Summary:
The fix in #4727 for double snapshot release was incomplete since it does not properly remove the duplicate entires in the snapshot list after finding that a snapshot is still valid. The patch does that and also improves the unit test to show the issue.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4734
Differential Revision: D13266260
Pulled By: maysamyabandeh
fbshipit-source-id: 351e2c40cca45a87b757774c11af74182314911e
Summary:
Currently the garbage collection of items in old_commit_map_ was done upon ::ReleaseSnapshot. The assumption behind this method was that the sequence number of snapshots are unique, which is incorrect. In the very rare cases that two consecutive snapshot have the same sequence number this could lead the release of the first snapshot affect the old_commit_map_ that is necessary to service the reads of the second snapshot. The bug would be triggered only if i) two snapshot have the same seq, ii) both of them are very old (older than the last ~4m transactions), and iii) there is commit entry overlapping with the snapshot seq number.
It is fixed by doing the cleanup of old_commit_map_ in UpdateSnapshot: the new list of snapshots are compared with the old one and the missing sequence numbers are concluded released. If two snapshots have the same seq number, after the release of one of them, the seq number still appears in the snapshot least and thus not cleaned up prematurely.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4727
Differential Revision: D13246495
Pulled By: maysamyabandeh
fbshipit-source-id: 93b87a5042afd8060889df245526d3f5d29de9fe
Summary:
Ran the following commands to recursively change all the files under RocksDB:
```
find . -type f -name "*.cc" -exec sed -i 's/ unique_ptr/ std::unique_ptr/g' {} +
find . -type f -name "*.cc" -exec sed -i 's/<unique_ptr/<std::unique_ptr/g' {} +
find . -type f -name "*.cc" -exec sed -i 's/ shared_ptr/ std::shared_ptr/g' {} +
find . -type f -name "*.cc" -exec sed -i 's/<shared_ptr/<std::shared_ptr/g' {} +
```
Running `make format` updated some formatting on the files touched.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4638
Differential Revision: D12934992
Pulled By: sagar0
fbshipit-source-id: 45a15d23c230cdd64c08f9c0243e5183934338a8
Summary:
When evicting an entry form the commit_cache, it is verified against the list of old snapshots to see if it overlaps with any. The list of old snapshots is split into two lists: an efficient concurrent cache and an slow vector protected by a lock. The patch fixes a bug that would stop the search in the cache if it finds any and yet would not include the larger snapshots in the slower list.
An extra info log entry is also removed. The condition to trigger that although very rare is still feasible and should not spam the LOG when that happens.
Fixes#4621
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4639
Differential Revision: D12934989
Pulled By: maysamyabandeh
fbshipit-source-id: 4e0fe8147ba292b554ae78e94c21c2ef31e03e2d
Summary:
As you know, almost all compilers support "pragma once" keyword instead of using include guards. To be keep consistency between header files, all header files are edited.
Besides this, try to fix some warnings about loss of data.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4339
Differential Revision: D9654990
Pulled By: ajkr
fbshipit-source-id: c2cf3d2d03a599847684bed81378c401920ca848
Summary:
This adds support for recovering WriteUnprepared transactions through the following changes:
- The information in `RecoveredTransaction` is extended so that it can reference multiple batches.
- `MarkBeginPrepare` is extended with a bool indicating whether it is an unprepared begin, and this is passed down to `InsertRecoveredTransaction` to indicate whether the current transaction is prepared or not.
- `WriteUnpreparedTxnDB::Initialize` is overridden so that it will rollback unprepared transactions from the recovered transactions. This can be done without updating the prepare heap/commit map, because this is before the DB has finished initializing, and after writing the rollback batch, those data structures should not contain information about the rolled back transaction anyway.
Commit/Rollback of live transactions is still unimplemented and will come later.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4078
Differential Revision: D8703382
Pulled By: lth
fbshipit-source-id: 7e0aada6c23bd39299f1f20d6c060492e0e6b60a
Summary:
This is implemented by extending ReadCallback with another function `MaxUnpreparedSequenceNumber` which returns the largest visible sequence number for the current transaction, if there is uncommitted data written to DB. Otherwise, it returns zero, indicating no uncommitted data.
There are the places where reads had to be modified.
- Get and Seek/Next was just updated to seek to max(snapshot_seq, MaxUnpreparedSequenceNumber()) instead, and iterate until a key was visible.
- Prev did not need need updates since it did not use the Seek to sequence number optimization. Assuming that locks were held when writing unprepared keys, and ValidateSnapshot runs, there should only be committed keys and unprepared keys of the current transaction, all of which are visible. Prev will simply iterate to get the last visible key.
- Reseeking to skip keys optimization was also disabled for write unprepared, since it's possible to hit the max_skip condition even while reseeking. There needs to be some way to resolve infinite looping in this case.
Closes https://github.com/facebook/rocksdb/pull/3955
Differential Revision: D8286688
Pulled By: lth
fbshipit-source-id: 25e42f47fdeb5f7accea0f4fd350ef35198caafe
Summary:
Rollback was disabled in stress test since there was a concurrency issue in WritePrepared rollback algorithm. The issue is fixed by caching the column family handles in WritePrepared to skip getting them from the db when needed for rollback.
Tested by running transaction stress test under tsan.
Closes https://github.com/facebook/rocksdb/pull/3785
Differential Revision: D7793727
Pulled By: maysamyabandeh
fbshipit-source-id: d81ab6fda0e53186ca69944cfe0712ce4869451e
Summary:
Currently WritePrepared rolls back a transaction with prepare sequence number prepare_seq by i) write a single rollback batch with rollback_seq, ii) add <rollback_seq, rollback_seq> to commit cache, iii) remove prepare_seq from PrepareHeap.
This is correct assuming that there is no snapshot taken when a transaction is rolled back. This is the case the way MySQL does rollback which is after recovery. Otherwise if max_evicted_seq advances the prepare_seq, the live snapshot might assume data as committed since it does not find them in CommitCache.
The change is to simply add <prepare_seq. rollback_seq> to commit cache before removing prepare_seq from PrepareHeap. In this way if max_evicted_seq advances prpeare_seq, the existing mechanism that we have to check evicted entries against live snapshots will make sure that the live snapshot will not see the data of rolled back transaction.
Closes https://github.com/facebook/rocksdb/pull/3745
Differential Revision: D7696193
Pulled By: maysamyabandeh
fbshipit-source-id: c9a2d46341ddc03554dded1303520a1cab74ef9c
Summary:
This PR comments out the rest of the unused arguments which allow us to turn on the -Wunused-parameter flag. This is the second part of a codemod relating to https://github.com/facebook/rocksdb/pull/3557.
Closes https://github.com/facebook/rocksdb/pull/3662
Differential Revision: D7426121
Pulled By: Dayvedde
fbshipit-source-id: 223994923b42bd4953eb016a0129e47560f7e352
Summary:
We introduced smallest_prep optimization in this commit b225de7e10, which enables storing the smallest uncommitted sequence number along with the snapshot. This enables the readers that read from the snapshot to skip further checks and safely assumed the data is committed if its sequence number is less than smallest uncommitted when the snapshot was taken. The problem was that smallest uncommitted and the snapshot must be taken atomically, and the lack of atomicity had led to readers using a smallest uncommitted after the snapshot was taken and hence mistakenly skipping some data.
This patch fixes the problem by i) separating the process of removing of prepare entries from the AddCommitted function, ii) removing the prepare entires AFTER the committed sequence number is published, iii) getting smallest uncommitted (from the prepare list) BEFORE taking a snapshot. This guarantees that the smallest uncommitted that is accompanied with a snapshot is less than or equal of such number if it was obtained atomically.
Tested by running MySQLStyleTransactionTest/MySQLStyleTransactionTest.TransactionStressTest that was failing sporadically.
Closes https://github.com/facebook/rocksdb/pull/3703
Differential Revision: D7581934
Pulled By: maysamyabandeh
fbshipit-source-id: dc9d6f4fb477eba75d4d5927326905b548a96a32
Summary:
Adding some stats that would be helpful to monitor if the DB has gone to unlikely stats that would hurt the performance. These are mostly when we end up needing to acquire a mutex.
Closes https://github.com/facebook/rocksdb/pull/3683
Differential Revision: D7529393
Pulled By: maysamyabandeh
fbshipit-source-id: f7d36279a8f39bd84d8ddbf64b5c97f670c5d6d9
Summary:
The is an optimization to reduce lookup in the CommitCache when querying IsInSnapshot. The optimization takes the smallest uncommitted data at the time that the snapshot was taken and if the sequence number of the read data is lower than that number it assumes the data as committed.
To implement this optimization two changes are required: i) The AddPrepared function must be called sequentially to avoid out of order insertion in the PrepareHeap (otherwise the top of the heap does not indicate the smallest prepare in future too), ii) non-2PC transactions also call AddPrepared if they do not commit in one step.
Closes https://github.com/facebook/rocksdb/pull/3649
Differential Revision: D7388630
Pulled By: maysamyabandeh
fbshipit-source-id: b79506238c17467d590763582960d4d90181c600
Summary:
Currently if the CommitTimeWriteBatch is set to be used only as a state that is required only for recovery , the user cannot see that in DB until it is restarted. This while the state is already inserted into the DB after the memtable flush. It would be useful for debugging if make this state visible to the user after the flush by committing it. The patch does it by a invoking a callback that does the commit on the recoverable state.
Closes https://github.com/facebook/rocksdb/pull/3661
Differential Revision: D7424577
Pulled By: maysamyabandeh
fbshipit-source-id: 137f9408662f0853938b33fa440f27f04c1bbf5c
Summary:
Currently AddPrepared is performed only on the first sub-batch if there are duplicate keys in the write batch. This could cause a problem if the transaction takes too long to commit and the seq number of the first sub-patch moved to old_prepared_ but not the seq of the later ones. The patch fixes this by calling AddPrepared for all sub-patches.
Closes https://github.com/facebook/rocksdb/pull/3651
Differential Revision: D7388635
Pulled By: maysamyabandeh
fbshipit-source-id: 0ccd80c150d9bc42fe955e49ddb9d7ca353067b4
Summary:
Fix the following bugs:
- During recovery a duplicate key was inserted twice into the write batch of the recovery transaction,
once when the memtable returns false (because it was duplicates) and once for the 2nd attempt. This would result into different SubBatch count measured when the recovered transactions is committing.
- If a cf is flushed during recovery the memtable is not available to assist in detecting the duplicate key. This could result into not advancing the sequence number when iterating over duplicate keys of a flushed cf and hence inserting the next key with the wrong sequence number.
- SubBacthCounter would reset the comparator to default comparator after the first duplicate key. The 2nd duplicate key hence would have gone through a wrong comparator and not being detected.
Closes https://github.com/facebook/rocksdb/pull/3562
Differential Revision: D7149440
Pulled By: maysamyabandeh
fbshipit-source-id: 91ec317b165f363f5d11ff8b8c47c81cebb8ed77
Summary:
Under a certain sequence of accessing PreparedHeap, there was a bug that would not successfully empty the heap. This would result in performance issues when the heap content is moved to old_prepared_ after max_evicted_seq_ advances the orphan prepared sequence numbers. The patch fixed the bug and add more unit tests. It also does more logging when the unlikely scenarios are faced
Closes https://github.com/facebook/rocksdb/pull/3526
Differential Revision: D7038486
Pulled By: maysamyabandeh
fbshipit-source-id: f1e40bea558f67b03d2a29131fcb8734c65fce97
Summary:
These are optimization that we applied to improve sysbech's update_noindex performance.
1. Make use of LIKELY compiler hint
2. Move std::atomic so the subclass
3. Make use of skip_prepared in non-2pc transactions.
Closes https://github.com/facebook/rocksdb/pull/3512
Differential Revision: D7000075
Pulled By: maysamyabandeh
fbshipit-source-id: 1ab8292584df1f6305a4992973fb1b7933632181
Summary:
TransactionDB::Write can receive some optimization hints from the user. One is to skip the concurrency control mechanism. WritePreparedTxnDB is currently ignoring such hints. This patch optimizes WritePreparedTxnDB::Write for skip_concurrency_control and skip_duplicate_key_check hints.
Closes https://github.com/facebook/rocksdb/pull/3496
Differential Revision: D6971784
Pulled By: maysamyabandeh
fbshipit-source-id: cbab10ad538fa2b8bcb47e37c77724afe6e30f03
Summary:
This patch takes advantage of memtable being able to detect duplicate <key,seq> and returning TryAgain to handle duplicate keys in WritePrepared Txns. Through WriteBatchWithIndex's index it detects existence of at least a duplicate key in the write batch. If duplicate key was reported, it then pays the cost of counting the number of sub-patches by iterating over the write batch and pass it to DBImpl::Write. DB will make use of the provided batch_count to assign proper sequence numbers before sending them to the WAL. When later inserting the batch to the memtable, it increases the seq each time memtbale reports a duplicate (a sub-patch in our counting) and tries again.
Closes https://github.com/facebook/rocksdb/pull/3455
Differential Revision: D6873699
Pulled By: maysamyabandeh
fbshipit-source-id: db8487526c3a5dc1ddda0ea49f0f979b26ae648d
Summary:
This patch addresses a couple of minor TODOs for WritePrepared Txn such as double checking some assert statements at runtime as well, skip extra AddPrepared in non-2pc transactions, and safety check for infinite loops.
Closes https://github.com/facebook/rocksdb/pull/3302
Differential Revision: D6617002
Pulled By: maysamyabandeh
fbshipit-source-id: ef6673c139cb49f64c0879508d2f573b78609aca
Summary:
A proper implementation of Iterator::Refresh() for WritePreparedTxnDB would require release and acquire another snapshot. Since MyRocks don't make use of Iterator::Refresh(), we just simply mark it as not supported.
Closes https://github.com/facebook/rocksdb/pull/3290
Differential Revision: D6599931
Pulled By: yiwu-arbug
fbshipit-source-id: 4e1632d967316431424f6e458254ecf9a97567cf
Summary:
Add PreReleaseCallback to be called at the end of WriteImpl but before publishing the sequence number. The callback is used in WritePrepareTxn to i) update the commit map, ii) update the last published sequence number in the 2nd write queue. It also ensures that all the commits will go to the 2nd queue.
These changes will ensure that the commit map is updated before the sequence number is published and used by reading snapshots. If we use two write queues, the snapshots will use the seq number published by the 2nd queue. If we use one write queue (the default, the snapshots will use the last seq number in the memtable, which also indicates the last published seq number.
Closes https://github.com/facebook/rocksdb/pull/3205
Differential Revision: D6438959
Pulled By: maysamyabandeh
fbshipit-source-id: f8b6c434e94bc5f5ab9cb696879d4c23e2577ab9
Summary:
This patch implements MultiGet API for WritePreparedTxnDB and update the existing unit tests.
Closes https://github.com/facebook/rocksdb/pull/3196
Differential Revision: D6401493
Pulled By: maysamyabandeh
fbshipit-source-id: 51501a1e32645fc2da8680e77a50035f6530f2cc
Summary:
The sequence number was not properly advanced after a rollback marker. The patch extends the existing unit tests to detect the bug and also fixes it.
Closes https://github.com/facebook/rocksdb/pull/3157
Differential Revision: D6304291
Pulled By: maysamyabandeh
fbshipit-source-id: 1b519c44a5371b802da49c9e32bd00087a8da401
Summary:
This patch clarifies and refactors the logic around tracked keys in transactions.
Closes https://github.com/facebook/rocksdb/pull/3140
Differential Revision: D6290258
Pulled By: maysamyabandeh
fbshipit-source-id: 03b50646264cbcc550813c060b180fc7451a55c1
Summary:
Move WritePreparedTxnDB from pessimistic_transaction_db.h to its own header, write_prepared_txn_db.h
Closes https://github.com/facebook/rocksdb/pull/3114
Differential Revision: D6220987
Pulled By: maysamyabandeh
fbshipit-source-id: 18893fb4fdc6b809fe117dabb544080f9b4a301b
Summary:
Enable concurrent_prepare flag for WritePrepared transactions and extend the existing transaction tests with this config.
Closes https://github.com/facebook/rocksdb/pull/3046
Differential Revision: D6106534
Pulled By: maysamyabandeh
fbshipit-source-id: 88c8d21d45bc492beb0a131caea84a2ac5e7d38c
Summary:
On iterator create, take a snapshot, create a ReadCallback and pass the ReadCallback to the underlying DBIter to check if key is committed.
Closes https://github.com/facebook/rocksdb/pull/2981
Differential Revision: D6001471
Pulled By: yiwu-arbug
fbshipit-source-id: 3565c4cdaf25370ba47008b0e0cb65b31dfe79fe
Summary:
On WritePreparedTxnDB destruct there could be running compaction/flush holding a SnapshotChecker, which holds a pointer back to WritePreparedTxnDB. Make sure those jobs finished before destructing WritePreparedTxnDB.
This is caught by TransactionTest::SeqAdvanceTest.
Closes https://github.com/facebook/rocksdb/pull/2982
Differential Revision: D6002957
Pulled By: yiwu-arbug
fbshipit-source-id: f1e70390c9798d1bd7959f5c8e2a1c14100773c3
Summary:
Update Compaction/Flush to support WritePreparedTxnDB: Add SnapshotChecker which is a proxy to query WritePreparedTxnDB::IsInSnapshot. Pass SnapshotChecker to DBImpl on WritePreparedTxnDB open. CompactionIterator use it to check if a key has been committed and if it is visible to a snapshot. In CompactionIterator:
* check if key has been committed. If not, output uncommitted keys AS-IS.
* use SnapshotChecker to check if key is visible to a snapshot when in need.
* do not output key with seq = 0 if the key is not committed.
Closes https://github.com/facebook/rocksdb/pull/2926
Differential Revision: D5902907
Pulled By: yiwu-arbug
fbshipit-source-id: 945e037fdf0aa652dc5ba0ad879461040baa0320
Summary:
Compaction will output keys with sequence number 0, if it is visible to
earliest snapshot. Adding a test to make sure IsInSnapshot() report sequence number 0 is
visible to any snapshot.
Closes https://github.com/facebook/rocksdb/pull/2974
Differential Revision: D5990665
Pulled By: yiwu-arbug
fbshipit-source-id: ef50ebc777ff8ca688771f3ab598c7a609b0b65e
Summary:
With WriteCommitted, when the write batch has duplicate keys, the txn db simply inserts them to the db with different seq numbers and let the db ignore/merge the duplicate values at the read time. With WritePrepared all the entries of the batch are inserted with the same seq number which prevents us from benefiting from this simple solution.
This patch applies a hackish solution to unblock the end-to-end testing. The hack is to be replaced with a proper solution soon. The patch simply detects the duplicate key insertions, and mark the previous one as obsolete. Then before writing to the db it rewrites the batch eliminating the obsolete keys. This would incur a memcpy cost. Furthermore handing duplicate merge would require to do FullMerge instead of simply ignoring the previous value, which is not handled by this patch.
Closes https://github.com/facebook/rocksdb/pull/2969
Differential Revision: D5976337
Pulled By: maysamyabandeh
fbshipit-source-id: 114e65b66f137d8454ff2d1d782b8c05da95f989
Summary:
Implement the rollback of WritePrepared txns. For each modified value, it reads the value before the txn and write it back. This would cancel out the effect of transaction. It also remove the rolled back txn from prepared heap.
Closes https://github.com/facebook/rocksdb/pull/2946
Differential Revision: D5937575
Pulled By: maysamyabandeh
fbshipit-source-id: a6d3c47f44db3729f44b287a80f97d08dc4e888d
Summary:
Recover txns from the WAL. Also added some unit tests.
Closes https://github.com/facebook/rocksdb/pull/2901
Differential Revision: D5859596
Pulled By: maysamyabandeh
fbshipit-source-id: 6424967b231388093b4effffe0a3b1b7ec8caeb0
Summary:
Looks like the API is simply missing. Adding it.
Closes https://github.com/facebook/rocksdb/pull/2937
Differential Revision: D5919955
Pulled By: yiwu-arbug
fbshipit-source-id: 6e2e9c96c29882b0bb4113d1f8efb72bffc57878
Summary:
By default the seq number in DB is increased once per written key. WritePrepared txns requires the seq to be increased once per the entire batch so that the seq would be used as the prepare timestamp by which the transaction is identified. Also we need to increase seq for the commit marker since it would give a unique id to the commit timestamp of transactions.
Two unit tests are added to verify our understanding of how the seq should be increased. The recovery path requires much more work and is left to another patch.
Closes https://github.com/facebook/rocksdb/pull/2885
Differential Revision: D5837843
Pulled By: maysamyabandeh
fbshipit-source-id: a08960b93d727e1cf438c254d0c2636fb133cc1c
Summary:
We had two proposals for lock-free commit maps. This patch implements the latter one that was simpler. We can later experiment with both proposals.
In this impl each entry is an std::atomic of uint64_t, which are accessed via memory_order_acquire/release. In x86_64 arch this is compiled to simple reads and writes from memory.
Closes https://github.com/facebook/rocksdb/pull/2861
Differential Revision: D5800724
Pulled By: maysamyabandeh
fbshipit-source-id: 41abae9a4a5df050a8eb696c43de11c2770afdda
Summary:
This patch advances the max_evicted_seq_ is larger granularities to reduce the overhead of updating the relevant data structures.
It also refactor the related code and adds testing to that. As part of this patch some of the TODOs for removing usage of non-static const members are also addressed.
Closes https://github.com/facebook/rocksdb/pull/2844
Differential Revision: D5772928
Pulled By: maysamyabandeh
fbshipit-source-id: f4fcc2948be69c034f10812cf922ce5ab82ef98c
Summary:
Divide the old snapshots to two lists: a few that fit into a cached array and the rest in a vector, which is expected to be empty in normal cases. The former is to optimize concurrent reads from snapshots without requiring locks. It is done by an array of std::atomic, from which std::memory_order_acquire reads are compiled to simple read instructions in most of the x86_64 architectures.
Closes https://github.com/facebook/rocksdb/pull/2758
Differential Revision: D5660504
Pulled By: maysamyabandeh
fbshipit-source-id: 524fcf9a8e7f90a92324536456912a99aaa6740c
Summary:
Changes:
* extended the wait_txn_map to track additional information
* designed circular buffer to store n latest deadlocks' information
* added test coverage to verify the additional information tracked is accurately stored in the buffer
Closes https://github.com/facebook/rocksdb/pull/2630
Differential Revision: D5478025
Pulled By: armishra
fbshipit-source-id: 2b138de7b5a73f5ca554fc3ff8220a3be49f39e7
Maysam Yabandeh