Summary:
Compaction iterator keep a copy of list of live snapshots at the beginning of compaction, and then query snapshot checker to verify if values of a sequence number is visible to these snapshots. However when the snapshot is released in the middle of compaction, the snapshot checker implementation (i.e. WritePreparedSnapshotChecker) may remove info with the snapshot and may report incorrect result, which lead to values being compacted out when it shouldn't. This patch conservatively keep the values if snapshot checker determines that the snapshots is released.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4858
Differential Revision: D13617146
Pulled By: maysamyabandeh
fbshipit-source-id: cf18a94f6f61a94bcff73c280f117b224af5fbc3
Summary:
Now that v2 is fully functional, the v1 aggregator is removed.
The v2 aggregator has been renamed.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4778
Differential Revision: D13495930
Pulled By: abhimadan
fbshipit-source-id: 9d69500a60a283e79b6c4fa938fc68a8aa4d40d6
Summary:
RangeDelAggregatorV2 now supports ShouldDelete calls on
snapshot stripes and creation of range tombstone compaction iterators.
RangeDelAggregator is no longer used on any non-test code path, and will
be removed in a future commit.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4758
Differential Revision: D13439254
Pulled By: abhimadan
fbshipit-source-id: fe105bcf8e3d4a2df37a622d5510843cd71b0401
Summary:
This PR fixes issue 3842. We drop deletion markers iff
1. We are the bottom most level AND
2. All other occurrences of the key are in the same snapshot range as the delete
I've also enhanced db_stress_test to add an option that does a full compare of the keys. This is done by a single thread (thread # 0). For tests I've run (so far)
make check -j64
db_stress
db_stress --acquire_snapshot_one_in=1000 --ops_per_thread=100000 /* to verify that new code doesnt break existing tests */
./db_stress --compare_full_db_state_snapshot=true --acquire_snapshot_one_in=1000 --ops_per_thread=100000 /* to verify new test code */
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4289
Differential Revision: D9491165
Pulled By: shrikanthshankar
fbshipit-source-id: ce144834f31736c189aaca81bed356ba990331e2
Summary:
We want to sample the file I/O issued by RocksDB and report the function calls. This requires us to include the file paths otherwise it's hard to tell what has been going on.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4039
Differential Revision: D8670178
Pulled By: riversand963
fbshipit-source-id: 97ee806d1c583a2983e28e213ee764dc6ac28f7a
Summary:
For example calling CompactionFilter is always timed and gives the user no way to disable.
This PR will disable the timer if `Statistics::stats_level_` (which is part of DBOptions) is `kExceptDetailedTimers`
Closes https://github.com/facebook/rocksdb/pull/4029
Differential Revision: D8583670
Pulled By: miasantreble
fbshipit-source-id: 913be9fe433ae0c06e88193b59d41920a532307f
Summary:
Red diff to remove existing implementation of garbage collection. The current approach is reference counting kind of approach and require a lot of effort to get the size counter right on compaction and deletion. I'm going to go with a simple mark-sweep kind of approach and will send another PR for that.
CompactionEventListener was added solely for blob db and it adds complexity and overhead to compaction iterator. Removing it as well.
Closes https://github.com/facebook/rocksdb/pull/3551
Differential Revision: D7130190
Pulled By: yiwu-arbug
fbshipit-source-id: c3a375ad2639a3f6ed179df6eda602372cc5b8df
Summary:
CompactionIterator invoke MergeHelper::MergeUntil() to do partial merge between snapshot boundaries. Previously it only depend on sequence number to tell snapshot boundary, but we also need to make use of snapshot_checker to verify visibility of the merge operands to the snapshots. For example, say there is a snapshot with seq = 2 but only can see data with seq <= 1. There are three merges, each with seq = 1, 2, 3. A correct compaction output would be (1),(2+3). Without taking snapshot_checker into account when generating merge result, compaction will generate output (1+2),(3).
By filtering uncommitted keys with read callback, the read path already take care of merges well and don't need additional updates.
Closes https://github.com/facebook/rocksdb/pull/3475
Differential Revision: D6926087
Pulled By: yiwu-arbug
fbshipit-source-id: 8f539d6f897cfe29b6dc27a8992f68c2a629d40a
Summary:
Update compaction_iterator_test with write-prepared transaction DB related tests. Transaction related tests are group in CompactionIteratorWithSnapshotCheckerTest. The existing test are duplicated to make them also test with dummy SnapshotChecker that will say every key is visible to every snapshot (this is okay, we still compare sequence number to verify visibility). Merge related tests are disabled and will be revisit in another PR.
Existing db_iterator_tests are also duplicated to test with dummy read_callback that will say every key is committed.
Closes https://github.com/facebook/rocksdb/pull/3466
Differential Revision: D6909253
Pulled By: yiwu-arbug
fbshipit-source-id: 2ae4656b843a55e2e9ff8beecf21f2832f96cd25
Summary:
The motivation for this PR is to add to RocksDB support for differential (incremental) snapshots, as snapshot of the DB changes between two points in time (one can think of it as diff between to sequence numbers, or the diff D which can be thought of as an SST file or just set of KVs that can be applied to sequence number S1 to get the database to the state at sequence number S2).
This feature would be useful for various distributed storages layers built on top of RocksDB, as it should help reduce resources (time and network bandwidth) needed to recover and rebuilt DB instances as replicas in the context of distributed storages.
From the API standpoint that would like client app requesting iterator between (start seqnum) and current DB state, and reading the "diff".
This is a very draft PR for initial review in the discussion on the approach, i'm going to rework some parts and keep updating the PR.
For now, what's done here according to initial discussions:
Preserving deletes:
- We want to be able to optionally preserve recent deletes for some defined period of time, so that if a delete came in recently and might need to be included in the next incremental snapshot it would't get dropped by a compaction. This is done by adding new param to Options (preserve deletes flag) and new variable to DB Impl where we keep track of the sequence number after which we don't want to drop tombstones, even if they are otherwise eligible for deletion.
- I also added a new API call for clients to be able to advance this cutoff seqnum after which we drop deletes; i assume it's more flexible to let clients control this, since otherwise we'd need to keep some kind of timestamp < -- > seqnum mapping inside the DB, which sounds messy and painful to support. Clients could make use of it by periodically calling GetLatestSequenceNumber(), noting the timestamp, doing some calculation and figuring out by how much we need to advance the cutoff seqnum.
- Compaction codepath in compaction_iterator.cc has been modified to avoid dropping tombstones with seqnum > cutoff seqnum.
Iterator changes:
- couple params added to ReadOptions, to optionally allow client to request internal keys instead of user keys (so that client can get the latest value of a key, be it delete marker or a put), as well as min timestamp and min seqnum.
TableCache changes:
- I modified table_cache code to be able to quickly exclude SST files from iterators heep if creation_time on the file is less then iter_start_ts as passed in ReadOptions. That would help a lot in some DB settings (like reading very recent data only or using FIFO compactions), but not so much for universal compaction with more or less long iterator time span.
What's left:
- Still looking at how to best plug that inside DBIter codepath. So far it seems that FindNextUserKeyInternal only parses values as UserKeys, and iter->key() call generally returns user key. Can we add new API to DBIter as internal_key(), and modify this internal method to optionally set saved_key_ to point to the full internal key? I don't need to store actual seqnum there, but I do need to store type.
Closes https://github.com/facebook/rocksdb/pull/2999
Differential Revision: D6175602
Pulled By: mikhail-antonov
fbshipit-source-id: c779a6696ee2d574d86c69cec866a3ae095aa900
Summary:
Update Compaction/Flush to support WritePreparedTxnDB: Add SnapshotChecker which is a proxy to query WritePreparedTxnDB::IsInSnapshot. Pass SnapshotChecker to DBImpl on WritePreparedTxnDB open. CompactionIterator use it to check if a key has been committed and if it is visible to a snapshot. In CompactionIterator:
* check if key has been committed. If not, output uncommitted keys AS-IS.
* use SnapshotChecker to check if key is visible to a snapshot when in need.
* do not output key with seq = 0 if the key is not committed.
Closes https://github.com/facebook/rocksdb/pull/2926
Differential Revision: D5902907
Pulled By: yiwu-arbug
fbshipit-source-id: 945e037fdf0aa652dc5ba0ad879461040baa0320
Summary:
Added a function `MergeOperator::DoesAllowSingleMergeOperand()` to allow invoking a merge operator even with a single merge operand, if overriden.
This is needed for Cassandra-on-RocksDB work. All Cassandra writes are through merges and this will allow a single merge-value to be updated in the merge-operator invoked via a compaction, if needed, due to an expired TTL.
Closes https://github.com/facebook/rocksdb/pull/2721
Differential Revision: D5608706
Pulled By: sagar0
fbshipit-source-id: f299f9f91c4d1ac26e48bd5906e122c1c5e5f3fc
Summary:
This reverts the previous commit 1d7048c598, which broke the build.
Did a `git revert 1d7048c`.
Closes https://github.com/facebook/rocksdb/pull/2627
Differential Revision: D5476473
Pulled By: sagar0
fbshipit-source-id: 4756ff5c0dfc88c17eceb00e02c36176de728d06
Summary: This uses `clang-tidy` to comment out unused parameters (in functions, methods and lambdas) in fbcode. Cases that the tool failed to handle are fixed manually.
Reviewed By: igorsugak
Differential Revision: D5454343
fbshipit-source-id: 5dee339b4334e25e963891b519a5aa81fbf627b2
Summary:
First cut for early review; there are few conceptual points to answer and some code structure issues.
For conceptual points -
- restriction-wise, we're going to disallow ingest_behind if (use_seqno_zero_out=true || disable_auto_compaction=false), the user is responsible to properly open and close DB with required params
- we wanted to ingest into reserved bottom most level. Should we fail fast if bottom level isn't empty, or should we attempt to ingest if file fits there key-ranges-wise?
- Modifying AssignLevelForIngestedFile seems the place we we'd handle that.
On code structure - going to refactor GenerateAndAddExternalFile call in the test class to allow passing instance of IngestionOptions, that's just going to incur lots of changes at callsites.
Closes https://github.com/facebook/rocksdb/pull/2144
Differential Revision: D4873732
Pulled By: lightmark
fbshipit-source-id: 81cb698106b68ef8797f564453651d50900e153a
Summary:
…action
The two options, min_partial_merge_operands and verify_checksums_in_compaction, are not seldom used. Remove them to reduce the total number of options. Also remove them from Java and C interface.
Closes https://github.com/facebook/rocksdb/pull/1902
Differential Revision: D4601219
Pulled By: siying
fbshipit-source-id: aad4cb2
Summary:
introduce new methods into a public threadpool interface,
- allow submission of std::functions as they allow greater flexibility.
- add Joining methods to the implementation to join scheduled and submitted jobs with
an option to cancel jobs that did not start executing.
- Remove ugly `#ifdefs` between pthread and std implementation, make it uniform.
- introduce pimpl for a drop in replacement of the implementation
- Introduce rocksdb::port::Thread typedef which is a replacement for std::thread. On Posix Thread defaults as before std::thread.
- Implement WindowsThread that allocates memory in a more controllable manner than windows std::thread with a replaceable implementation.
- should be no functionality changes.
Closes https://github.com/facebook/rocksdb/pull/1823
Differential Revision: D4492902
Pulled By: siying
fbshipit-source-id: c74cb11
Summary:
DB shutdown aborts running compactions by setting an atomic shutting_down=true that CompactionJob periodically checks. Without this PR it checks it before processing every _output_ value. If compaction filter filters everything out, the compaction is uninterruptible. This PR adds checks for shutting_down on every _input_ value (in CompactionIterator and MergeHelper).
There's also some minor code cleanup along the way.
Closes https://github.com/facebook/rocksdb/pull/1639
Differential Revision: D4306571
Pulled By: yiwu-arbug
fbshipit-source-id: f050890
Summary:
Embarassingly enough, the first time I tried to use my new feature in logdevice it crashed with this assertion failure:
db/pinned_iterators_manager.h:30: void rocksdb::PinnedIteratorsManager::StartPinning(): Assertion `pinning_enabled == false' failed
The issue was that `pinned_iters_mgr_.StartPinning()` was called but `pinned_iters_mgr_.ReleasePinnedData()` wasn't.
Closes https://github.com/facebook/rocksdb/pull/1611
Differential Revision: D4265622
Pulled By: al13n321
fbshipit-source-id: 747b10f
Summary:
This adds the ability for compaction filter to say "drop this key-value, and also drop everything up to key x". This will cause the compaction to seek input iterator to x, without reading the data. This can make compaction much faster when large consecutive chunks of data are filtered out. See the changes in include/rocksdb/compaction_filter.h for the new API.
Along the way this diff also adds ability for compaction filter changing merge operands, similar to how it can change values; we're not going to use this feature, it just seemed easier and cleaner to implement it than to document that it's not implemented :)
The diff is not as big as it may seem, about half of the lines are a test.
Closes https://github.com/facebook/rocksdb/pull/1599
Differential Revision: D4252092
Pulled By: al13n321
fbshipit-source-id: 41e1e48
Summary:
This diff introduces RangeDelAggregator, which takes ownership of iterators
provided to it via AddTombstones(). The tombstones are organized in a two-level
map (snapshot stripe -> begin key -> tombstone). Tombstone creation avoids data
copy by holding Slices returned by the iterator, which remain valid thanks to pinning.
For compaction, we create a hierarchical range tombstone iterator with structure
matching the iterator over compaction input data. An aggregator based on that
iterator is used by CompactionIterator to determine which keys are covered by
range tombstones. In case of merge operand, the same aggregator is used by
MergeHelper. Upon finishing each file in the compaction, relevant range tombstones
are added to the output file's range tombstone metablock and file boundaries are
updated accordingly.
To check whether a key is covered by range tombstone, RangeDelAggregator::ShouldDelete()
considers tombstones in the key's snapshot stripe. When this function is used outside of
compaction, it also checks newer stripes, which can contain covering tombstones. Currently
the intra-stripe check involves a linear scan; however, in the future we plan to collapse ranges
within a stripe such that binary search can be used.
RangeDelAggregator::AddToBuilder() adds all range tombstones in the table's key-range
to a new table's range tombstone meta-block. Since range tombstones may fall in the gap
between files, we may need to extend some files' key-ranges. The strategy is (1) first file
extends as far left as possible and other files do not extend left, (2) all files extend right
until either the start of the next file or the end of the last range tombstone in the gap,
whichever comes first.
One other notable change is adding release/move semantics to ScopedArenaIterator
such that it can be used to transfer ownership of an arena-allocated iterator, similar to
how unique_ptr is used for malloc'd data.
Depends on D61473
Test Plan: compaction_iterator_test, mock_table, end-to-end tests in D63927
Reviewers: sdong, IslamAbdelRahman, wanning, yhchiang, lightmark
Reviewed By: lightmark
Subscribers: andrewkr, dhruba, leveldb
Differential Revision: https://reviews.facebook.net/D62205
Summary:
D51183 was reverted due to breaking the LITE build.
This diff is the same as D51183 but with a fix for the LITE BUILD(D51693)
Test Plan: run all unit tests
Reviewers: sdong
Reviewed By: sdong
Subscribers: dhruba, leveldb
Differential Revision: https://reviews.facebook.net/D51711
Summary:
D50475 enables using SST files for transaction write-conflict checking. In order for this to work, we need to make sure not to compact out SingleDeletes when there is an earlier transaction snapshot(D50295). If there is a long-held snapshot, this could reduce the benefit of the SingleDelete optimization.
This diff allows Transactions to mark snapshots as being used for write-conflict checking. Then, during compaction, we will be able to optimize SingleDeletes better in the future.
This diff adds a flag to SnapshotImpl which is used by Transactions. This diff also passes the earliest write-conflict snapshot's sequence number to CompactionIterator. This diff does not actually change Compaction (after this diff is pushed, D50295 will be able to use this information).
Test Plan: no behavior change, ran existing tests
Reviewers: rven, kradhakrishnan, yhchiang, IslamAbdelRahman, sdong
Reviewed By: sdong
Subscribers: dhruba, leveldb
Differential Revision: https://reviews.facebook.net/D51183
Summary:
Since Andres' internship is over, I took over https://reviews.facebook.net/D42555 and rebased and simplified it a bit.
The behavior in this diff is a bit simpler than in D42555:
* only merge operators are passed through FilterMergeValue(). If fitler function returns true, the merge operator is ignored
* compaction filter is *not* called on: 1) results of merge operations and 2) base values that are getting merged with merge operands (the second case was also true in previous diff)
Do we also need a compaction filter to get called on merge results?
Test Plan: make && make check
Reviewers: lovro, tnovak, rven, yhchiang, sdong
Reviewed By: sdong
Subscribers: noetzli, kolmike, leveldb, dhruba, sdong
Differential Revision: https://reviews.facebook.net/D47847
Summary:
This patch fixes#7460559. It introduces SingleDelete as a new database
operation. This operation can be used to delete keys that were never
overwritten (no put following another put of the same key). If an overwritten
key is single deleted the behavior is undefined. Single deletion of a
non-existent key has no effect but multiple consecutive single deletions are
not allowed (see limitations).
In contrast to the conventional Delete() operation, the deletion entry is
removed along with the value when the two are lined up in a compaction. Note:
The semantics are similar to @igor's prototype that allowed to have this
behavior on the granularity of a column family (
https://reviews.facebook.net/D42093 ). This new patch, however, is more
aggressive when it comes to removing tombstones: It removes the SingleDelete
together with the value whenever there is no snapshot between them while the
older patch only did this when the sequence number of the deletion was older
than the earliest snapshot.
Most of the complex additions are in the Compaction Iterator, all other changes
should be relatively straightforward. The patch also includes basic support for
single deletions in db_stress and db_bench.
Limitations:
- Not compatible with cuckoo hash tables
- Single deletions cannot be used in combination with merges and normal
deletions on the same key (other keys are not affected by this)
- Consecutive single deletions are currently not allowed (and older version of
this patch supported this so it could be resurrected if needed)
Test Plan: make all check
Reviewers: yhchiang, sdong, rven, anthony, yoshinorim, igor
Reviewed By: igor
Subscribers: maykov, dhruba, leveldb
Differential Revision: https://reviews.facebook.net/D43179
Michael Liu