Summary:
Part of compaction cpu goes to processing snapshot list, the larger the list the bigger the overhead. Although the lifetime of most of the snapshots is much shorter than the lifetime of compactions, the compaction conservatively operates on the list of snapshots that it initially obtained. This patch allows the snapshot list to be updated via a callback if the compaction is taking long. This should let the compaction to continue more efficiently with much smaller snapshot list.
For simplicity, to avoid the feature is disabled in two cases: i) When more than one sub-compaction are sharing the same snapshot list, ii) when Range Delete is used in which the range delete aggregator has its own copy of snapshot list.
This fixes the reverted https://github.com/facebook/rocksdb/pull/5099 issue with range deletes.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/5278
Differential Revision: D15203291
Pulled By: maysamyabandeh
fbshipit-source-id: fa645611e606aa222c7ce53176dc5bb6f259c258
Summary:
Our daily stress tests are failing after this feature. Reverting temporarily until we figure the reason for test failures.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/5269
Differential Revision: D15151285
Pulled By: maysamyabandeh
fbshipit-source-id: e4002b99690a97df30d4b4b58bf0f61e9591bc6e
Summary:
The newly added test CompactionJobTest.SnapshotRefresh sets the snapshot refresh period to 0 to stress the feature. This results into large number of refresh events, which in turn results into an UBSAN failure when a bitwise shift operand goes beyond the uint64_t size.
The patch fixes that by simplifying the shift logic to be done only by 2 bits after each refresh. Furthermore it verifies that the shift operation does not result in decreasing the refresh period.
Testing:
COMPILE_WITH_UBSAN=1 make -j32 compaction_job_test
./compaction_job_test --gtest_filter=CompactionJobTest.SnapshotRefresh
Pull Request resolved: https://github.com/facebook/rocksdb/pull/5257
Differential Revision: D15106463
Pulled By: maysamyabandeh
fbshipit-source-id: f2718898ea7ba4fa9f7e87b70cf98fe647c0de80
Summary:
Part of compaction cpu goes to processing snapshot list, the larger the list the bigger the overhead. Although the lifetime of most of the snapshots is much shorter than the lifetime of compactions, the compaction conservatively operates on the list of snapshots that it initially obtained. This patch allows the snapshot list to be updated via a callback if the compaction is taking long. This should let the compaction to continue more efficiently with much smaller snapshot list.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/5099
Differential Revision: D15086710
Pulled By: maysamyabandeh
fbshipit-source-id: 7649f56c3b6b2fb334962048150142a3bf9c1a12
Summary:
We found that the behavior of CompactionFilter::IgnoreSnapshots() = false isn't
what we have expected. We thought that snapshot will always be preserved.
However, we just realized that, if no snapshot is created while compaction
starts, and a snapshot is created after that, the data seen from the snapshot
can successfully be dropped by the compaction. This creates a strange behavior
to the feature, which is hard to explain. Like what is documented in code
comment, this feature is not very useful with snapshot anyway. The decision
is to deprecate the feature.
We keep the function to avoid to break users code. However, we will fail
compactions if false is returned.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4954
Differential Revision: D13981900
Pulled By: siying
fbshipit-source-id: 2db8c2c3865acd86a28dca625945d1481b1d1e36
Summary:
Fix how CompactionIterator::findEarliestVisibleSnapshots handles released snapshot. It fixing the two scenarios:
Scenario 1:
key1 has two values v1 and v2. There're two snapshots s1 and s2 taken after v1 and v2 are committed. Right after compaction output v2, s1 is released. Now findEarliestVisibleSnapshot may see s1 being released, and return the next snapshot, which is s2. That's larger than v2's earliest visible snapshot, which was s1.
The fix: the only place we check against last snapshot and current key snapshot is when we decide whether to compact out a value if it is hidden by a later value. In the check if we see current snapshot is even larger than last snapshot, we know last snapshot is released, and we are safe to compact out current key.
Scenario 2:
key1 has two values v1 and v2. there are two snapshots s1 and s2 taken after v1 and v2 are committed. During compaction before we process the key, s1 is released. When compaction process v2, snapshot checker may return kSnapshotReleased, and the earliest visible snapshot for v2 become s2. When compaction process v1, snapshot checker may return kIsInSnapshot (for WritePrepared transaction, it could be because v1 is still in commit cache). The result will become inconsistent here.
The fix: remember the set of released snapshots ever reported by snapshot checker, and ignore them when finding result for findEarliestVisibleSnapshot.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4890
Differential Revision: D13705538
Pulled By: maysamyabandeh
fbshipit-source-id: e577f0d9ee1ff5a6035f26859e56902ecc85a5a4
Summary:
Compaction iterator keep a copy of list of live snapshots at the beginning of compaction, and then query snapshot checker to verify if values of a sequence number is visible to these snapshots. However when the snapshot is released in the middle of compaction, the snapshot checker implementation (i.e. WritePreparedSnapshotChecker) may remove info with the snapshot and may report incorrect result, which lead to values being compacted out when it shouldn't. This patch conservatively keep the values if snapshot checker determines that the snapshots is released.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4858
Differential Revision: D13617146
Pulled By: maysamyabandeh
fbshipit-source-id: cf18a94f6f61a94bcff73c280f117b224af5fbc3
Summary:
Now that v2 is fully functional, the v1 aggregator is removed.
The v2 aggregator has been renamed.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4778
Differential Revision: D13495930
Pulled By: abhimadan
fbshipit-source-id: 9d69500a60a283e79b6c4fa938fc68a8aa4d40d6
Summary:
RangeDelAggregatorV2 now supports ShouldDelete calls on
snapshot stripes and creation of range tombstone compaction iterators.
RangeDelAggregator is no longer used on any non-test code path, and will
be removed in a future commit.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4758
Differential Revision: D13439254
Pulled By: abhimadan
fbshipit-source-id: fe105bcf8e3d4a2df37a622d5510843cd71b0401
Summary:
For example calling CompactionFilter is always timed and gives the user no way to disable.
This PR will disable the timer if `Statistics::stats_level_` (which is part of DBOptions) is `kExceptDetailedTimers`
Closes https://github.com/facebook/rocksdb/pull/4029
Differential Revision: D8583670
Pulled By: miasantreble
fbshipit-source-id: 913be9fe433ae0c06e88193b59d41920a532307f
Summary:
Red diff to remove existing implementation of garbage collection. The current approach is reference counting kind of approach and require a lot of effort to get the size counter right on compaction and deletion. I'm going to go with a simple mark-sweep kind of approach and will send another PR for that.
CompactionEventListener was added solely for blob db and it adds complexity and overhead to compaction iterator. Removing it as well.
Closes https://github.com/facebook/rocksdb/pull/3551
Differential Revision: D7130190
Pulled By: yiwu-arbug
fbshipit-source-id: c3a375ad2639a3f6ed179df6eda602372cc5b8df
Summary:
The motivation for this PR is to add to RocksDB support for differential (incremental) snapshots, as snapshot of the DB changes between two points in time (one can think of it as diff between to sequence numbers, or the diff D which can be thought of as an SST file or just set of KVs that can be applied to sequence number S1 to get the database to the state at sequence number S2).
This feature would be useful for various distributed storages layers built on top of RocksDB, as it should help reduce resources (time and network bandwidth) needed to recover and rebuilt DB instances as replicas in the context of distributed storages.
From the API standpoint that would like client app requesting iterator between (start seqnum) and current DB state, and reading the "diff".
This is a very draft PR for initial review in the discussion on the approach, i'm going to rework some parts and keep updating the PR.
For now, what's done here according to initial discussions:
Preserving deletes:
- We want to be able to optionally preserve recent deletes for some defined period of time, so that if a delete came in recently and might need to be included in the next incremental snapshot it would't get dropped by a compaction. This is done by adding new param to Options (preserve deletes flag) and new variable to DB Impl where we keep track of the sequence number after which we don't want to drop tombstones, even if they are otherwise eligible for deletion.
- I also added a new API call for clients to be able to advance this cutoff seqnum after which we drop deletes; i assume it's more flexible to let clients control this, since otherwise we'd need to keep some kind of timestamp < -- > seqnum mapping inside the DB, which sounds messy and painful to support. Clients could make use of it by periodically calling GetLatestSequenceNumber(), noting the timestamp, doing some calculation and figuring out by how much we need to advance the cutoff seqnum.
- Compaction codepath in compaction_iterator.cc has been modified to avoid dropping tombstones with seqnum > cutoff seqnum.
Iterator changes:
- couple params added to ReadOptions, to optionally allow client to request internal keys instead of user keys (so that client can get the latest value of a key, be it delete marker or a put), as well as min timestamp and min seqnum.
TableCache changes:
- I modified table_cache code to be able to quickly exclude SST files from iterators heep if creation_time on the file is less then iter_start_ts as passed in ReadOptions. That would help a lot in some DB settings (like reading very recent data only or using FIFO compactions), but not so much for universal compaction with more or less long iterator time span.
What's left:
- Still looking at how to best plug that inside DBIter codepath. So far it seems that FindNextUserKeyInternal only parses values as UserKeys, and iter->key() call generally returns user key. Can we add new API to DBIter as internal_key(), and modify this internal method to optionally set saved_key_ to point to the full internal key? I don't need to store actual seqnum there, but I do need to store type.
Closes https://github.com/facebook/rocksdb/pull/2999
Differential Revision: D6175602
Pulled By: mikhail-antonov
fbshipit-source-id: c779a6696ee2d574d86c69cec866a3ae095aa900
Summary:
Update Compaction/Flush to support WritePreparedTxnDB: Add SnapshotChecker which is a proxy to query WritePreparedTxnDB::IsInSnapshot. Pass SnapshotChecker to DBImpl on WritePreparedTxnDB open. CompactionIterator use it to check if a key has been committed and if it is visible to a snapshot. In CompactionIterator:
* check if key has been committed. If not, output uncommitted keys AS-IS.
* use SnapshotChecker to check if key is visible to a snapshot when in need.
* do not output key with seq = 0 if the key is not committed.
Closes https://github.com/facebook/rocksdb/pull/2926
Differential Revision: D5902907
Pulled By: yiwu-arbug
fbshipit-source-id: 945e037fdf0aa652dc5ba0ad879461040baa0320
Summary:
This reverts the previous commit 1d7048c598, which broke the build.
Did a `git revert 1d7048c`.
Closes https://github.com/facebook/rocksdb/pull/2627
Differential Revision: D5476473
Pulled By: sagar0
fbshipit-source-id: 4756ff5c0dfc88c17eceb00e02c36176de728d06
Summary: This uses `clang-tidy` to comment out unused parameters (in functions, methods and lambdas) in fbcode. Cases that the tool failed to handle are fixed manually.
Reviewed By: igorsugak
Differential Revision: D5454343
fbshipit-source-id: 5dee339b4334e25e963891b519a5aa81fbf627b2
Summary:
First cut for early review; there are few conceptual points to answer and some code structure issues.
For conceptual points -
- restriction-wise, we're going to disallow ingest_behind if (use_seqno_zero_out=true || disable_auto_compaction=false), the user is responsible to properly open and close DB with required params
- we wanted to ingest into reserved bottom most level. Should we fail fast if bottom level isn't empty, or should we attempt to ingest if file fits there key-ranges-wise?
- Modifying AssignLevelForIngestedFile seems the place we we'd handle that.
On code structure - going to refactor GenerateAndAddExternalFile call in the test class to allow passing instance of IngestionOptions, that's just going to incur lots of changes at callsites.
Closes https://github.com/facebook/rocksdb/pull/2144
Differential Revision: D4873732
Pulled By: lightmark
fbshipit-source-id: 81cb698106b68ef8797f564453651d50900e153a
Summary:
DB shutdown aborts running compactions by setting an atomic shutting_down=true that CompactionJob periodically checks. Without this PR it checks it before processing every _output_ value. If compaction filter filters everything out, the compaction is uninterruptible. This PR adds checks for shutting_down on every _input_ value (in CompactionIterator and MergeHelper).
There's also some minor code cleanup along the way.
Closes https://github.com/facebook/rocksdb/pull/1639
Differential Revision: D4306571
Pulled By: yiwu-arbug
fbshipit-source-id: f050890
Summary:
This adds the ability for compaction filter to say "drop this key-value, and also drop everything up to key x". This will cause the compaction to seek input iterator to x, without reading the data. This can make compaction much faster when large consecutive chunks of data are filtered out. See the changes in include/rocksdb/compaction_filter.h for the new API.
Along the way this diff also adds ability for compaction filter changing merge operands, similar to how it can change values; we're not going to use this feature, it just seemed easier and cleaner to implement it than to document that it's not implemented :)
The diff is not as big as it may seem, about half of the lines are a test.
Closes https://github.com/facebook/rocksdb/pull/1599
Differential Revision: D4252092
Pulled By: al13n321
fbshipit-source-id: 41e1e48
Summary:
- "rocksdb.compaction.key.drop.range_del" - number of keys dropped during compaction due to a range tombstone covering them
- "rocksdb.compaction.range_del.drop.obsolete" - number of range tombstones dropped due to compaction to bottom level and no snapshot saving them
- s/CompactionIteratorStats/CompactionIterationStats/g since this class is no longer specific to CompactionIterator -- it's also updated for range tombstone iteration during compaction
- Move the above class into a separate .h file to avoid circular dependency.
Closes https://github.com/facebook/rocksdb/pull/1520
Differential Revision: D4187179
Pulled By: ajkr
fbshipit-source-id: 10c2103
Summary:
This diff introduces RangeDelAggregator, which takes ownership of iterators
provided to it via AddTombstones(). The tombstones are organized in a two-level
map (snapshot stripe -> begin key -> tombstone). Tombstone creation avoids data
copy by holding Slices returned by the iterator, which remain valid thanks to pinning.
For compaction, we create a hierarchical range tombstone iterator with structure
matching the iterator over compaction input data. An aggregator based on that
iterator is used by CompactionIterator to determine which keys are covered by
range tombstones. In case of merge operand, the same aggregator is used by
MergeHelper. Upon finishing each file in the compaction, relevant range tombstones
are added to the output file's range tombstone metablock and file boundaries are
updated accordingly.
To check whether a key is covered by range tombstone, RangeDelAggregator::ShouldDelete()
considers tombstones in the key's snapshot stripe. When this function is used outside of
compaction, it also checks newer stripes, which can contain covering tombstones. Currently
the intra-stripe check involves a linear scan; however, in the future we plan to collapse ranges
within a stripe such that binary search can be used.
RangeDelAggregator::AddToBuilder() adds all range tombstones in the table's key-range
to a new table's range tombstone meta-block. Since range tombstones may fall in the gap
between files, we may need to extend some files' key-ranges. The strategy is (1) first file
extends as far left as possible and other files do not extend left, (2) all files extend right
until either the start of the next file or the end of the last range tombstone in the gap,
whichever comes first.
One other notable change is adding release/move semantics to ScopedArenaIterator
such that it can be used to transfer ownership of an arena-allocated iterator, similar to
how unique_ptr is used for malloc'd data.
Depends on D61473
Test Plan: compaction_iterator_test, mock_table, end-to-end tests in D63927
Reviewers: sdong, IslamAbdelRahman, wanning, yhchiang, lightmark
Reviewed By: lightmark
Subscribers: andrewkr, dhruba, leveldb
Differential Revision: https://reviews.facebook.net/D62205
Summary:
Issue scenario:
(1) We have 3 files in L1 and we issue a compaction that will compact them into 1 file in L2
(2) While compaction (1) is running, we flush a file into L0 and trigger another compaction that decide to move this file to L1 and then move it again to L2 (this file don't overlap with any other files)
(3) compaction (1) finishes and install the file it generated in L2, but this file overlap with the file we generated in (2) so we break the LSM consistency
Looks like this issue can be triggered by using non-exclusive manual compaction or AddFile()
Test Plan: unit tests
Reviewers: sdong
Reviewed By: sdong
Subscribers: hermanlee4, jkedgar, andrewkr, dhruba, yoshinorim
Differential Revision: https://reviews.facebook.net/D64947
Summary:
Added 2 statistics in compaction job statistics, to
identify if single deletes are not meeting a matching key
(fallthrough) or single deletes are meeting a merge, delete or
another single delete (i.e. not the expected case of put).
Test Plan: Tested the statistics using write_stress and compaction_job_stats_test
Reviewers: sdong
Reviewed By: sdong
Subscribers: andrewkr, dhruba
Differential Revision: https://reviews.facebook.net/D61749
Summary:
When subcompaction is used, all subcompactions share the same Compaction
pointer in CompactionJob while each subcompaction all keeps their mutable
stats in SubcompactionState. However, there're still some mutable part
that is currently store in the shared Compaction pointer.
This patch makes two changes:
1. Make the shared Compaction pointer const so that it can never be modified
during the compaction.
2. Move necessary states from Compaction to SubcompactionState.
3. Make functions of Compaction const if the function does not modify
its internal state.
Test Plan: rocksdb and MyRocks test
Reviewers: sdong, kradhakrishnan, andrewkr, IslamAbdelRahman
Reviewed By: IslamAbdelRahman
Subscribers: andrewkr, dhruba, yoshinorim, gunnarku, leveldb
Differential Revision: https://reviews.facebook.net/D55923
Summary: For Transactions, we want to start using the SST files to do write conflict checking. To do this, we need to make sure that compaction never removes all writes if an earlier snapshot exists. So I had to change the way we process SingleDeletes to sometimes leave a SingleDelete behind when we encounter a Put followed by a SingleDelete. See the comments in this diff for a more detailed explanation.
Test Plan: added more unit tests
Reviewers: rven, igor, kradhakrishnan, IslamAbdelRahman, yhchiang, sdong
Reviewed By: sdong
Subscribers: dhruba, leveldb
Differential Revision: https://reviews.facebook.net/D50295
Summary:
D51183 was reverted due to breaking the LITE build.
This diff is the same as D51183 but with a fix for the LITE BUILD(D51693)
Test Plan: run all unit tests
Reviewers: sdong
Reviewed By: sdong
Subscribers: dhruba, leveldb
Differential Revision: https://reviews.facebook.net/D51711
Summary:
D50475 enables using SST files for transaction write-conflict checking. In order for this to work, we need to make sure not to compact out SingleDeletes when there is an earlier transaction snapshot(D50295). If there is a long-held snapshot, this could reduce the benefit of the SingleDelete optimization.
This diff allows Transactions to mark snapshots as being used for write-conflict checking. Then, during compaction, we will be able to optimize SingleDeletes better in the future.
This diff adds a flag to SnapshotImpl which is used by Transactions. This diff also passes the earliest write-conflict snapshot's sequence number to CompactionIterator. This diff does not actually change Compaction (after this diff is pushed, D50295 will be able to use this information).
Test Plan: no behavior change, ran existing tests
Reviewers: rven, kradhakrishnan, yhchiang, IslamAbdelRahman, sdong
Reviewed By: sdong
Subscribers: dhruba, leveldb
Differential Revision: https://reviews.facebook.net/D51183
Summary:
Provide an API for compaction filter to specify that it needs
to be applied even if there are snapshots.
Test Plan: DBTestCompactionFilter.CompactionFilterIgnoreSnapshot
Reviewers: yhchiang, IslamAbdelRahman, sdong, anthony
Reviewed By: anthony
Subscribers: yoshinorim, dhruba, leveldb
Differential Revision: https://reviews.facebook.net/D51087
Summary:
Separate a new class InternalIterator from class Iterator, when the look-up is done internally, which also means they operate on key with sequence ID and type.
This change will enable potential future optimizations but for now InternalIterator's functions are still the same as Iterator's.
At the same time, separate the cleanup function to a separate class and let both of InternalIterator and Iterator inherit from it.
Test Plan: Run all existing tests.
Reviewers: igor, yhchiang, anthony, kradhakrishnan, IslamAbdelRahman, rven
Reviewed By: rven
Subscribers: leveldb, dhruba
Differential Revision: https://reviews.facebook.net/D48549
Summary:
Since Andres' internship is over, I took over https://reviews.facebook.net/D42555 and rebased and simplified it a bit.
The behavior in this diff is a bit simpler than in D42555:
* only merge operators are passed through FilterMergeValue(). If fitler function returns true, the merge operator is ignored
* compaction filter is *not* called on: 1) results of merge operations and 2) base values that are getting merged with merge operands (the second case was also true in previous diff)
Do we also need a compaction filter to get called on merge results?
Test Plan: make && make check
Reviewers: lovro, tnovak, rven, yhchiang, sdong
Reviewed By: sdong
Subscribers: noetzli, kolmike, leveldb, dhruba, sdong
Differential Revision: https://reviews.facebook.net/D47847
Summary:
This patch fixes#7460559. It introduces SingleDelete as a new database
operation. This operation can be used to delete keys that were never
overwritten (no put following another put of the same key). If an overwritten
key is single deleted the behavior is undefined. Single deletion of a
non-existent key has no effect but multiple consecutive single deletions are
not allowed (see limitations).
In contrast to the conventional Delete() operation, the deletion entry is
removed along with the value when the two are lined up in a compaction. Note:
The semantics are similar to @igor's prototype that allowed to have this
behavior on the granularity of a column family (
https://reviews.facebook.net/D42093 ). This new patch, however, is more
aggressive when it comes to removing tombstones: It removes the SingleDelete
together with the value whenever there is no snapshot between them while the
older patch only did this when the sequence number of the deletion was older
than the earliest snapshot.
Most of the complex additions are in the Compaction Iterator, all other changes
should be relatively straightforward. The patch also includes basic support for
single deletions in db_stress and db_bench.
Limitations:
- Not compatible with cuckoo hash tables
- Single deletions cannot be used in combination with merges and normal
deletions on the same key (other keys are not affected by this)
- Consecutive single deletions are currently not allowed (and older version of
this patch supported this so it could be resurrected if needed)
Test Plan: make all check
Reviewers: yhchiang, sdong, rven, anthony, yoshinorim, igor
Reviewed By: igor
Subscribers: maykov, dhruba, leveldb
Differential Revision: https://reviews.facebook.net/D43179
Summary:
The current build is failing on some platforms due to an __unused__ attribute.
This patch prevents the problem by using a pattern similar to MergeHelper
(assert not on the variable but inside a condition that uses the variable). We
should have better error handling in both cases in the future.
Test Plan: make clean all check
Reviewers: rven, anthony, yhchiang, sdong, igor, aekmekji
Reviewed By: aekmekji
Subscribers: dhruba, leveldb
Differential Revision: https://reviews.facebook.net/D46623
Summary:
Builder and CompactionJob share a lot of fairly complex code. This patch
refactors this code into a separate class, the CompactionIterator. Because the
shared code is fairly complex, this patch hopefully improves maintainability.
While there are is a lot of potential for further improvements, the patch is
intentionally pretty close to the original structure because the change is
already complex enough.
Test Plan: make clean all check && ./db_stress
Reviewers: rven, anthony, yhchiang, sdong, igor
Reviewed By: igor
Subscribers: dhruba, leveldb
Differential Revision: https://reviews.facebook.net/D46197
Maysam Yabandeh