reviewed By: mrambacher Differential Revision: D28099346 Pulled By: pdillinger fbshipit-source-id: 2c1072e29c24d4ac404c761a7b7663292372600a
4 years ago
int job_id, const Env::IOPriority io_priority,
TableProperties* table_properties, Env::WriteLifeTimeHint write_hint,
const std::string* full_history_ts_low,
Include estimated bytes deleted by range tombstones in compensated file size (#10734) Summary: compensate file sizes in compaction picking so files with range tombstones are preferred, such that they get compacted down earlier as they tend to delete a lot of data. This PR adds a `compensated_range_deletion_size` field in FileMeta that is computed during Flush/Compaction and persisted in MANIFEST. This value is added to `compensated_file_size` which will be used for compaction picking. Currently, for a file in level L, `compensated_range_deletion_size` is set to the estimated bytes deleted by range tombstone of this file in all levels > L. This helps to reduce space amp when data in older levels are covered by range tombstones in level L. Pull Request resolved: https://github.com/facebook/rocksdb/pull/10734 Test Plan: - Added unit tests. - benchmark to check if the above definition `compensated_range_deletion_size` is reducing space amp as intended, without affecting write amp too much. The experiment set up favorable for this optimization: large range tombstone issued infrequently. Command used: ``` ./db_bench -benchmarks=fillrandom,waitforcompaction,stats,levelstats -use_existing_db=false -avoid_flush_during_recovery=true -write_buffer_size=33554432 -level_compaction_dynamic_level_bytes=true -max_background_jobs=8 -max_bytes_for_level_base=134217728 -target_file_size_base=33554432 -writes_per_range_tombstone=500000 -range_tombstone_width=5000000 -num=50000000 -benchmark_write_rate_limit=8388608 -threads=16 -duration=1800 --max_num_range_tombstones=1000000000 ``` In this experiment, each thread wrote 16 range tombstones over the duration of 30 minutes, each range tombstone has width 5M that is the 10% of the key space width. Results shows this PR generates a smaller DB size. Compaction stats from this PR: ``` Level Files Size Score Read(GB) Rn(GB) Rnp1(GB) Write(GB) Wnew(GB) Moved(GB) W-Amp Rd(MB/s) Wr(MB/s) Comp(sec) CompMergeCPU(sec) Comp(cnt) Avg(sec) KeyIn KeyDrop Rblob(GB) Wblob(GB) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ L0 2/0 31.54 MB 0.5 0.0 0.0 0.0 8.4 8.4 0.0 1.0 0.0 63.4 135.56 110.94 544 0.249 0 0 0.0 0.0 L4 3/0 96.55 MB 0.8 18.5 6.7 11.8 18.4 6.6 0.0 2.7 65.3 64.9 290.08 284.03 108 2.686 284M 1957K 0.0 0.0 L5 15/0 404.41 MB 1.0 19.1 7.7 11.4 18.8 7.4 0.3 2.5 66.6 65.7 292.93 285.34 220 1.332 293M 3808K 0.0 0.0 L6 143/0 4.12 GB 0.0 45.0 7.5 37.5 41.6 4.1 0.0 5.5 71.2 65.9 647.00 632.66 251 2.578 739M 47M 0.0 0.0 Sum 163/0 4.64 GB 0.0 82.6 21.9 60.7 87.2 26.5 0.3 10.4 61.9 65.4 1365.58 1312.97 1123 1.216 1318M 52M 0.0 0.0 ``` Compaction stats from main: ``` Level Files Size Score Read(GB) Rn(GB) Rnp1(GB) Write(GB) Wnew(GB) Moved(GB) W-Amp Rd(MB/s) Wr(MB/s) Comp(sec) CompMergeCPU(sec) Comp(cnt) Avg(sec) KeyIn KeyDrop Rblob(GB) Wblob(GB) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ L0 0/0 0.00 KB 0.0 0.0 0.0 0.0 8.4 8.4 0.0 1.0 0.0 60.5 142.12 115.89 569 0.250 0 0 0.0 0.0 L4 3/0 85.68 MB 1.0 17.7 6.8 10.9 17.6 6.7 0.0 2.6 62.7 62.3 289.05 281.79 112 2.581 272M 2309K 0.0 0.0 L5 11/0 293.73 MB 1.0 18.8 7.5 11.2 18.5 7.2 0.5 2.5 64.9 63.9 296.07 288.50 220 1.346 288M 4365K 0.0 0.0 L6 130/0 3.94 GB 0.0 51.5 7.6 43.9 47.9 3.9 0.0 6.3 67.2 62.4 784.95 765.92 258 3.042 848M 51M 0.0 0.0 Sum 144/0 4.31 GB 0.0 88.0 21.9 66.0 92.3 26.3 0.5 11.0 59.6 62.5 1512.19 1452.09 1159 1.305 1409M 58M 0.0 0.0``` Reviewed By: ajkr Differential Revision: D39834713 Pulled By: cbi42 fbshipit-source-id: fe9341040b8704a8fbb10cad5cf5c43e962c7e6b
2 years ago
BlobFileCompletionCallback* blob_callback, Version* version,
uint64_t* num_input_entries, uint64_t* memtable_payload_bytes,
uint64_t* memtable_garbage_bytes) {
assert((tboptions.column_family_id ==
TablePropertiesCollectorFactory::Context::kUnknownColumnFamily) ==
tboptions.column_family_name.empty());
auto& mutable_cf_options = tboptions.moptions;
auto& ioptions = tboptions.ioptions;
// Reports the IOStats for flush for every following bytes.
const size_t kReportFlushIOStatsEvery = 1048576;
OutputValidator output_validator(
tboptions.internal_comparator,
/*enable_order_check=*/
mutable_cf_options.check_flush_compaction_key_order,
/*enable_hash=*/paranoid_file_checks);
Status s;
meta->fd.file_size = 0;
iter->SeekToFirst();
std::unique_ptr<CompactionRangeDelAggregator> range_del_agg(
new CompactionRangeDelAggregator(&tboptions.internal_comparator,
User-defined timestamp support for `DeleteRange()` (#10661) Summary: Add user-defined timestamp support for range deletion. The new API is `DeleteRange(opt, cf, begin_key, end_key, ts)`. Most of the change is to update the comparator to compare without timestamp. Other than that, major changes are - internal range tombstone data structures (`FragmentedRangeTombstoneList`, `RangeTombstone`, etc.) to store timestamps. - Garbage collection of range tombstones and range tombstone covered keys during compaction. - Get()/MultiGet() to return the timestamp of a range tombstone when needed. - Get/Iterator with range tombstones bounded by readoptions.timestamp. - timestamp crash test now issues DeleteRange by default. Pull Request resolved: https://github.com/facebook/rocksdb/pull/10661 Test Plan: - Added unit test: `make check` - Stress test: `python3 tools/db_crashtest.py --enable_ts whitebox --readpercent=57 --prefixpercent=4 --writepercent=25 -delpercent=5 --iterpercent=5 --delrangepercent=4` - Ran `db_bench` to measure regression when timestamp is not enabled. The tests are for write (with some range deletion) and iterate with DB fitting in memory: `./db_bench--benchmarks=fillrandom,seekrandom --writes_per_range_tombstone=200 --max_write_buffer_number=100 --min_write_buffer_number_to_merge=100 --writes=500000 --reads=500000 --seek_nexts=10 --disable_auto_compactions -disable_wal=true --max_num_range_tombstones=1000`. Did not see consistent regression in no timestamp case. | micros/op | fillrandom | seekrandom | | --- | --- | --- | |main| 2.58 |10.96| |PR 10661| 2.68 |10.63| Reviewed By: riversand963 Differential Revision: D39441192 Pulled By: cbi42 fbshipit-source-id: f05aca3c41605caf110daf0ff405919f300ddec2
2 years ago
snapshots, full_history_ts_low));
uint64_t num_unfragmented_tombstones = 0;
Added memtable garbage statistics (#8411) Summary: **Summary**: 2 new statistics counters are added to RocksDB: `MEMTABLE_PAYLOAD_BYTES_AT_FLUSH` and `MEMTABLE_GARBAGE_BYTES_AT_FLUSH`. The former tracks how many raw bytes of useful data are present on the memtable at flush time, whereas the latter is tracks how many of these raw bytes are considered garbage, meaning that they ended up not being imported on the SSTables resulting from the flush operations. **Unit test**: run `make db_flush_test -j$(nproc); ./db_flush_test` to run the unit test. This executable includes 3 tests, that test support and correct stat calculations for workloads with inserts, deletes, and DeleteRanges. The parameters are set such that the workloads are performed on a single memtable, and a single SSTable is created as a result of the flush operation. The flush operation is manually called in the test file. The tests verify that the values of these 2 statistics counters introduced in this PR can be exactly predicted, showing that we have a full understanding of the underlying operations. **Performance testing**: `./db_bench -statistics -benchmarks=fillrandom -num=10000000` repeated 10 times. Timing done using "date" function in a bash script. _Results_: Original Rocksdb fork: mean 66.6 sec, std 1.18 sec. This feature branch: mean 67.4 sec, std 1.35 sec. Pull Request resolved: https://github.com/facebook/rocksdb/pull/8411 Reviewed By: akankshamahajan15 Differential Revision: D29150629 Pulled By: bjlemaire fbshipit-source-id: 7b3c2e86d50c6aa34fa50fd134282eacb543a5b1
3 years ago
uint64_t total_tombstone_payload_bytes = 0;
for (auto& range_del_iter : range_del_iters) {
num_unfragmented_tombstones +=
range_del_iter->num_unfragmented_tombstones();
Added memtable garbage statistics (#8411) Summary: **Summary**: 2 new statistics counters are added to RocksDB: `MEMTABLE_PAYLOAD_BYTES_AT_FLUSH` and `MEMTABLE_GARBAGE_BYTES_AT_FLUSH`. The former tracks how many raw bytes of useful data are present on the memtable at flush time, whereas the latter is tracks how many of these raw bytes are considered garbage, meaning that they ended up not being imported on the SSTables resulting from the flush operations. **Unit test**: run `make db_flush_test -j$(nproc); ./db_flush_test` to run the unit test. This executable includes 3 tests, that test support and correct stat calculations for workloads with inserts, deletes, and DeleteRanges. The parameters are set such that the workloads are performed on a single memtable, and a single SSTable is created as a result of the flush operation. The flush operation is manually called in the test file. The tests verify that the values of these 2 statistics counters introduced in this PR can be exactly predicted, showing that we have a full understanding of the underlying operations. **Performance testing**: `./db_bench -statistics -benchmarks=fillrandom -num=10000000` repeated 10 times. Timing done using "date" function in a bash script. _Results_: Original Rocksdb fork: mean 66.6 sec, std 1.18 sec. This feature branch: mean 67.4 sec, std 1.35 sec. Pull Request resolved: https://github.com/facebook/rocksdb/pull/8411 Reviewed By: akankshamahajan15 Differential Revision: D29150629 Pulled By: bjlemaire fbshipit-source-id: 7b3c2e86d50c6aa34fa50fd134282eacb543a5b1
3 years ago
total_tombstone_payload_bytes +=
range_del_iter->total_tombstone_payload_bytes();
range_del_agg->AddTombstones(std::move(range_del_iter));
}
std::string fname = TableFileName(ioptions.cf_paths, meta->fd.GetNumber(),
meta->fd.GetPathId());
std::vector<std::string> blob_file_paths;
std::string file_checksum = kUnknownFileChecksum;
std::string file_checksum_func_name = kUnknownFileChecksumFuncName;
EventHelpers::NotifyTableFileCreationStarted(ioptions.listeners, dbname,
tboptions.column_family_name,
Add more LSM info to FilterBuildingContext (#8246) Summary: Add `num_levels`, `is_bottommost`, and table file creation `reason` to `FilterBuildingContext`, in anticipation of more powerful Bloom-like filter support. To support this, added `is_bottommost` and `reason` to `TableBuilderOptions`, which allowed removing `reason` parameter from `rocksdb::BuildTable`. I attempted to remove `skip_filters` from `TableBuilderOptions`, because filter construction decisions should arise from options, not one-off parameters. I could not completely remove it because the public API for SstFileWriter takes a `skip_filters` parameter, and translating this into an option change would mean awkwardly replacing the table_factory if it is BlockBasedTableFactory with new filter_policy=nullptr option. I marked this public skip_filters option as deprecated because of this oddity. (skip_filters on the read side probably makes sense.) At least `skip_filters` is now largely hidden for users of `TableBuilderOptions` and is no longer used for implementing the optimize_filters_for_hits option. Bringing the logic for that option closer to handling of FilterBuildingContext makes it more obvious that hese two are using the same notion of "bottommost." (Planned: configuration options for Bloom-like filters that generalize `optimize_filters_for_hits`) Recommended follow-up: Try to get away from "bottommost level" naming of things, which is inaccurate (see VersionStorageInfo::RangeMightExistAfterSortedRun), and move to "bottommost run" or just "bottommost." Pull Request resolved: https://github.com/facebook/rocksdb/pull/8246 Test Plan: extended an existing unit test to exercise and check various filter building contexts. Also, existing tests for optimize_filters_for_hits validate some of the "bottommost" handling, which is now closely connected to FilterBuildingContext::is_bottommost through TableBuilderOptions::is_bottommost Reviewed By: mrambacher Differential Revision: D28099346 Pulled By: pdillinger fbshipit-source-id: 2c1072e29c24d4ac404c761a7b7663292372600a
4 years ago
fname, job_id, tboptions.reason);
Env* env = db_options.env;
assert(env);
FileSystem* fs = db_options.fs.get();
assert(fs);
TableProperties tp;
bool table_file_created = false;
if (iter->Valid() || !range_del_agg->IsEmpty()) {
std::unique_ptr<CompactionFilter> compaction_filter;
if (ioptions.compaction_filter_factory != nullptr &&
ioptions.compaction_filter_factory->ShouldFilterTableFileCreation(
tboptions.reason)) {
CompactionFilter::Context context;
context.is_full_compaction = false;
context.is_manual_compaction = false;
context.column_family_id = tboptions.column_family_id;
context.reason = tboptions.reason;
compaction_filter =
ioptions.compaction_filter_factory->CreateCompactionFilter(context);
if (compaction_filter != nullptr &&
!compaction_filter->IgnoreSnapshots()) {
s.PermitUncheckedError();
return Status::NotSupported(
"CompactionFilter::IgnoreSnapshots() = false is not supported "
"anymore.");
}
}
TableBuilder* builder;
std::unique_ptr<WritableFileWriter> file_writer;
{
Introduce a new storage specific Env API (#5761) Summary: The current Env API encompasses both storage/file operations, as well as OS related operations. Most of the APIs return a Status, which does not have enough metadata about an error, such as whether its retry-able or not, scope (i.e fault domain) of the error etc., that may be required in order to properly handle a storage error. The file APIs also do not provide enough control over the IO SLA, such as timeout, prioritization, hinting about placement and redundancy etc. This PR separates out the file/storage APIs from Env into a new FileSystem class. The APIs are updated to return an IOStatus with metadata about the error, as well as to take an IOOptions structure as input in order to allow more control over the IO. The user can set both ```options.env``` and ```options.file_system``` to specify that RocksDB should use the former for OS related operations and the latter for storage operations. Internally, a ```CompositeEnvWrapper``` has been introduced that inherits from ```Env``` and redirects individual methods to either an ```Env``` implementation or the ```FileSystem``` as appropriate. When options are sanitized during ```DB::Open```, ```options.env``` is replaced with a newly allocated ```CompositeEnvWrapper``` instance if both env and file_system have been specified. This way, the rest of the RocksDB code can continue to function as before. This PR also ports PosixEnv to the new API by splitting it into two - PosixEnv and PosixFileSystem. PosixEnv is defined as a sub-class of CompositeEnvWrapper, and threading/time functions are overridden with Posix specific implementations in order to avoid an extra level of indirection. The ```CompositeEnvWrapper``` translates ```IOStatus``` return code to ```Status```, and sets the severity to ```kSoftError``` if the io_status is retryable. The error handling code in RocksDB can then recover the DB automatically. Pull Request resolved: https://github.com/facebook/rocksdb/pull/5761 Differential Revision: D18868376 Pulled By: anand1976 fbshipit-source-id: 39efe18a162ea746fabac6360ff529baba48486f
5 years ago
std::unique_ptr<FSWritableFile> file;
#ifndef NDEBUG
Introduce a new storage specific Env API (#5761) Summary: The current Env API encompasses both storage/file operations, as well as OS related operations. Most of the APIs return a Status, which does not have enough metadata about an error, such as whether its retry-able or not, scope (i.e fault domain) of the error etc., that may be required in order to properly handle a storage error. The file APIs also do not provide enough control over the IO SLA, such as timeout, prioritization, hinting about placement and redundancy etc. This PR separates out the file/storage APIs from Env into a new FileSystem class. The APIs are updated to return an IOStatus with metadata about the error, as well as to take an IOOptions structure as input in order to allow more control over the IO. The user can set both ```options.env``` and ```options.file_system``` to specify that RocksDB should use the former for OS related operations and the latter for storage operations. Internally, a ```CompositeEnvWrapper``` has been introduced that inherits from ```Env``` and redirects individual methods to either an ```Env``` implementation or the ```FileSystem``` as appropriate. When options are sanitized during ```DB::Open```, ```options.env``` is replaced with a newly allocated ```CompositeEnvWrapper``` instance if both env and file_system have been specified. This way, the rest of the RocksDB code can continue to function as before. This PR also ports PosixEnv to the new API by splitting it into two - PosixEnv and PosixFileSystem. PosixEnv is defined as a sub-class of CompositeEnvWrapper, and threading/time functions are overridden with Posix specific implementations in order to avoid an extra level of indirection. The ```CompositeEnvWrapper``` translates ```IOStatus``` return code to ```Status```, and sets the severity to ```kSoftError``` if the io_status is retryable. The error handling code in RocksDB can then recover the DB automatically. Pull Request resolved: https://github.com/facebook/rocksdb/pull/5761 Differential Revision: D18868376 Pulled By: anand1976 fbshipit-source-id: 39efe18a162ea746fabac6360ff529baba48486f
5 years ago
bool use_direct_writes = file_options.use_direct_writes;
TEST_SYNC_POINT_CALLBACK("BuildTable:create_file", &use_direct_writes);
#endif // !NDEBUG
IOStatus io_s = NewWritableFile(fs, fname, &file, file_options);
assert(s.ok());
s = io_s;
if (io_status->ok()) {
*io_status = io_s;
}
if (!s.ok()) {
EventHelpers::LogAndNotifyTableFileCreationFinished(
event_logger, ioptions.listeners, dbname,
tboptions.column_family_name, fname, job_id, meta->fd,
Add more LSM info to FilterBuildingContext (#8246) Summary: Add `num_levels`, `is_bottommost`, and table file creation `reason` to `FilterBuildingContext`, in anticipation of more powerful Bloom-like filter support. To support this, added `is_bottommost` and `reason` to `TableBuilderOptions`, which allowed removing `reason` parameter from `rocksdb::BuildTable`. I attempted to remove `skip_filters` from `TableBuilderOptions`, because filter construction decisions should arise from options, not one-off parameters. I could not completely remove it because the public API for SstFileWriter takes a `skip_filters` parameter, and translating this into an option change would mean awkwardly replacing the table_factory if it is BlockBasedTableFactory with new filter_policy=nullptr option. I marked this public skip_filters option as deprecated because of this oddity. (skip_filters on the read side probably makes sense.) At least `skip_filters` is now largely hidden for users of `TableBuilderOptions` and is no longer used for implementing the optimize_filters_for_hits option. Bringing the logic for that option closer to handling of FilterBuildingContext makes it more obvious that hese two are using the same notion of "bottommost." (Planned: configuration options for Bloom-like filters that generalize `optimize_filters_for_hits`) Recommended follow-up: Try to get away from "bottommost level" naming of things, which is inaccurate (see VersionStorageInfo::RangeMightExistAfterSortedRun), and move to "bottommost run" or just "bottommost." Pull Request resolved: https://github.com/facebook/rocksdb/pull/8246 Test Plan: extended an existing unit test to exercise and check various filter building contexts. Also, existing tests for optimize_filters_for_hits validate some of the "bottommost" handling, which is now closely connected to FilterBuildingContext::is_bottommost through TableBuilderOptions::is_bottommost Reviewed By: mrambacher Differential Revision: D28099346 Pulled By: pdillinger fbshipit-source-id: 2c1072e29c24d4ac404c761a7b7663292372600a
4 years ago
kInvalidBlobFileNumber, tp, tboptions.reason, s, file_checksum,
file_checksum_func_name);
return s;
}
table_file_created = true;
FileTypeSet tmp_set = ioptions.checksum_handoff_file_types;
file->SetIOPriority(io_priority);
file->SetWriteLifeTimeHint(write_hint);
file_writer.reset(new WritableFileWriter(
std::move(file), fname, file_options, ioptions.clock, io_tracer,
ioptions.stats, ioptions.listeners,
ioptions.file_checksum_gen_factory.get(),
Using existing crc32c checksum in checksum handoff for Manifest and WAL (#8412) Summary: In PR https://github.com/facebook/rocksdb/issues/7523 , checksum handoff is introduced in RocksDB for WAL, Manifest, and SST files. When user enable checksum handoff for a certain type of file, before the data is written to the lower layer storage system, we calculate the checksum (crc32c) of each piece of data and pass the checksum down with the data, such that data verification can be down by the lower layer storage system if it has the capability. However, it cannot cover the whole lifetime of the data in the memory and also it potentially introduces extra checksum calculation overhead. In this PR, we introduce a new interface in WritableFileWriter::Append, which allows the caller be able to pass the data and the checksum (crc32c) together. In this way, WritableFileWriter can directly use the pass-in checksum (crc32c) to generate the checksum of data being passed down to the storage system. It saves the calculation overhead and achieves higher protection coverage. When a new checksum is added with the data, we use Crc32cCombine https://github.com/facebook/rocksdb/issues/8305 to combine the existing checksum and the new checksum. To avoid the segmenting of data by rate-limiter before it is stored, rate-limiter is called enough times to accumulate enough credits for a certain write. This design only support Manifest and WAL which use log_writer in the current stage. Pull Request resolved: https://github.com/facebook/rocksdb/pull/8412 Test Plan: make check, add new testing cases. Reviewed By: anand1976 Differential Revision: D29151545 Pulled By: zhichao-cao fbshipit-source-id: 75e2278c5126cfd58393c67b1efd18dcc7a30772
3 years ago
tmp_set.Contains(FileType::kTableFile), false));
builder = NewTableBuilder(tboptions, file_writer.get());
}
auto ucmp = tboptions.internal_comparator.user_comparator();
MergeHelper merge(
env, ucmp, ioptions.merge_operator.get(), compaction_filter.get(),
ioptions.logger, true /* internal key corruption is not ok */,
snapshots.empty() ? 0 : snapshots.back(), snapshot_checker);
std::unique_ptr<BlobFileBuilder> blob_file_builder(
Make it possible to enable blob files starting from a certain LSM tree level (#10077) Summary: Currently, if blob files are enabled (i.e. `enable_blob_files` is true), large values are extracted both during flush/recovery (when SST files are written into level 0 of the LSM tree) and during compaction into any LSM tree level. For certain use cases that have a mix of short-lived and long-lived values, it might make sense to support extracting large values only during compactions whose output level is greater than or equal to a specified LSM tree level (e.g. compactions into L1/L2/... or above). This could reduce the space amplification caused by large values that are turned into garbage shortly after being written at the price of some write amplification incurred by long-lived values whose extraction to blob files is delayed. In order to achieve this, we would like to do the following: - Add a new configuration option `blob_file_starting_level` (default: 0) to `AdvancedColumnFamilyOptions` (and `MutableCFOptions` and extend the related logic) - Instantiate `BlobFileBuilder` in `BuildTable` (used during flush and recovery, where the LSM tree level is L0) and `CompactionJob` iff `enable_blob_files` is set and the LSM tree level is `>= blob_file_starting_level` - Add unit tests for the new functionality, and add the new option to our stress tests (`db_stress` and `db_crashtest.py` ) - Add the new option to our benchmarking tool `db_bench` and the BlobDB benchmark script `run_blob_bench.sh` - Add the new option to the `ldb` tool (see https://github.com/facebook/rocksdb/wiki/Administration-and-Data-Access-Tool) - Ideally extend the C and Java bindings with the new option - Update the BlobDB wiki to document the new option. Pull Request resolved: https://github.com/facebook/rocksdb/pull/10077 Reviewed By: ltamasi Differential Revision: D36884156 Pulled By: gangliao fbshipit-source-id: 942bab025f04633edca8564ed64791cb5e31627d
2 years ago
(mutable_cf_options.enable_blob_files &&
tboptions.level_at_creation >=
mutable_cf_options.blob_file_starting_level &&
blob_file_additions)
? new BlobFileBuilder(
versions, fs, &ioptions, &mutable_cf_options, &file_options,
tboptions.db_id, tboptions.db_session_id, job_id,
tboptions.column_family_id, tboptions.column_family_name,
io_priority, write_hint, io_tracer, blob_callback,
blob_creation_reason, &blob_file_paths, blob_file_additions)
: nullptr);
const std::atomic<bool> kManualCompactionCanceledFalse{false};
Compaction Support for Range Deletion Summary: This diff introduces RangeDelAggregator, which takes ownership of iterators provided to it via AddTombstones(). The tombstones are organized in a two-level map (snapshot stripe -> begin key -> tombstone). Tombstone creation avoids data copy by holding Slices returned by the iterator, which remain valid thanks to pinning. For compaction, we create a hierarchical range tombstone iterator with structure matching the iterator over compaction input data. An aggregator based on that iterator is used by CompactionIterator to determine which keys are covered by range tombstones. In case of merge operand, the same aggregator is used by MergeHelper. Upon finishing each file in the compaction, relevant range tombstones are added to the output file's range tombstone metablock and file boundaries are updated accordingly. To check whether a key is covered by range tombstone, RangeDelAggregator::ShouldDelete() considers tombstones in the key's snapshot stripe. When this function is used outside of compaction, it also checks newer stripes, which can contain covering tombstones. Currently the intra-stripe check involves a linear scan; however, in the future we plan to collapse ranges within a stripe such that binary search can be used. RangeDelAggregator::AddToBuilder() adds all range tombstones in the table's key-range to a new table's range tombstone meta-block. Since range tombstones may fall in the gap between files, we may need to extend some files' key-ranges. The strategy is (1) first file extends as far left as possible and other files do not extend left, (2) all files extend right until either the start of the next file or the end of the last range tombstone in the gap, whichever comes first. One other notable change is adding release/move semantics to ScopedArenaIterator such that it can be used to transfer ownership of an arena-allocated iterator, similar to how unique_ptr is used for malloc'd data. Depends on D61473 Test Plan: compaction_iterator_test, mock_table, end-to-end tests in D63927 Reviewers: sdong, IslamAbdelRahman, wanning, yhchiang, lightmark Reviewed By: lightmark Subscribers: andrewkr, dhruba, leveldb Differential Revision: https://reviews.facebook.net/D62205
8 years ago
CompactionIterator c_iter(
iter, ucmp, &merge, kMaxSequenceNumber, &snapshots,
earliest_write_conflict_snapshot, job_snapshot, snapshot_checker, env,
CompactionIterator sees consistent view of which keys are committed (#9830) Summary: **This PR does not affect the functionality of `DB` and write-committed transactions.** `CompactionIterator` uses `KeyCommitted(seq)` to determine if a key in the database is committed. As the name 'write-committed' implies, if write-committed policy is used, a key exists in the database only if it is committed. In fact, the implementation of `KeyCommitted()` is as follows: ``` inline bool KeyCommitted(SequenceNumber seq) { // For non-txn-db and write-committed, snapshot_checker_ is always nullptr. return snapshot_checker_ == nullptr || snapshot_checker_->CheckInSnapshot(seq, kMaxSequence) == SnapshotCheckerResult::kInSnapshot; } ``` With that being said, we focus on write-prepared/write-unprepared transactions. A few notes: - A key can exist in the db even if it's uncommitted. Therefore, we rely on `snapshot_checker_` to determine data visibility. We also require that all writes go through transaction API instead of the raw `WriteBatch` + `Write`, thus at most one uncommitted version of one user key can exist in the database. - `CompactionIterator` outputs a key as long as the key is uncommitted. Due to the above reasons, it is possible that `CompactionIterator` decides to output an uncommitted key without doing further checks on the key (`NextFromInput()`). By the time the key is being prepared for output, the key becomes committed because the `snapshot_checker_(seq, kMaxSequence)` becomes true in the implementation of `KeyCommitted()`. Then `CompactionIterator` will try to zero its sequence number and hit assertion error if the key is a tombstone. To fix this issue, we should make the `CompactionIterator` see a consistent view of the input keys. Note that for write-prepared/write-unprepared, the background flush/compaction jobs already take a "job snapshot" before starting processing keys. The job snapshot is released only after the entire flush/compaction finishes. We can use this snapshot to determine whether a key is committed or not with minor change to `KeyCommitted()`. ``` inline bool KeyCommitted(SequenceNumber sequence) { // For non-txn-db and write-committed, snapshot_checker_ is always nullptr. return snapshot_checker_ == nullptr || snapshot_checker_->CheckInSnapshot(sequence, job_snapshot_) == SnapshotCheckerResult::kInSnapshot; } ``` As a result, whether a key is committed or not will remain a constant throughout compaction, causing no trouble for `CompactionIterator`s assertions. Pull Request resolved: https://github.com/facebook/rocksdb/pull/9830 Test Plan: make check Reviewed By: ltamasi Differential Revision: D35561162 Pulled By: riversand963 fbshipit-source-id: 0e00d200c195240341cfe6d34cbc86798b315b9f
3 years ago
ShouldReportDetailedTime(env, ioptions.stats),
true /* internal key corruption is not ok */, range_del_agg.get(),
blob_file_builder.get(), ioptions.allow_data_in_errors,
ioptions.enforce_single_del_contracts,
/*manual_compaction_canceled=*/kManualCompactionCanceledFalse,
Compare the number of input keys and processed keys for compactions (#11571) Summary: ... to improve data integrity validation during compaction. A new option `compaction_verify_record_count` is introduced for this verification and is enabled by default. One exception when the verification is not done is when a compaction filter returns kRemoveAndSkipUntil which can cause CompactionIterator to seek until some key and hence not able to keep track of the number of keys processed. For expected number of input keys, we sum over the number of total keys - number of range tombstones across compaction input files (`CompactionJob::UpdateCompactionStats()`). Table properties are consulted if `FileMetaData` is not initialized for some input file. Since table properties for all input files were also constructed during `DBImpl::NotifyOnCompactionBegin()`, `Compaction::GetTableProperties()` is introduced to reduce duplicated code. For actual number of keys processed, each subcompaction will record its number of keys processed to `sub_compact->compaction_job_stats.num_input_records` and aggregated when all subcompactions finish (`CompactionJob::AggregateCompactionStats()`). In the case when some subcompaction encountered kRemoveAndSkipUntil from compaction filter and does not have accurate count, it propagates this information through `sub_compact->compaction_job_stats.has_num_input_records`. Pull Request resolved: https://github.com/facebook/rocksdb/pull/11571 Test Plan: * Add a new unit test `DBCompactionTest.VerifyRecordCount` for the corruption case. * All other unit tests for non-corrupted case. * Ran crash test for a few hours: `python3 ./tools/db_crashtest.py whitebox --simple` Reviewed By: ajkr Differential Revision: D47131965 Pulled By: cbi42 fbshipit-source-id: cc8e94565dd526c4347e9d3843ecf32f6727af92
1 year ago
true /* must_count_input_entries */,
/*compaction=*/nullptr, compaction_filter.get(),
/*shutting_down=*/nullptr, db_options.info_log, full_history_ts_low);
Logically strip timestamp during flush (#11557) Summary: Logically strip the user-defined timestamp when L0 files are created during flush when `AdvancedColumnFamilyOptions.persist_user_defined_timestamps` is false. Logically stripping timestamp here means replacing the original user-defined timestamp with a mininum timestamp, which for now is hard coded to be all zeros bytes. While working on this, I caught a missing piece on the `BlockBuilder` level for this feature. The current quick path `std::min(buffer_size, last_key_size)` needs a bit tweaking to work for this feature. When user-defined timestamp is stripped during block building, on writing first entry or right after resetting, `buffer` is empty and `buffer_size` is zero as usual. However, in follow-up writes, depending on the size of the stripped user-defined timestamp, and the size of the value, what's in `buffer` can sometimes be smaller than `last_key_size`, leading `std::min(buffer_size, last_key_size)` to truncate the `last_key`. Previous test doesn't caught the bug because in those tests, the size of the stripped user-defined timestamps bytes is smaller than the length of the value. In order to avoid the conditional operation, this PR changed the original trivial `std::min` operation into an arithmetic operation. Since this is a change in a hot and performance critical path, I did the following benchmark to check no observable regression is introduced. ```TEST_TMPDIR=/dev/shm/rocksdb1 ./db_bench -benchmarks=fillseq -memtablerep=vector -allow_concurrent_memtable_write=false -num=50000000``` Compiled with DEBUG_LEVEL=0 Test vs. control runs simulaneous for better accuracy, units = ops/sec PR vs base: Round 1: 350652 vs 349055 Round 2: 365733 vs 364308 Round 3: 355681 vs 354475 Pull Request resolved: https://github.com/facebook/rocksdb/pull/11557 Test Plan: New timestamp specific test added or existing tests augmented, both are parameterized with `UserDefinedTimestampTestMode`: `UserDefinedTimestampTestMode::kNormal` -> UDT feature enabled, write / read with min timestamp `UserDefinedTimestampTestMode::kStripUserDefinedTimestamps` -> UDT feature enabled, write / read with min timestamp, set Options.persist_user_defined_timestamps to false. ``` make all check ./db_wal_test --gtest_filter="*WithTimestamp*" ./flush_job_test --gtest_filter="*WithTimestamp*" ./repair_test --gtest_filter="*WithTimestamp*" ./block_based_table_reader_test ``` Reviewed By: pdillinger Differential Revision: D47027664 Pulled By: jowlyzhang fbshipit-source-id: e729193b6334dfc63aaa736d684d907a022571f5
1 year ago
const size_t ts_sz = ucmp->timestamp_size();
const bool strip_timestamp =
ts_sz > 0 && !ioptions.persist_user_defined_timestamps;
std::string key_after_flush_buf;
c_iter.SeekToFirst();
for (; c_iter.Valid(); c_iter.Next()) {
const Slice& key = c_iter.key();
const Slice& value = c_iter.value();
const ParsedInternalKey& ikey = c_iter.ikey();
Logically strip timestamp during flush (#11557) Summary: Logically strip the user-defined timestamp when L0 files are created during flush when `AdvancedColumnFamilyOptions.persist_user_defined_timestamps` is false. Logically stripping timestamp here means replacing the original user-defined timestamp with a mininum timestamp, which for now is hard coded to be all zeros bytes. While working on this, I caught a missing piece on the `BlockBuilder` level for this feature. The current quick path `std::min(buffer_size, last_key_size)` needs a bit tweaking to work for this feature. When user-defined timestamp is stripped during block building, on writing first entry or right after resetting, `buffer` is empty and `buffer_size` is zero as usual. However, in follow-up writes, depending on the size of the stripped user-defined timestamp, and the size of the value, what's in `buffer` can sometimes be smaller than `last_key_size`, leading `std::min(buffer_size, last_key_size)` to truncate the `last_key`. Previous test doesn't caught the bug because in those tests, the size of the stripped user-defined timestamps bytes is smaller than the length of the value. In order to avoid the conditional operation, this PR changed the original trivial `std::min` operation into an arithmetic operation. Since this is a change in a hot and performance critical path, I did the following benchmark to check no observable regression is introduced. ```TEST_TMPDIR=/dev/shm/rocksdb1 ./db_bench -benchmarks=fillseq -memtablerep=vector -allow_concurrent_memtable_write=false -num=50000000``` Compiled with DEBUG_LEVEL=0 Test vs. control runs simulaneous for better accuracy, units = ops/sec PR vs base: Round 1: 350652 vs 349055 Round 2: 365733 vs 364308 Round 3: 355681 vs 354475 Pull Request resolved: https://github.com/facebook/rocksdb/pull/11557 Test Plan: New timestamp specific test added or existing tests augmented, both are parameterized with `UserDefinedTimestampTestMode`: `UserDefinedTimestampTestMode::kNormal` -> UDT feature enabled, write / read with min timestamp `UserDefinedTimestampTestMode::kStripUserDefinedTimestamps` -> UDT feature enabled, write / read with min timestamp, set Options.persist_user_defined_timestamps to false. ``` make all check ./db_wal_test --gtest_filter="*WithTimestamp*" ./flush_job_test --gtest_filter="*WithTimestamp*" ./repair_test --gtest_filter="*WithTimestamp*" ./block_based_table_reader_test ``` Reviewed By: pdillinger Differential Revision: D47027664 Pulled By: jowlyzhang fbshipit-source-id: e729193b6334dfc63aaa736d684d907a022571f5
1 year ago
Slice key_after_flush = key;
// If user defined timestamps will be stripped from user key after flush,
// the in memory version of the key act logically the same as one with a
// minimum timestamp. We update the timestamp here so file boundary and
// output validator, block builder all see the effect of the stripping.
if (strip_timestamp) {
key_after_flush_buf.clear();
ReplaceInternalKeyWithMinTimestamp(&key_after_flush_buf, key, ts_sz);
key_after_flush = key_after_flush_buf;
}
// Generate a rolling 64-bit hash of the key and values
// Note :
// Here "key" integrates 'sequence_number'+'kType'+'user key'.
s = output_validator.Add(key_after_flush, value);
if (!s.ok()) {
break;
}
Logically strip timestamp during flush (#11557) Summary: Logically strip the user-defined timestamp when L0 files are created during flush when `AdvancedColumnFamilyOptions.persist_user_defined_timestamps` is false. Logically stripping timestamp here means replacing the original user-defined timestamp with a mininum timestamp, which for now is hard coded to be all zeros bytes. While working on this, I caught a missing piece on the `BlockBuilder` level for this feature. The current quick path `std::min(buffer_size, last_key_size)` needs a bit tweaking to work for this feature. When user-defined timestamp is stripped during block building, on writing first entry or right after resetting, `buffer` is empty and `buffer_size` is zero as usual. However, in follow-up writes, depending on the size of the stripped user-defined timestamp, and the size of the value, what's in `buffer` can sometimes be smaller than `last_key_size`, leading `std::min(buffer_size, last_key_size)` to truncate the `last_key`. Previous test doesn't caught the bug because in those tests, the size of the stripped user-defined timestamps bytes is smaller than the length of the value. In order to avoid the conditional operation, this PR changed the original trivial `std::min` operation into an arithmetic operation. Since this is a change in a hot and performance critical path, I did the following benchmark to check no observable regression is introduced. ```TEST_TMPDIR=/dev/shm/rocksdb1 ./db_bench -benchmarks=fillseq -memtablerep=vector -allow_concurrent_memtable_write=false -num=50000000``` Compiled with DEBUG_LEVEL=0 Test vs. control runs simulaneous for better accuracy, units = ops/sec PR vs base: Round 1: 350652 vs 349055 Round 2: 365733 vs 364308 Round 3: 355681 vs 354475 Pull Request resolved: https://github.com/facebook/rocksdb/pull/11557 Test Plan: New timestamp specific test added or existing tests augmented, both are parameterized with `UserDefinedTimestampTestMode`: `UserDefinedTimestampTestMode::kNormal` -> UDT feature enabled, write / read with min timestamp `UserDefinedTimestampTestMode::kStripUserDefinedTimestamps` -> UDT feature enabled, write / read with min timestamp, set Options.persist_user_defined_timestamps to false. ``` make all check ./db_wal_test --gtest_filter="*WithTimestamp*" ./flush_job_test --gtest_filter="*WithTimestamp*" ./repair_test --gtest_filter="*WithTimestamp*" ./block_based_table_reader_test ``` Reviewed By: pdillinger Differential Revision: D47027664 Pulled By: jowlyzhang fbshipit-source-id: e729193b6334dfc63aaa736d684d907a022571f5
1 year ago
builder->Add(key_after_flush, value);
Logically strip timestamp during flush (#11557) Summary: Logically strip the user-defined timestamp when L0 files are created during flush when `AdvancedColumnFamilyOptions.persist_user_defined_timestamps` is false. Logically stripping timestamp here means replacing the original user-defined timestamp with a mininum timestamp, which for now is hard coded to be all zeros bytes. While working on this, I caught a missing piece on the `BlockBuilder` level for this feature. The current quick path `std::min(buffer_size, last_key_size)` needs a bit tweaking to work for this feature. When user-defined timestamp is stripped during block building, on writing first entry or right after resetting, `buffer` is empty and `buffer_size` is zero as usual. However, in follow-up writes, depending on the size of the stripped user-defined timestamp, and the size of the value, what's in `buffer` can sometimes be smaller than `last_key_size`, leading `std::min(buffer_size, last_key_size)` to truncate the `last_key`. Previous test doesn't caught the bug because in those tests, the size of the stripped user-defined timestamps bytes is smaller than the length of the value. In order to avoid the conditional operation, this PR changed the original trivial `std::min` operation into an arithmetic operation. Since this is a change in a hot and performance critical path, I did the following benchmark to check no observable regression is introduced. ```TEST_TMPDIR=/dev/shm/rocksdb1 ./db_bench -benchmarks=fillseq -memtablerep=vector -allow_concurrent_memtable_write=false -num=50000000``` Compiled with DEBUG_LEVEL=0 Test vs. control runs simulaneous for better accuracy, units = ops/sec PR vs base: Round 1: 350652 vs 349055 Round 2: 365733 vs 364308 Round 3: 355681 vs 354475 Pull Request resolved: https://github.com/facebook/rocksdb/pull/11557 Test Plan: New timestamp specific test added or existing tests augmented, both are parameterized with `UserDefinedTimestampTestMode`: `UserDefinedTimestampTestMode::kNormal` -> UDT feature enabled, write / read with min timestamp `UserDefinedTimestampTestMode::kStripUserDefinedTimestamps` -> UDT feature enabled, write / read with min timestamp, set Options.persist_user_defined_timestamps to false. ``` make all check ./db_wal_test --gtest_filter="*WithTimestamp*" ./flush_job_test --gtest_filter="*WithTimestamp*" ./repair_test --gtest_filter="*WithTimestamp*" ./block_based_table_reader_test ``` Reviewed By: pdillinger Differential Revision: D47027664 Pulled By: jowlyzhang fbshipit-source-id: e729193b6334dfc63aaa736d684d907a022571f5
1 year ago
s = meta->UpdateBoundaries(key_after_flush, value, ikey.sequence,
ikey.type);
if (!s.ok()) {
break;
}
// TODO(noetzli): Update stats after flush, too.
if (io_priority == Env::IO_HIGH &&
IOSTATS(bytes_written) >= kReportFlushIOStatsEvery) {
ThreadStatusUtil::SetThreadOperationProperty(
ThreadStatus::FLUSH_BYTES_WRITTEN, IOSTATS(bytes_written));
}
}
if (!s.ok()) {
c_iter.status().PermitUncheckedError();
} else if (!c_iter.status().ok()) {
s = c_iter.status();
}
if (s.ok()) {
auto range_del_it = range_del_agg->NewIterator();
Slice last_tombstone_start_user_key{};
for (range_del_it->SeekToFirst(); range_del_it->Valid();
range_del_it->Next()) {
auto tombstone = range_del_it->Tombstone();
auto kv = tombstone.Serialize();
Logically strip timestamp during flush (#11557) Summary: Logically strip the user-defined timestamp when L0 files are created during flush when `AdvancedColumnFamilyOptions.persist_user_defined_timestamps` is false. Logically stripping timestamp here means replacing the original user-defined timestamp with a mininum timestamp, which for now is hard coded to be all zeros bytes. While working on this, I caught a missing piece on the `BlockBuilder` level for this feature. The current quick path `std::min(buffer_size, last_key_size)` needs a bit tweaking to work for this feature. When user-defined timestamp is stripped during block building, on writing first entry or right after resetting, `buffer` is empty and `buffer_size` is zero as usual. However, in follow-up writes, depending on the size of the stripped user-defined timestamp, and the size of the value, what's in `buffer` can sometimes be smaller than `last_key_size`, leading `std::min(buffer_size, last_key_size)` to truncate the `last_key`. Previous test doesn't caught the bug because in those tests, the size of the stripped user-defined timestamps bytes is smaller than the length of the value. In order to avoid the conditional operation, this PR changed the original trivial `std::min` operation into an arithmetic operation. Since this is a change in a hot and performance critical path, I did the following benchmark to check no observable regression is introduced. ```TEST_TMPDIR=/dev/shm/rocksdb1 ./db_bench -benchmarks=fillseq -memtablerep=vector -allow_concurrent_memtable_write=false -num=50000000``` Compiled with DEBUG_LEVEL=0 Test vs. control runs simulaneous for better accuracy, units = ops/sec PR vs base: Round 1: 350652 vs 349055 Round 2: 365733 vs 364308 Round 3: 355681 vs 354475 Pull Request resolved: https://github.com/facebook/rocksdb/pull/11557 Test Plan: New timestamp specific test added or existing tests augmented, both are parameterized with `UserDefinedTimestampTestMode`: `UserDefinedTimestampTestMode::kNormal` -> UDT feature enabled, write / read with min timestamp `UserDefinedTimestampTestMode::kStripUserDefinedTimestamps` -> UDT feature enabled, write / read with min timestamp, set Options.persist_user_defined_timestamps to false. ``` make all check ./db_wal_test --gtest_filter="*WithTimestamp*" ./flush_job_test --gtest_filter="*WithTimestamp*" ./repair_test --gtest_filter="*WithTimestamp*" ./block_based_table_reader_test ``` Reviewed By: pdillinger Differential Revision: D47027664 Pulled By: jowlyzhang fbshipit-source-id: e729193b6334dfc63aaa736d684d907a022571f5
1 year ago
// TODO(yuzhangyu): handle range deletion for UDT in memtables only.
builder->Add(kv.first.Encode(), kv.second);
Include estimated bytes deleted by range tombstones in compensated file size (#10734) Summary: compensate file sizes in compaction picking so files with range tombstones are preferred, such that they get compacted down earlier as they tend to delete a lot of data. This PR adds a `compensated_range_deletion_size` field in FileMeta that is computed during Flush/Compaction and persisted in MANIFEST. This value is added to `compensated_file_size` which will be used for compaction picking. Currently, for a file in level L, `compensated_range_deletion_size` is set to the estimated bytes deleted by range tombstone of this file in all levels > L. This helps to reduce space amp when data in older levels are covered by range tombstones in level L. Pull Request resolved: https://github.com/facebook/rocksdb/pull/10734 Test Plan: - Added unit tests. - benchmark to check if the above definition `compensated_range_deletion_size` is reducing space amp as intended, without affecting write amp too much. The experiment set up favorable for this optimization: large range tombstone issued infrequently. Command used: ``` ./db_bench -benchmarks=fillrandom,waitforcompaction,stats,levelstats -use_existing_db=false -avoid_flush_during_recovery=true -write_buffer_size=33554432 -level_compaction_dynamic_level_bytes=true -max_background_jobs=8 -max_bytes_for_level_base=134217728 -target_file_size_base=33554432 -writes_per_range_tombstone=500000 -range_tombstone_width=5000000 -num=50000000 -benchmark_write_rate_limit=8388608 -threads=16 -duration=1800 --max_num_range_tombstones=1000000000 ``` In this experiment, each thread wrote 16 range tombstones over the duration of 30 minutes, each range tombstone has width 5M that is the 10% of the key space width. Results shows this PR generates a smaller DB size. Compaction stats from this PR: ``` Level Files Size Score Read(GB) Rn(GB) Rnp1(GB) Write(GB) Wnew(GB) Moved(GB) W-Amp Rd(MB/s) Wr(MB/s) Comp(sec) CompMergeCPU(sec) Comp(cnt) Avg(sec) KeyIn KeyDrop Rblob(GB) Wblob(GB) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ L0 2/0 31.54 MB 0.5 0.0 0.0 0.0 8.4 8.4 0.0 1.0 0.0 63.4 135.56 110.94 544 0.249 0 0 0.0 0.0 L4 3/0 96.55 MB 0.8 18.5 6.7 11.8 18.4 6.6 0.0 2.7 65.3 64.9 290.08 284.03 108 2.686 284M 1957K 0.0 0.0 L5 15/0 404.41 MB 1.0 19.1 7.7 11.4 18.8 7.4 0.3 2.5 66.6 65.7 292.93 285.34 220 1.332 293M 3808K 0.0 0.0 L6 143/0 4.12 GB 0.0 45.0 7.5 37.5 41.6 4.1 0.0 5.5 71.2 65.9 647.00 632.66 251 2.578 739M 47M 0.0 0.0 Sum 163/0 4.64 GB 0.0 82.6 21.9 60.7 87.2 26.5 0.3 10.4 61.9 65.4 1365.58 1312.97 1123 1.216 1318M 52M 0.0 0.0 ``` Compaction stats from main: ``` Level Files Size Score Read(GB) Rn(GB) Rnp1(GB) Write(GB) Wnew(GB) Moved(GB) W-Amp Rd(MB/s) Wr(MB/s) Comp(sec) CompMergeCPU(sec) Comp(cnt) Avg(sec) KeyIn KeyDrop Rblob(GB) Wblob(GB) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ L0 0/0 0.00 KB 0.0 0.0 0.0 0.0 8.4 8.4 0.0 1.0 0.0 60.5 142.12 115.89 569 0.250 0 0 0.0 0.0 L4 3/0 85.68 MB 1.0 17.7 6.8 10.9 17.6 6.7 0.0 2.6 62.7 62.3 289.05 281.79 112 2.581 272M 2309K 0.0 0.0 L5 11/0 293.73 MB 1.0 18.8 7.5 11.2 18.5 7.2 0.5 2.5 64.9 63.9 296.07 288.50 220 1.346 288M 4365K 0.0 0.0 L6 130/0 3.94 GB 0.0 51.5 7.6 43.9 47.9 3.9 0.0 6.3 67.2 62.4 784.95 765.92 258 3.042 848M 51M 0.0 0.0 Sum 144/0 4.31 GB 0.0 88.0 21.9 66.0 92.3 26.3 0.5 11.0 59.6 62.5 1512.19 1452.09 1159 1.305 1409M 58M 0.0 0.0``` Reviewed By: ajkr Differential Revision: D39834713 Pulled By: cbi42 fbshipit-source-id: fe9341040b8704a8fbb10cad5cf5c43e962c7e6b
2 years ago
InternalKey tombstone_end = tombstone.SerializeEndKey();
meta->UpdateBoundariesForRange(kv.first, tombstone_end, tombstone.seq_,
tboptions.internal_comparator);
Include estimated bytes deleted by range tombstones in compensated file size (#10734) Summary: compensate file sizes in compaction picking so files with range tombstones are preferred, such that they get compacted down earlier as they tend to delete a lot of data. This PR adds a `compensated_range_deletion_size` field in FileMeta that is computed during Flush/Compaction and persisted in MANIFEST. This value is added to `compensated_file_size` which will be used for compaction picking. Currently, for a file in level L, `compensated_range_deletion_size` is set to the estimated bytes deleted by range tombstone of this file in all levels > L. This helps to reduce space amp when data in older levels are covered by range tombstones in level L. Pull Request resolved: https://github.com/facebook/rocksdb/pull/10734 Test Plan: - Added unit tests. - benchmark to check if the above definition `compensated_range_deletion_size` is reducing space amp as intended, without affecting write amp too much. The experiment set up favorable for this optimization: large range tombstone issued infrequently. Command used: ``` ./db_bench -benchmarks=fillrandom,waitforcompaction,stats,levelstats -use_existing_db=false -avoid_flush_during_recovery=true -write_buffer_size=33554432 -level_compaction_dynamic_level_bytes=true -max_background_jobs=8 -max_bytes_for_level_base=134217728 -target_file_size_base=33554432 -writes_per_range_tombstone=500000 -range_tombstone_width=5000000 -num=50000000 -benchmark_write_rate_limit=8388608 -threads=16 -duration=1800 --max_num_range_tombstones=1000000000 ``` In this experiment, each thread wrote 16 range tombstones over the duration of 30 minutes, each range tombstone has width 5M that is the 10% of the key space width. Results shows this PR generates a smaller DB size. Compaction stats from this PR: ``` Level Files Size Score Read(GB) Rn(GB) Rnp1(GB) Write(GB) Wnew(GB) Moved(GB) W-Amp Rd(MB/s) Wr(MB/s) Comp(sec) CompMergeCPU(sec) Comp(cnt) Avg(sec) KeyIn KeyDrop Rblob(GB) Wblob(GB) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ L0 2/0 31.54 MB 0.5 0.0 0.0 0.0 8.4 8.4 0.0 1.0 0.0 63.4 135.56 110.94 544 0.249 0 0 0.0 0.0 L4 3/0 96.55 MB 0.8 18.5 6.7 11.8 18.4 6.6 0.0 2.7 65.3 64.9 290.08 284.03 108 2.686 284M 1957K 0.0 0.0 L5 15/0 404.41 MB 1.0 19.1 7.7 11.4 18.8 7.4 0.3 2.5 66.6 65.7 292.93 285.34 220 1.332 293M 3808K 0.0 0.0 L6 143/0 4.12 GB 0.0 45.0 7.5 37.5 41.6 4.1 0.0 5.5 71.2 65.9 647.00 632.66 251 2.578 739M 47M 0.0 0.0 Sum 163/0 4.64 GB 0.0 82.6 21.9 60.7 87.2 26.5 0.3 10.4 61.9 65.4 1365.58 1312.97 1123 1.216 1318M 52M 0.0 0.0 ``` Compaction stats from main: ``` Level Files Size Score Read(GB) Rn(GB) Rnp1(GB) Write(GB) Wnew(GB) Moved(GB) W-Amp Rd(MB/s) Wr(MB/s) Comp(sec) CompMergeCPU(sec) Comp(cnt) Avg(sec) KeyIn KeyDrop Rblob(GB) Wblob(GB) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ L0 0/0 0.00 KB 0.0 0.0 0.0 0.0 8.4 8.4 0.0 1.0 0.0 60.5 142.12 115.89 569 0.250 0 0 0.0 0.0 L4 3/0 85.68 MB 1.0 17.7 6.8 10.9 17.6 6.7 0.0 2.6 62.7 62.3 289.05 281.79 112 2.581 272M 2309K 0.0 0.0 L5 11/0 293.73 MB 1.0 18.8 7.5 11.2 18.5 7.2 0.5 2.5 64.9 63.9 296.07 288.50 220 1.346 288M 4365K 0.0 0.0 L6 130/0 3.94 GB 0.0 51.5 7.6 43.9 47.9 3.9 0.0 6.3 67.2 62.4 784.95 765.92 258 3.042 848M 51M 0.0 0.0 Sum 144/0 4.31 GB 0.0 88.0 21.9 66.0 92.3 26.3 0.5 11.0 59.6 62.5 1512.19 1452.09 1159 1.305 1409M 58M 0.0 0.0``` Reviewed By: ajkr Differential Revision: D39834713 Pulled By: cbi42 fbshipit-source-id: fe9341040b8704a8fbb10cad5cf5c43e962c7e6b
2 years ago
if (version) {
if (last_tombstone_start_user_key.empty() ||
ucmp->CompareWithoutTimestamp(last_tombstone_start_user_key,
range_del_it->start_key()) < 0) {
SizeApproximationOptions approx_opts;
approx_opts.files_size_error_margin = 0.1;
meta->compensated_range_deletion_size += versions->ApproximateSize(
Group rocksdb.sst.read.micros stat by IOActivity flush and compaction (#11288) Summary: **Context:** The existing stat rocksdb.sst.read.micros does not reflect each of compaction and flush cases but aggregate them, which is not so helpful for us to understand IO read behavior of each of them. **Summary** - Update `StopWatch` and `RandomAccessFileReader` to record `rocksdb.sst.read.micros` and `rocksdb.file.{flush/compaction}.read.micros` - Fixed the default histogram in `RandomAccessFileReader` - New field `ReadOptions/IOOptions::io_activity`; Pass `ReadOptions` through paths under db open, flush and compaction to where we can prepare `IOOptions` and pass it to `RandomAccessFileReader` - Use `thread_status_util` for assertion in `DbStressFSWrapper` for continuous testing on we are passing correct `io_activity` under db open, flush and compaction Pull Request resolved: https://github.com/facebook/rocksdb/pull/11288 Test Plan: - **Stress test** - **Db bench 1: rocksdb.sst.read.micros COUNT ≈ sum of rocksdb.file.read.flush.micros's and rocksdb.file.read.compaction.micros's.** (without blob) - May not be exactly the same due to `HistogramStat::Add` only guarantees atomic not accuracy across threads. ``` ./db_bench -db=/dev/shm/testdb/ -statistics=true -benchmarks="fillseq" -key_size=32 -value_size=512 -num=50000 -write_buffer_size=655 -target_file_size_base=655 -disable_auto_compactions=false -compression_type=none -bloom_bits=3 (-use_plain_table=1 -prefix_size=10) ``` ``` // BlockBasedTable rocksdb.sst.read.micros P50 : 2.009374 P95 : 4.968548 P99 : 8.110362 P100 : 43.000000 COUNT : 40456 SUM : 114805 rocksdb.file.read.flush.micros P50 : 1.871841 P95 : 3.872407 P99 : 5.540541 P100 : 43.000000 COUNT : 2250 SUM : 6116 rocksdb.file.read.compaction.micros P50 : 2.023109 P95 : 5.029149 P99 : 8.196910 P100 : 26.000000 COUNT : 38206 SUM : 108689 // PlainTable Does not apply ``` - **Db bench 2: performance** **Read** SETUP: db with 900 files ``` ./db_bench -db=/dev/shm/testdb/ -benchmarks="fillseq" -key_size=32 -value_size=512 -num=50000 -write_buffer_size=655 -disable_auto_compactions=true -target_file_size_base=655 -compression_type=none ```run till convergence ``` ./db_bench -seed=1678564177044286 -use_existing_db=true -db=/dev/shm/testdb -benchmarks=readrandom[-X60] -statistics=true -num=1000000 -disable_auto_compactions=true -compression_type=none -bloom_bits=3 ``` Pre-change `readrandom [AVG 60 runs] : 21568 (± 248) ops/sec` Post-change (no regression, -0.3%) `readrandom [AVG 60 runs] : 21486 (± 236) ops/sec` **Compaction/Flush**run till convergence ``` ./db_bench -db=/dev/shm/testdb2/ -seed=1678564177044286 -benchmarks="fillseq[-X60]" -key_size=32 -value_size=512 -num=50000 -write_buffer_size=655 -disable_auto_compactions=false -target_file_size_base=655 -compression_type=none rocksdb.sst.read.micros COUNT : 33820 rocksdb.sst.read.flush.micros COUNT : 1800 rocksdb.sst.read.compaction.micros COUNT : 32020 ``` Pre-change `fillseq [AVG 46 runs] : 1391 (± 214) ops/sec; 0.7 (± 0.1) MB/sec` Post-change (no regression, ~-0.4%) `fillseq [AVG 46 runs] : 1385 (± 216) ops/sec; 0.7 (± 0.1) MB/sec` Reviewed By: ajkr Differential Revision: D44007011 Pulled By: hx235 fbshipit-source-id: a54c89e4846dfc9a135389edf3f3eedfea257132
2 years ago
approx_opts, read_options, version, kv.first.Encode(),
tombstone_end.Encode(), 0 /* start_level */, -1 /* end_level */,
TableReaderCaller::kFlush);
}
last_tombstone_start_user_key = range_del_it->start_key();
Include estimated bytes deleted by range tombstones in compensated file size (#10734) Summary: compensate file sizes in compaction picking so files with range tombstones are preferred, such that they get compacted down earlier as they tend to delete a lot of data. This PR adds a `compensated_range_deletion_size` field in FileMeta that is computed during Flush/Compaction and persisted in MANIFEST. This value is added to `compensated_file_size` which will be used for compaction picking. Currently, for a file in level L, `compensated_range_deletion_size` is set to the estimated bytes deleted by range tombstone of this file in all levels > L. This helps to reduce space amp when data in older levels are covered by range tombstones in level L. Pull Request resolved: https://github.com/facebook/rocksdb/pull/10734 Test Plan: - Added unit tests. - benchmark to check if the above definition `compensated_range_deletion_size` is reducing space amp as intended, without affecting write amp too much. The experiment set up favorable for this optimization: large range tombstone issued infrequently. Command used: ``` ./db_bench -benchmarks=fillrandom,waitforcompaction,stats,levelstats -use_existing_db=false -avoid_flush_during_recovery=true -write_buffer_size=33554432 -level_compaction_dynamic_level_bytes=true -max_background_jobs=8 -max_bytes_for_level_base=134217728 -target_file_size_base=33554432 -writes_per_range_tombstone=500000 -range_tombstone_width=5000000 -num=50000000 -benchmark_write_rate_limit=8388608 -threads=16 -duration=1800 --max_num_range_tombstones=1000000000 ``` In this experiment, each thread wrote 16 range tombstones over the duration of 30 minutes, each range tombstone has width 5M that is the 10% of the key space width. Results shows this PR generates a smaller DB size. Compaction stats from this PR: ``` Level Files Size Score Read(GB) Rn(GB) Rnp1(GB) Write(GB) Wnew(GB) Moved(GB) W-Amp Rd(MB/s) Wr(MB/s) Comp(sec) CompMergeCPU(sec) Comp(cnt) Avg(sec) KeyIn KeyDrop Rblob(GB) Wblob(GB) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ L0 2/0 31.54 MB 0.5 0.0 0.0 0.0 8.4 8.4 0.0 1.0 0.0 63.4 135.56 110.94 544 0.249 0 0 0.0 0.0 L4 3/0 96.55 MB 0.8 18.5 6.7 11.8 18.4 6.6 0.0 2.7 65.3 64.9 290.08 284.03 108 2.686 284M 1957K 0.0 0.0 L5 15/0 404.41 MB 1.0 19.1 7.7 11.4 18.8 7.4 0.3 2.5 66.6 65.7 292.93 285.34 220 1.332 293M 3808K 0.0 0.0 L6 143/0 4.12 GB 0.0 45.0 7.5 37.5 41.6 4.1 0.0 5.5 71.2 65.9 647.00 632.66 251 2.578 739M 47M 0.0 0.0 Sum 163/0 4.64 GB 0.0 82.6 21.9 60.7 87.2 26.5 0.3 10.4 61.9 65.4 1365.58 1312.97 1123 1.216 1318M 52M 0.0 0.0 ``` Compaction stats from main: ``` Level Files Size Score Read(GB) Rn(GB) Rnp1(GB) Write(GB) Wnew(GB) Moved(GB) W-Amp Rd(MB/s) Wr(MB/s) Comp(sec) CompMergeCPU(sec) Comp(cnt) Avg(sec) KeyIn KeyDrop Rblob(GB) Wblob(GB) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ L0 0/0 0.00 KB 0.0 0.0 0.0 0.0 8.4 8.4 0.0 1.0 0.0 60.5 142.12 115.89 569 0.250 0 0 0.0 0.0 L4 3/0 85.68 MB 1.0 17.7 6.8 10.9 17.6 6.7 0.0 2.6 62.7 62.3 289.05 281.79 112 2.581 272M 2309K 0.0 0.0 L5 11/0 293.73 MB 1.0 18.8 7.5 11.2 18.5 7.2 0.5 2.5 64.9 63.9 296.07 288.50 220 1.346 288M 4365K 0.0 0.0 L6 130/0 3.94 GB 0.0 51.5 7.6 43.9 47.9 3.9 0.0 6.3 67.2 62.4 784.95 765.92 258 3.042 848M 51M 0.0 0.0 Sum 144/0 4.31 GB 0.0 88.0 21.9 66.0 92.3 26.3 0.5 11.0 59.6 62.5 1512.19 1452.09 1159 1.305 1409M 58M 0.0 0.0``` Reviewed By: ajkr Differential Revision: D39834713 Pulled By: cbi42 fbshipit-source-id: fe9341040b8704a8fbb10cad5cf5c43e962c7e6b
2 years ago
}
}
}
TEST_SYNC_POINT("BuildTable:BeforeFinishBuildTable");
const bool empty = builder->IsEmpty();
if (num_input_entries != nullptr) {
Compare the number of input keys and processed keys for compactions (#11571) Summary: ... to improve data integrity validation during compaction. A new option `compaction_verify_record_count` is introduced for this verification and is enabled by default. One exception when the verification is not done is when a compaction filter returns kRemoveAndSkipUntil which can cause CompactionIterator to seek until some key and hence not able to keep track of the number of keys processed. For expected number of input keys, we sum over the number of total keys - number of range tombstones across compaction input files (`CompactionJob::UpdateCompactionStats()`). Table properties are consulted if `FileMetaData` is not initialized for some input file. Since table properties for all input files were also constructed during `DBImpl::NotifyOnCompactionBegin()`, `Compaction::GetTableProperties()` is introduced to reduce duplicated code. For actual number of keys processed, each subcompaction will record its number of keys processed to `sub_compact->compaction_job_stats.num_input_records` and aggregated when all subcompactions finish (`CompactionJob::AggregateCompactionStats()`). In the case when some subcompaction encountered kRemoveAndSkipUntil from compaction filter and does not have accurate count, it propagates this information through `sub_compact->compaction_job_stats.has_num_input_records`. Pull Request resolved: https://github.com/facebook/rocksdb/pull/11571 Test Plan: * Add a new unit test `DBCompactionTest.VerifyRecordCount` for the corruption case. * All other unit tests for non-corrupted case. * Ran crash test for a few hours: `python3 ./tools/db_crashtest.py whitebox --simple` Reviewed By: ajkr Differential Revision: D47131965 Pulled By: cbi42 fbshipit-source-id: cc8e94565dd526c4347e9d3843ecf32f6727af92
1 year ago
assert(c_iter.HasNumInputEntryScanned());
*num_input_entries =
Compare the number of input keys and processed keys for compactions (#11571) Summary: ... to improve data integrity validation during compaction. A new option `compaction_verify_record_count` is introduced for this verification and is enabled by default. One exception when the verification is not done is when a compaction filter returns kRemoveAndSkipUntil which can cause CompactionIterator to seek until some key and hence not able to keep track of the number of keys processed. For expected number of input keys, we sum over the number of total keys - number of range tombstones across compaction input files (`CompactionJob::UpdateCompactionStats()`). Table properties are consulted if `FileMetaData` is not initialized for some input file. Since table properties for all input files were also constructed during `DBImpl::NotifyOnCompactionBegin()`, `Compaction::GetTableProperties()` is introduced to reduce duplicated code. For actual number of keys processed, each subcompaction will record its number of keys processed to `sub_compact->compaction_job_stats.num_input_records` and aggregated when all subcompactions finish (`CompactionJob::AggregateCompactionStats()`). In the case when some subcompaction encountered kRemoveAndSkipUntil from compaction filter and does not have accurate count, it propagates this information through `sub_compact->compaction_job_stats.has_num_input_records`. Pull Request resolved: https://github.com/facebook/rocksdb/pull/11571 Test Plan: * Add a new unit test `DBCompactionTest.VerifyRecordCount` for the corruption case. * All other unit tests for non-corrupted case. * Ran crash test for a few hours: `python3 ./tools/db_crashtest.py whitebox --simple` Reviewed By: ajkr Differential Revision: D47131965 Pulled By: cbi42 fbshipit-source-id: cc8e94565dd526c4347e9d3843ecf32f6727af92
1 year ago
c_iter.NumInputEntryScanned() + num_unfragmented_tombstones;
}
Support for SingleDelete() Summary: This patch fixes #7460559. It introduces SingleDelete as a new database operation. This operation can be used to delete keys that were never overwritten (no put following another put of the same key). If an overwritten key is single deleted the behavior is undefined. Single deletion of a non-existent key has no effect but multiple consecutive single deletions are not allowed (see limitations). In contrast to the conventional Delete() operation, the deletion entry is removed along with the value when the two are lined up in a compaction. Note: The semantics are similar to @igor's prototype that allowed to have this behavior on the granularity of a column family ( https://reviews.facebook.net/D42093 ). This new patch, however, is more aggressive when it comes to removing tombstones: It removes the SingleDelete together with the value whenever there is no snapshot between them while the older patch only did this when the sequence number of the deletion was older than the earliest snapshot. Most of the complex additions are in the Compaction Iterator, all other changes should be relatively straightforward. The patch also includes basic support for single deletions in db_stress and db_bench. Limitations: - Not compatible with cuckoo hash tables - Single deletions cannot be used in combination with merges and normal deletions on the same key (other keys are not affected by this) - Consecutive single deletions are currently not allowed (and older version of this patch supported this so it could be resurrected if needed) Test Plan: make all check Reviewers: yhchiang, sdong, rven, anthony, yoshinorim, igor Reviewed By: igor Subscribers: maykov, dhruba, leveldb Differential Revision: https://reviews.facebook.net/D43179
9 years ago
if (!s.ok() || empty) {
builder->Abandon();
Support for SingleDelete() Summary: This patch fixes #7460559. It introduces SingleDelete as a new database operation. This operation can be used to delete keys that were never overwritten (no put following another put of the same key). If an overwritten key is single deleted the behavior is undefined. Single deletion of a non-existent key has no effect but multiple consecutive single deletions are not allowed (see limitations). In contrast to the conventional Delete() operation, the deletion entry is removed along with the value when the two are lined up in a compaction. Note: The semantics are similar to @igor's prototype that allowed to have this behavior on the granularity of a column family ( https://reviews.facebook.net/D42093 ). This new patch, however, is more aggressive when it comes to removing tombstones: It removes the SingleDelete together with the value whenever there is no snapshot between them while the older patch only did this when the sequence number of the deletion was older than the earliest snapshot. Most of the complex additions are in the Compaction Iterator, all other changes should be relatively straightforward. The patch also includes basic support for single deletions in db_stress and db_bench. Limitations: - Not compatible with cuckoo hash tables - Single deletions cannot be used in combination with merges and normal deletions on the same key (other keys are not affected by this) - Consecutive single deletions are currently not allowed (and older version of this patch supported this so it could be resurrected if needed) Test Plan: make all check Reviewers: yhchiang, sdong, rven, anthony, yoshinorim, igor Reviewed By: igor Subscribers: maykov, dhruba, leveldb Differential Revision: https://reviews.facebook.net/D43179
9 years ago
} else {
std::string seqno_time_mapping_str;
seqno_to_time_mapping.Encode(
seqno_time_mapping_str, meta->fd.smallest_seqno,
meta->fd.largest_seqno, meta->file_creation_time);
builder->SetSeqnoTimeTableProperties(
seqno_time_mapping_str,
ioptions.compaction_style == CompactionStyle::kCompactionStyleFIFO
? meta->file_creation_time
: meta->oldest_ancester_time);
Support for SingleDelete() Summary: This patch fixes #7460559. It introduces SingleDelete as a new database operation. This operation can be used to delete keys that were never overwritten (no put following another put of the same key). If an overwritten key is single deleted the behavior is undefined. Single deletion of a non-existent key has no effect but multiple consecutive single deletions are not allowed (see limitations). In contrast to the conventional Delete() operation, the deletion entry is removed along with the value when the two are lined up in a compaction. Note: The semantics are similar to @igor's prototype that allowed to have this behavior on the granularity of a column family ( https://reviews.facebook.net/D42093 ). This new patch, however, is more aggressive when it comes to removing tombstones: It removes the SingleDelete together with the value whenever there is no snapshot between them while the older patch only did this when the sequence number of the deletion was older than the earliest snapshot. Most of the complex additions are in the Compaction Iterator, all other changes should be relatively straightforward. The patch also includes basic support for single deletions in db_stress and db_bench. Limitations: - Not compatible with cuckoo hash tables - Single deletions cannot be used in combination with merges and normal deletions on the same key (other keys are not affected by this) - Consecutive single deletions are currently not allowed (and older version of this patch supported this so it could be resurrected if needed) Test Plan: make all check Reviewers: yhchiang, sdong, rven, anthony, yoshinorim, igor Reviewed By: igor Subscribers: maykov, dhruba, leveldb Differential Revision: https://reviews.facebook.net/D43179
9 years ago
s = builder->Finish();
}
if (io_status->ok()) {
*io_status = builder->io_status();
}
Support for SingleDelete() Summary: This patch fixes #7460559. It introduces SingleDelete as a new database operation. This operation can be used to delete keys that were never overwritten (no put following another put of the same key). If an overwritten key is single deleted the behavior is undefined. Single deletion of a non-existent key has no effect but multiple consecutive single deletions are not allowed (see limitations). In contrast to the conventional Delete() operation, the deletion entry is removed along with the value when the two are lined up in a compaction. Note: The semantics are similar to @igor's prototype that allowed to have this behavior on the granularity of a column family ( https://reviews.facebook.net/D42093 ). This new patch, however, is more aggressive when it comes to removing tombstones: It removes the SingleDelete together with the value whenever there is no snapshot between them while the older patch only did this when the sequence number of the deletion was older than the earliest snapshot. Most of the complex additions are in the Compaction Iterator, all other changes should be relatively straightforward. The patch also includes basic support for single deletions in db_stress and db_bench. Limitations: - Not compatible with cuckoo hash tables - Single deletions cannot be used in combination with merges and normal deletions on the same key (other keys are not affected by this) - Consecutive single deletions are currently not allowed (and older version of this patch supported this so it could be resurrected if needed) Test Plan: make all check Reviewers: yhchiang, sdong, rven, anthony, yoshinorim, igor Reviewed By: igor Subscribers: maykov, dhruba, leveldb Differential Revision: https://reviews.facebook.net/D43179
9 years ago
if (s.ok() && !empty) {
uint64_t file_size = builder->FileSize();
meta->fd.file_size = file_size;
Record and use the tail size to prefetch table tail (#11406) Summary: **Context:** We prefetch the tail part of a SST file (i.e, the blocks after data blocks till the end of the file) during each SST file open in hope to prefetch all the stuff at once ahead of time for later read e.g, footer, meta index, filter/index etc. The existing approach to estimate the tail size to prefetch is through `TailPrefetchStats` heuristics introduced in https://github.com/facebook/rocksdb/pull/4156, which has caused small reads in unlucky case (e.g, small read into the tail buffer during table open in thread 1 under the same BlockBasedTableFactory object can make thread 2's tail prefetching use a small size that it shouldn't) and is hard to debug. Therefore we decide to record the exact tail size and use it directly to prefetch tail of the SST instead of relying heuristics. **Summary:** - Obtain and record in manifest the tail size in `BlockBasedTableBuilder::Finish()` - For backward compatibility, we fall back to TailPrefetchStats and last to simple heuristics that the tail size is a linear portion of the file size - see PR conversation for more. - Make`tail_start_offset` part of the table properties and deduct tail size to record in manifest for external files (e.g, file ingestion, import CF) and db repair (with no access to manifest). Pull Request resolved: https://github.com/facebook/rocksdb/pull/11406 Test Plan: 1. New UT 2. db bench Note: db bench on /tmp/ where direct read is supported is too slow to finish and the default pinning setting in db bench is not helpful to profile # sst read of Get. Therefore I hacked the following to obtain the following comparison. ``` diff --git a/table/block_based/block_based_table_reader.cc b/table/block_based/block_based_table_reader.cc index bd5669f0f..791484c1f 100644 --- a/table/block_based/block_based_table_reader.cc +++ b/table/block_based/block_based_table_reader.cc @@ -838,7 +838,7 @@ Status BlockBasedTable::PrefetchTail( &tail_prefetch_size); // Try file system prefetch - if (!file->use_direct_io() && !force_direct_prefetch) { + if (false && !file->use_direct_io() && !force_direct_prefetch) { if (!file->Prefetch(prefetch_off, prefetch_len, ro.rate_limiter_priority) .IsNotSupported()) { prefetch_buffer->reset(new FilePrefetchBuffer( diff --git a/tools/db_bench_tool.cc b/tools/db_bench_tool.cc index ea40f5fa0..39a0ac385 100644 --- a/tools/db_bench_tool.cc +++ b/tools/db_bench_tool.cc @@ -4191,6 +4191,8 @@ class Benchmark { std::shared_ptr<TableFactory>(NewCuckooTableFactory(table_options)); } else { BlockBasedTableOptions block_based_options; + block_based_options.metadata_cache_options.partition_pinning = + PinningTier::kAll; block_based_options.checksum = static_cast<ChecksumType>(FLAGS_checksum_type); if (FLAGS_use_hash_search) { ``` Create DB ``` ./db_bench --bloom_bits=3 --use_existing_db=1 --seed=1682546046158958 --partition_index_and_filters=1 --statistics=1 -db=/dev/shm/testdb/ -benchmarks=readrandom -key_size=3200 -value_size=512 -num=1000000 -write_buffer_size=6550000 -disable_auto_compactions=false -target_file_size_base=6550000 -compression_type=none ``` ReadRandom ``` ./db_bench --bloom_bits=3 --use_existing_db=1 --seed=1682546046158958 --partition_index_and_filters=1 --statistics=1 -db=/dev/shm/testdb/ -benchmarks=readrandom -key_size=3200 -value_size=512 -num=1000000 -write_buffer_size=6550000 -disable_auto_compactions=false -target_file_size_base=6550000 -compression_type=none ``` (a) Existing (Use TailPrefetchStats for tail size + use seperate prefetch buffer in PartitionedFilter/IndexReader::CacheDependencies()) ``` rocksdb.table.open.prefetch.tail.hit COUNT : 3395 rocksdb.sst.read.micros P50 : 5.655570 P95 : 9.931396 P99 : 14.845454 P100 : 585.000000 COUNT : 999905 SUM : 6590614 ``` (b) This PR (Record tail size + use the same tail buffer in PartitionedFilter/IndexReader::CacheDependencies()) ``` rocksdb.table.open.prefetch.tail.hit COUNT : 14257 rocksdb.sst.read.micros P50 : 5.173347 P95 : 9.015017 P99 : 12.912610 P100 : 228.000000 COUNT : 998547 SUM : 5976540 ``` As we can see, we increase the prefetch tail hit count and decrease SST read count with this PR 3. Test backward compatibility by stepping through reading with post-PR code on a db generated pre-PR. Reviewed By: pdillinger Differential Revision: D45413346 Pulled By: hx235 fbshipit-source-id: 7d5e36a60a72477218f79905168d688452a4c064
2 years ago
meta->tail_size = builder->GetTailSize();
meta->marked_for_compaction = builder->NeedCompact();
meta->user_defined_timestamps_persisted =
ioptions.persist_user_defined_timestamps;
assert(meta->fd.GetFileSize() > 0);
tp = builder
->GetTableProperties(); // refresh now that builder is finished
Added memtable garbage statistics (#8411) Summary: **Summary**: 2 new statistics counters are added to RocksDB: `MEMTABLE_PAYLOAD_BYTES_AT_FLUSH` and `MEMTABLE_GARBAGE_BYTES_AT_FLUSH`. The former tracks how many raw bytes of useful data are present on the memtable at flush time, whereas the latter is tracks how many of these raw bytes are considered garbage, meaning that they ended up not being imported on the SSTables resulting from the flush operations. **Unit test**: run `make db_flush_test -j$(nproc); ./db_flush_test` to run the unit test. This executable includes 3 tests, that test support and correct stat calculations for workloads with inserts, deletes, and DeleteRanges. The parameters are set such that the workloads are performed on a single memtable, and a single SSTable is created as a result of the flush operation. The flush operation is manually called in the test file. The tests verify that the values of these 2 statistics counters introduced in this PR can be exactly predicted, showing that we have a full understanding of the underlying operations. **Performance testing**: `./db_bench -statistics -benchmarks=fillrandom -num=10000000` repeated 10 times. Timing done using "date" function in a bash script. _Results_: Original Rocksdb fork: mean 66.6 sec, std 1.18 sec. This feature branch: mean 67.4 sec, std 1.35 sec. Pull Request resolved: https://github.com/facebook/rocksdb/pull/8411 Reviewed By: akankshamahajan15 Differential Revision: D29150629 Pulled By: bjlemaire fbshipit-source-id: 7b3c2e86d50c6aa34fa50fd134282eacb543a5b1
3 years ago
if (memtable_payload_bytes != nullptr &&
memtable_garbage_bytes != nullptr) {
const CompactionIterationStats& ci_stats = c_iter.iter_stats();
uint64_t total_payload_bytes = ci_stats.total_input_raw_key_bytes +
ci_stats.total_input_raw_value_bytes +
total_tombstone_payload_bytes;
uint64_t total_payload_bytes_written =
(tp.raw_key_size + tp.raw_value_size);
// Prevent underflow, which may still happen at this point
// since we only support inserts, deletes, and deleteRanges.
if (total_payload_bytes_written <= total_payload_bytes) {
*memtable_payload_bytes = total_payload_bytes;
*memtable_garbage_bytes =
total_payload_bytes - total_payload_bytes_written;
} else {
*memtable_payload_bytes = 0;
*memtable_garbage_bytes = 0;
}
}
if (table_properties) {
*table_properties = tp;
}
}
delete builder;
// Finish and check for file errors
TEST_SYNC_POINT("BuildTable:BeforeSyncTable");
if (s.ok() && !empty) {
StopWatch sw(ioptions.clock, ioptions.stats, TABLE_SYNC_MICROS);
*io_status = file_writer->Sync(ioptions.use_fsync);
}
TEST_SYNC_POINT("BuildTable:BeforeCloseTableFile");
if (s.ok() && io_status->ok() && !empty) {
*io_status = file_writer->Close();
}
if (s.ok() && io_status->ok() && !empty) {
// Add the checksum information to file metadata.
meta->file_checksum = file_writer->GetFileChecksum();
meta->file_checksum_func_name = file_writer->GetFileChecksumFuncName();
file_checksum = meta->file_checksum;
file_checksum_func_name = meta->file_checksum_func_name;
// Set unique_id only if db_id and db_session_id exist
if (!tboptions.db_id.empty() && !tboptions.db_session_id.empty()) {
if (!GetSstInternalUniqueId(tboptions.db_id, tboptions.db_session_id,
meta->fd.GetNumber(), &(meta->unique_id))
.ok()) {
// if failed to get unique id, just set it Null
meta->unique_id = kNullUniqueId64x2;
}
}
}
if (s.ok()) {
s = *io_status;
}
Logically strip timestamp during flush (#11557) Summary: Logically strip the user-defined timestamp when L0 files are created during flush when `AdvancedColumnFamilyOptions.persist_user_defined_timestamps` is false. Logically stripping timestamp here means replacing the original user-defined timestamp with a mininum timestamp, which for now is hard coded to be all zeros bytes. While working on this, I caught a missing piece on the `BlockBuilder` level for this feature. The current quick path `std::min(buffer_size, last_key_size)` needs a bit tweaking to work for this feature. When user-defined timestamp is stripped during block building, on writing first entry or right after resetting, `buffer` is empty and `buffer_size` is zero as usual. However, in follow-up writes, depending on the size of the stripped user-defined timestamp, and the size of the value, what's in `buffer` can sometimes be smaller than `last_key_size`, leading `std::min(buffer_size, last_key_size)` to truncate the `last_key`. Previous test doesn't caught the bug because in those tests, the size of the stripped user-defined timestamps bytes is smaller than the length of the value. In order to avoid the conditional operation, this PR changed the original trivial `std::min` operation into an arithmetic operation. Since this is a change in a hot and performance critical path, I did the following benchmark to check no observable regression is introduced. ```TEST_TMPDIR=/dev/shm/rocksdb1 ./db_bench -benchmarks=fillseq -memtablerep=vector -allow_concurrent_memtable_write=false -num=50000000``` Compiled with DEBUG_LEVEL=0 Test vs. control runs simulaneous for better accuracy, units = ops/sec PR vs base: Round 1: 350652 vs 349055 Round 2: 365733 vs 364308 Round 3: 355681 vs 354475 Pull Request resolved: https://github.com/facebook/rocksdb/pull/11557 Test Plan: New timestamp specific test added or existing tests augmented, both are parameterized with `UserDefinedTimestampTestMode`: `UserDefinedTimestampTestMode::kNormal` -> UDT feature enabled, write / read with min timestamp `UserDefinedTimestampTestMode::kStripUserDefinedTimestamps` -> UDT feature enabled, write / read with min timestamp, set Options.persist_user_defined_timestamps to false. ``` make all check ./db_wal_test --gtest_filter="*WithTimestamp*" ./flush_job_test --gtest_filter="*WithTimestamp*" ./repair_test --gtest_filter="*WithTimestamp*" ./block_based_table_reader_test ``` Reviewed By: pdillinger Differential Revision: D47027664 Pulled By: jowlyzhang fbshipit-source-id: e729193b6334dfc63aaa736d684d907a022571f5
1 year ago
// TODO(yuzhangyu): handle the key copy in the blob when ts should be
// stripped.
if (blob_file_builder) {
if (s.ok()) {
s = blob_file_builder->Finish();
} else {
blob_file_builder->Abandon(s);
}
blob_file_builder.reset();
}
// TODO Also check the IO status when create the Iterator.
TEST_SYNC_POINT("BuildTable:BeforeOutputValidation");
Support for SingleDelete() Summary: This patch fixes #7460559. It introduces SingleDelete as a new database operation. This operation can be used to delete keys that were never overwritten (no put following another put of the same key). If an overwritten key is single deleted the behavior is undefined. Single deletion of a non-existent key has no effect but multiple consecutive single deletions are not allowed (see limitations). In contrast to the conventional Delete() operation, the deletion entry is removed along with the value when the two are lined up in a compaction. Note: The semantics are similar to @igor's prototype that allowed to have this behavior on the granularity of a column family ( https://reviews.facebook.net/D42093 ). This new patch, however, is more aggressive when it comes to removing tombstones: It removes the SingleDelete together with the value whenever there is no snapshot between them while the older patch only did this when the sequence number of the deletion was older than the earliest snapshot. Most of the complex additions are in the Compaction Iterator, all other changes should be relatively straightforward. The patch also includes basic support for single deletions in db_stress and db_bench. Limitations: - Not compatible with cuckoo hash tables - Single deletions cannot be used in combination with merges and normal deletions on the same key (other keys are not affected by this) - Consecutive single deletions are currently not allowed (and older version of this patch supported this so it could be resurrected if needed) Test Plan: make all check Reviewers: yhchiang, sdong, rven, anthony, yoshinorim, igor Reviewed By: igor Subscribers: maykov, dhruba, leveldb Differential Revision: https://reviews.facebook.net/D43179
9 years ago
if (s.ok() && !empty) {
// Verify that the table is usable
// We set for_compaction to false and don't OptimizeForCompactionTableRead
// here because this is a special case after we finish the table building.
// No matter whether use_direct_io_for_flush_and_compaction is true,
// the goal is to cache it here for further user reads.
std::unique_ptr<InternalIterator> it(table_cache->NewIterator(
read_options, file_options, tboptions.internal_comparator, *meta,
Fast path for detecting unchanged prefix_extractor (#9407) Summary: Fixes a major performance regression in 6.26, where extra CPU is spent in SliceTransform::AsString when reads involve a prefix_extractor (Get, MultiGet, Seek). Common case performance is now better than 6.25. This change creates a "fast path" for verifying that the current prefix extractor is unchanged and compatible with what was used to generate a table file. This fast path detects the common case by pointer comparison on the current prefix_extractor and a "known good" prefix extractor (if applicable) that is saved at the time the table reader is opened. The "known good" prefix extractor is saved as another shared_ptr copy (in an existing field, however) to ensure the pointer is not recycled. When the prefix_extractor has changed to a different instance but same compatible configuration (rare, odd), performance is still a regression compared to 6.25, but this is likely acceptable because of the oddity of such a case. The performance of incompatible prefix_extractor is essentially unchanged. Also fixed a minor case (ForwardIterator) where a prefix_extractor could be used via a raw pointer after being freed as a shared_ptr, if replaced via SetOptions. Pull Request resolved: https://github.com/facebook/rocksdb/pull/9407 Test Plan: ## Performance Populate DB with `TEST_TMPDIR=/dev/shm/rocksdb ./db_bench -benchmarks=fillrandom -num=10000000 -disable_wal=1 -write_buffer_size=10000000 -bloom_bits=16 -compaction_style=2 -fifo_compaction_max_table_files_size_mb=10000 -fifo_compaction_allow_compaction=0 -prefix_size=12` Running head-to-head comparisons simultaneously with `TEST_TMPDIR=/dev/shm/rocksdb ./db_bench -use_existing_db -readonly -benchmarks=seekrandom -num=10000000 -duration=20 -disable_wal=1 -bloom_bits=16 -compaction_style=2 -fifo_compaction_max_table_files_size_mb=10000 -fifo_compaction_allow_compaction=0 -prefix_size=12` Below each is compared by ops/sec vs. baseline which is version 6.25 (multiple baseline runs because of variable machine load) v6.26: 4833 vs. 6698 (<- major regression!) v6.27: 4737 vs. 6397 (still) New: 6704 vs. 6461 (better than baseline in common case) Disabled fastpath: 4843 vs. 6389 (e.g. if prefix extractor instance changes but is still compatible) Changed prefix size (no usable filter) in new: 787 vs. 5927 Changed prefix size (no usable filter) in new & baseline: 773 vs. 784 Reviewed By: mrambacher Differential Revision: D33677812 Pulled By: pdillinger fbshipit-source-id: 571d9711c461fb97f957378a061b7e7dbc4d6a76
3 years ago
nullptr /* range_del_agg */, mutable_cf_options.prefix_extractor,
nullptr,
(internal_stats == nullptr) ? nullptr
: internal_stats->GetFileReadHist(0),
TableReaderCaller::kFlush, /*arena=*/nullptr,
Add more LSM info to FilterBuildingContext (#8246) Summary: Add `num_levels`, `is_bottommost`, and table file creation `reason` to `FilterBuildingContext`, in anticipation of more powerful Bloom-like filter support. To support this, added `is_bottommost` and `reason` to `TableBuilderOptions`, which allowed removing `reason` parameter from `rocksdb::BuildTable`. I attempted to remove `skip_filters` from `TableBuilderOptions`, because filter construction decisions should arise from options, not one-off parameters. I could not completely remove it because the public API for SstFileWriter takes a `skip_filters` parameter, and translating this into an option change would mean awkwardly replacing the table_factory if it is BlockBasedTableFactory with new filter_policy=nullptr option. I marked this public skip_filters option as deprecated because of this oddity. (skip_filters on the read side probably makes sense.) At least `skip_filters` is now largely hidden for users of `TableBuilderOptions` and is no longer used for implementing the optimize_filters_for_hits option. Bringing the logic for that option closer to handling of FilterBuildingContext makes it more obvious that hese two are using the same notion of "bottommost." (Planned: configuration options for Bloom-like filters that generalize `optimize_filters_for_hits`) Recommended follow-up: Try to get away from "bottommost level" naming of things, which is inaccurate (see VersionStorageInfo::RangeMightExistAfterSortedRun), and move to "bottommost run" or just "bottommost." Pull Request resolved: https://github.com/facebook/rocksdb/pull/8246 Test Plan: extended an existing unit test to exercise and check various filter building contexts. Also, existing tests for optimize_filters_for_hits validate some of the "bottommost" handling, which is now closely connected to FilterBuildingContext::is_bottommost through TableBuilderOptions::is_bottommost Reviewed By: mrambacher Differential Revision: D28099346 Pulled By: pdillinger fbshipit-source-id: 2c1072e29c24d4ac404c761a7b7663292372600a
4 years ago
/*skip_filter=*/false, tboptions.level_at_creation,
MaxFileSizeForL0MetaPin(mutable_cf_options),
/*smallest_compaction_key=*/nullptr,
Properly report IO errors when IndexType::kBinarySearchWithFirstKey is used (#6621) Summary: Context: Index type `kBinarySearchWithFirstKey` added the ability for sst file iterator to sometimes report a key from index without reading the corresponding data block. This is useful when sst blocks are cut at some meaningful boundaries (e.g. one block per key prefix), and many seeks land between blocks (e.g. for each prefix, the ranges of keys in different sst files are nearly disjoint, so a typical seek needs to read a data block from only one file even if all files have the prefix). But this added a new error condition, which rocksdb code was really not equipped to deal with: `InternalIterator::value()` may fail with an IO error or Status::Incomplete, but it's just a method returning a Slice, with no way to report error instead. Before this PR, this type of error wasn't handled at all (an empty slice was returned), and kBinarySearchWithFirstKey implementation was considered a prototype. Now that we (LogDevice) have experimented with kBinarySearchWithFirstKey for a while and confirmed that it's really useful, this PR is adding the missing error handling. It's a pretty inconvenient situation implementation-wise. The error needs to be reported from InternalIterator when trying to access value. But there are ~700 call sites of `InternalIterator::value()`, most of which either can't hit the error condition (because the iterator is reading from memtable or from index or something) or wouldn't benefit from the deferred loading of the value (e.g. compaction iterator that reads all values anyway). Adding error handling to all these call sites would needlessly bloat the code. So instead I made the deferred value loading optional: only the call sites that may use deferred loading have to call the new method `PrepareValue()` before calling `value()`. The feature is enabled with a new bool argument `allow_unprepared_value` to a bunch of methods that create iterators (it wouldn't make sense to put it in ReadOptions because it's completely internal to iterators, with virtually no user-visible effect). Lmk if you have better ideas. Note that the deferred value loading only happens for *internal* iterators. The user-visible iterator (DBIter) always prepares the value before returning from Seek/Next/etc. We could go further and add an API to defer that value loading too, but that's most likely not useful for LogDevice, so it doesn't seem worth the complexity for now. Pull Request resolved: https://github.com/facebook/rocksdb/pull/6621 Test Plan: make -j5 check . Will also deploy to some logdevice test clusters and look at stats. Reviewed By: siying Differential Revision: D20786930 Pulled By: al13n321 fbshipit-source-id: 6da77d918bad3780522e918f17f4d5513d3e99ee
5 years ago
/*largest_compaction_key*/ nullptr,
Block per key-value checksum (#11287) Summary: add option `block_protection_bytes_per_key` and implementation for block per key-value checksum. The main changes are 1. checksum construction and verification in block.cc/h 2. pass the option `block_protection_bytes_per_key` around (mainly for methods defined in table_cache.h) 3. unit tests/crash test updates Tests: * Added unit tests * Crash test: `python3 tools/db_crashtest.py blackbox --simple --block_protection_bytes_per_key=1 --write_buffer_size=1048576` Follow up (maybe as a separate PR): make sure corruption status returned from BlockIters are correctly handled. Performance: Turning on block per KV protection has a non-trivial negative impact on read performance and costs additional memory. For memory, each block includes additional 24 bytes for checksum-related states beside checksum itself. For CPU, I set up a DB of size ~1.2GB with 5M keys (32 bytes key and 200 bytes value) which compacts to ~5 SST files (target file size 256 MB) in L6 without compression. I tested readrandom performance with various block cache size (to mimic various cache hit rates): ``` SETUP make OPTIMIZE_LEVEL="-O3" USE_LTO=1 DEBUG_LEVEL=0 -j32 db_bench ./db_bench -benchmarks=fillseq,compact0,waitforcompaction,compact,waitforcompaction -write_buffer_size=33554432 -level_compaction_dynamic_level_bytes=true -max_background_jobs=8 -target_file_size_base=268435456 --num=5000000 --key_size=32 --value_size=200 --compression_type=none BENCHMARK ./db_bench --use_existing_db -benchmarks=readtocache,readrandom[-X10] --num=5000000 --key_size=32 --disable_auto_compactions --reads=1000000 --block_protection_bytes_per_key=[0|1] --cache_size=$CACHESIZE The readrandom ops/sec looks like the following: Block cache size: 2GB 1.2GB * 0.9 1.2GB * 0.8 1.2GB * 0.5 8MB Main 240805 223604 198176 161653 139040 PR prot_bytes=0 238691 226693 200127 161082 141153 PR prot_bytes=1 214983 193199 178532 137013 108211 prot_bytes=1 vs -10% -15% -10.8% -15% -23% prot_bytes=0 ``` The benchmark has a lot of variance, but there was a 5% to 25% regression in this benchmark with different cache hit rates. Pull Request resolved: https://github.com/facebook/rocksdb/pull/11287 Reviewed By: ajkr Differential Revision: D43970708 Pulled By: cbi42 fbshipit-source-id: ef98d898b71779846fa74212b9ec9e08b7183940
2 years ago
/*allow_unprepared_value*/ false,
mutable_cf_options.block_protection_bytes_per_key));
s = it->status();
if (s.ok() && paranoid_file_checks) {
OutputValidator file_validator(tboptions.internal_comparator,
/*enable_order_check=*/true,
/*enable_hash=*/true);
Support for SingleDelete() Summary: This patch fixes #7460559. It introduces SingleDelete as a new database operation. This operation can be used to delete keys that were never overwritten (no put following another put of the same key). If an overwritten key is single deleted the behavior is undefined. Single deletion of a non-existent key has no effect but multiple consecutive single deletions are not allowed (see limitations). In contrast to the conventional Delete() operation, the deletion entry is removed along with the value when the two are lined up in a compaction. Note: The semantics are similar to @igor's prototype that allowed to have this behavior on the granularity of a column family ( https://reviews.facebook.net/D42093 ). This new patch, however, is more aggressive when it comes to removing tombstones: It removes the SingleDelete together with the value whenever there is no snapshot between them while the older patch only did this when the sequence number of the deletion was older than the earliest snapshot. Most of the complex additions are in the Compaction Iterator, all other changes should be relatively straightforward. The patch also includes basic support for single deletions in db_stress and db_bench. Limitations: - Not compatible with cuckoo hash tables - Single deletions cannot be used in combination with merges and normal deletions on the same key (other keys are not affected by this) - Consecutive single deletions are currently not allowed (and older version of this patch supported this so it could be resurrected if needed) Test Plan: make all check Reviewers: yhchiang, sdong, rven, anthony, yoshinorim, igor Reviewed By: igor Subscribers: maykov, dhruba, leveldb Differential Revision: https://reviews.facebook.net/D43179
9 years ago
for (it->SeekToFirst(); it->Valid(); it->Next()) {
// Generate a rolling 64-bit hash of the key and values
file_validator.Add(it->key(), it->value()).PermitUncheckedError();
Support for SingleDelete() Summary: This patch fixes #7460559. It introduces SingleDelete as a new database operation. This operation can be used to delete keys that were never overwritten (no put following another put of the same key). If an overwritten key is single deleted the behavior is undefined. Single deletion of a non-existent key has no effect but multiple consecutive single deletions are not allowed (see limitations). In contrast to the conventional Delete() operation, the deletion entry is removed along with the value when the two are lined up in a compaction. Note: The semantics are similar to @igor's prototype that allowed to have this behavior on the granularity of a column family ( https://reviews.facebook.net/D42093 ). This new patch, however, is more aggressive when it comes to removing tombstones: It removes the SingleDelete together with the value whenever there is no snapshot between them while the older patch only did this when the sequence number of the deletion was older than the earliest snapshot. Most of the complex additions are in the Compaction Iterator, all other changes should be relatively straightforward. The patch also includes basic support for single deletions in db_stress and db_bench. Limitations: - Not compatible with cuckoo hash tables - Single deletions cannot be used in combination with merges and normal deletions on the same key (other keys are not affected by this) - Consecutive single deletions are currently not allowed (and older version of this patch supported this so it could be resurrected if needed) Test Plan: make all check Reviewers: yhchiang, sdong, rven, anthony, yoshinorim, igor Reviewed By: igor Subscribers: maykov, dhruba, leveldb Differential Revision: https://reviews.facebook.net/D43179
9 years ago
}
s = it->status();
if (s.ok() && !output_validator.CompareValidator(file_validator)) {
s = Status::Corruption("Paranoid checksums do not match");
}
}
}
}
// Check for input iterator errors
if (!iter->status().ok()) {
s = iter->status();
}
Support for SingleDelete() Summary: This patch fixes #7460559. It introduces SingleDelete as a new database operation. This operation can be used to delete keys that were never overwritten (no put following another put of the same key). If an overwritten key is single deleted the behavior is undefined. Single deletion of a non-existent key has no effect but multiple consecutive single deletions are not allowed (see limitations). In contrast to the conventional Delete() operation, the deletion entry is removed along with the value when the two are lined up in a compaction. Note: The semantics are similar to @igor's prototype that allowed to have this behavior on the granularity of a column family ( https://reviews.facebook.net/D42093 ). This new patch, however, is more aggressive when it comes to removing tombstones: It removes the SingleDelete together with the value whenever there is no snapshot between them while the older patch only did this when the sequence number of the deletion was older than the earliest snapshot. Most of the complex additions are in the Compaction Iterator, all other changes should be relatively straightforward. The patch also includes basic support for single deletions in db_stress and db_bench. Limitations: - Not compatible with cuckoo hash tables - Single deletions cannot be used in combination with merges and normal deletions on the same key (other keys are not affected by this) - Consecutive single deletions are currently not allowed (and older version of this patch supported this so it could be resurrected if needed) Test Plan: make all check Reviewers: yhchiang, sdong, rven, anthony, yoshinorim, igor Reviewed By: igor Subscribers: maykov, dhruba, leveldb Differential Revision: https://reviews.facebook.net/D43179
9 years ago
if (!s.ok() || meta->fd.GetFileSize() == 0) {
TEST_SYNC_POINT("BuildTable:BeforeDeleteFile");
constexpr IODebugContext* dbg = nullptr;
if (table_file_created) {
Status ignored = fs->DeleteFile(fname, IOOptions(), dbg);
ignored.PermitUncheckedError();
}
assert(blob_file_additions || blob_file_paths.empty());
if (blob_file_additions) {
for (const std::string& blob_file_path : blob_file_paths) {
Status ignored = DeleteDBFile(&db_options, blob_file_path, dbname,
/*force_bg=*/false, /*force_fg=*/false);
ignored.PermitUncheckedError();
TEST_SYNC_POINT("BuildTable::AfterDeleteFile");
}
}
}
Status status_for_listener = s;
if (meta->fd.GetFileSize() == 0) {
fname = "(nil)";
if (s.ok()) {
status_for_listener = Status::Aborted("Empty SST file not kept");
}
}
// Output to event logger and fire events.
EventHelpers::LogAndNotifyTableFileCreationFinished(
event_logger, ioptions.listeners, dbname, tboptions.column_family_name,
Add more LSM info to FilterBuildingContext (#8246) Summary: Add `num_levels`, `is_bottommost`, and table file creation `reason` to `FilterBuildingContext`, in anticipation of more powerful Bloom-like filter support. To support this, added `is_bottommost` and `reason` to `TableBuilderOptions`, which allowed removing `reason` parameter from `rocksdb::BuildTable`. I attempted to remove `skip_filters` from `TableBuilderOptions`, because filter construction decisions should arise from options, not one-off parameters. I could not completely remove it because the public API for SstFileWriter takes a `skip_filters` parameter, and translating this into an option change would mean awkwardly replacing the table_factory if it is BlockBasedTableFactory with new filter_policy=nullptr option. I marked this public skip_filters option as deprecated because of this oddity. (skip_filters on the read side probably makes sense.) At least `skip_filters` is now largely hidden for users of `TableBuilderOptions` and is no longer used for implementing the optimize_filters_for_hits option. Bringing the logic for that option closer to handling of FilterBuildingContext makes it more obvious that hese two are using the same notion of "bottommost." (Planned: configuration options for Bloom-like filters that generalize `optimize_filters_for_hits`) Recommended follow-up: Try to get away from "bottommost level" naming of things, which is inaccurate (see VersionStorageInfo::RangeMightExistAfterSortedRun), and move to "bottommost run" or just "bottommost." Pull Request resolved: https://github.com/facebook/rocksdb/pull/8246 Test Plan: extended an existing unit test to exercise and check various filter building contexts. Also, existing tests for optimize_filters_for_hits validate some of the "bottommost" handling, which is now closely connected to FilterBuildingContext::is_bottommost through TableBuilderOptions::is_bottommost Reviewed By: mrambacher Differential Revision: D28099346 Pulled By: pdillinger fbshipit-source-id: 2c1072e29c24d4ac404c761a7b7663292372600a
4 years ago
fname, job_id, meta->fd, meta->oldest_blob_file_number, tp,
tboptions.reason, status_for_listener, file_checksum,
file_checksum_func_name);
return s;
}
} // namespace ROCKSDB_NAMESPACE