8 Commits (7a959388995f19607310ea6fd8efc5cace65c20a)

Author	SHA1	Message	Date
Hui Xiao	fc74abb436	Fix FIFO causing overlapping seqnos in L0 files due to overlapped seqnos between ingested files and memtable's (#10777) ... Summary: **Context:** Same as https://github.com/facebook/rocksdb/pull/5958#issue-511150930 but apply the fix to FIFO Compaction case Repro: ``` COERCE_CONTEXT_SWICH=1 make -j56 db_stress ./db_stress --acquire_snapshot_one_in=0 --adaptive_readahead=0 --allow_data_in_errors=True --async_io=1 --avoid_flush_during_recovery=0 --avoid_unnecessary_blocking_io=0 --backup_max_size=104857600 --backup_one_in=0 --batch_protection_bytes_per_key=0 --block_size=16384 --bloom_bits=18 --bottommost_compression_type=disable --bytes_per_sync=262144 --cache_index_and_filter_blocks=0 --cache_size=8388608 --cache_type=lru_cache --charge_compression_dictionary_building_buffer=0 --charge_file_metadata=1 --charge_filter_construction=1 --charge_table_reader=1 --checkpoint_one_in=0 --checksum_type=kCRC32c --clear_column_family_one_in=0 --column_families=1 --compact_files_one_in=0 --compact_range_one_in=1000 --compaction_pri=3 --open_files=-1 --compaction_style=2 --fifo_allow_compaction=1 --compaction_ttl=0 --compression_max_dict_buffer_bytes=8388607 --compression_max_dict_bytes=16384 --compression_parallel_threads=1 --compression_type=zlib --compression_use_zstd_dict_trainer=1 --compression_zstd_max_train_bytes=0 --continuous_verification_interval=0 --data_block_index_type=0 --db=/dev/shm/rocksdb_test0/rocksdb_crashtest_whitebox --db_write_buffer_size=8388608 --delpercent=4 --delrangepercent=1 --destroy_db_initially=1 --detect_filter_construct_corruption=0 --disable_wal=0 --enable_compaction_filter=0 --enable_pipelined_write=1 --fail_if_options_file_error=1 --file_checksum_impl=none --flush_one_in=1000 --format_version=5 --get_current_wal_file_one_in=0 --get_live_files_one_in=0 --get_property_one_in=0 --get_sorted_wal_files_one_in=0 --index_block_restart_interval=15 --index_type=3 --ingest_external_file_one_in=100 --initial_auto_readahead_size=0 --iterpercent=10 --key_len_percent_dist=1,30,69 --level_compaction_dynamic_level_bytes=True --log2_keys_per_lock=10 --long_running_snapshots=0 --mark_for_compaction_one_file_in=10 --max_auto_readahead_size=16384 --max_background_compactions=20 --max_bytes_for_level_base=10485760 --max_key=100000 --max_key_len=3 --max_manifest_file_size=1073741824 --max_write_batch_group_size_bytes=1048576 --max_write_buffer_number=3 --max_write_buffer_size_to_maintain=4194304 --memtable_prefix_bloom_size_ratio=0.5 --memtable_protection_bytes_per_key=1 --memtable_whole_key_filtering=1 --memtablerep=skip_list --mmap_read=1 --mock_direct_io=False --nooverwritepercent=1 --num_file_reads_for_auto_readahead=0 --num_levels=1 --open_metadata_write_fault_one_in=0 --open_read_fault_one_in=32 --open_write_fault_one_in=0 --ops_per_thread=200000 --optimize_filters_for_memory=0 --paranoid_file_checks=1 --partition_filters=0 --partition_pinning=1 --pause_background_one_in=0 --periodic_compaction_seconds=0 --prefix_size=8 --prefixpercent=5 --prepopulate_block_cache=0 --progress_reports=0 --read_fault_one_in=0 --readahead_size=16384 --readpercent=45 --recycle_log_file_num=1 --reopen=20 --ribbon_starting_level=999 --snapshot_hold_ops=1000 --sst_file_manager_bytes_per_sec=0 --sst_file_manager_bytes_per_truncate=0 --subcompactions=2 --sync=0 --sync_fault_injection=0 --target_file_size_base=524288 --target_file_size_multiplier=2 --test_batches_snapshots=0 --top_level_index_pinning=3 --unpartitioned_pinning=0 --use_direct_io_for_flush_and_compaction=0 --use_direct_reads=0 --use_full_merge_v1=1 --use_merge=0 --use_multiget=1 --user_timestamp_size=0 --value_size_mult=32 --verify_checksum=1 --verify_checksum_one_in=0 --verify_db_one_in=1000 --verify_sst_unique_id_in_manifest=1 --wal_bytes_per_sync=0 --wal_compression=zstd --write_buffer_size=524288 --write_dbid_to_manifest=0 --writepercent=35 put or merge error: Corruption: force_consistency_checks(DEBUG): VersionBuilder: L0 file https://github.com/facebook/rocksdb/issues/479 with seqno 23711 29070 vs. file https://github.com/facebook/rocksdb/issues/482 with seqno 27138 29049 ``` **Summary:** FIFO only does intra-L0 compaction in the following four cases. For other cases, FIFO drops data instead of compacting on data, which is irrelevant to the overlapping seqno issue we are solving. - [FIFOCompactionPicker::PickSizeCompaction](https://github.com/facebook/rocksdb/blob/7.6.fb/db/compaction/compaction_picker_fifo.cc#L155) when `total size < compaction_options_fifo.max_table_files_size` and `compaction_options_fifo.allow_compaction == true` - For this path, we simply reuse the fix in `FindIntraL0Compaction` https://github.com/facebook/rocksdb/pull/5958/files#diff-c261f77d6dd2134333c4a955c311cf4a196a08d3c2bb6ce24fd6801407877c89R56 - This path was not stress-tested at all. Therefore we covered `fifo.allow_compaction` in stress test to surface the overlapping seqno issue we are fixing here. - [FIFOCompactionPicker::PickCompactionToWarm](https://github.com/facebook/rocksdb/blob/7.6.fb/db/compaction/compaction_picker_fifo.cc#L313) when `compaction_options_fifo.age_for_warm > 0` - For this path, we simply replicate the idea in https://github.com/facebook/rocksdb/pull/5958#issue-511150930 and skip files of largest seqno greater than `earliest_mem_seqno` - This path was not stress-tested at all. However covering `age_for_warm` option worths a separate PR to deal with db stress compatibility. Therefore we manually tested this path for this PR - [FIFOCompactionPicker::CompactRange](https://github.com/facebook/rocksdb/blob/7.6.fb/db/compaction/compaction_picker_fifo.cc#L365) that ends up picking one of the above two compactions - [CompactionPicker::CompactFiles](https://github.com/facebook/rocksdb/blob/7.6.fb/db/compaction/compaction_picker.cc#L378) - Since `SanitizeCompactionInputFiles()` will be called [before](https://github.com/facebook/rocksdb/blob/7.6.fb/db/compaction/compaction_picker.h#L111-L113) `CompactionPicker::CompactFiles` , we simply replicate the idea in https://github.com/facebook/rocksdb/pull/5958#issue-511150930 in `SanitizeCompactionInputFiles()`. To simplify implementation, we return `Stats::Abort()` on encountering seqno-overlapped file when doing compaction to L0 instead of skipping the file and proceed with the compaction. Some additional clean-up included in this PR: - Renamed `earliest_memtable_seqno` to `earliest_mem_seqno` for consistent naming - Added comment about `earliest_memtable_seqno` in related APIs - Made parameter `earliest_memtable_seqno` constant and required Pull Request resolved: https://github.com/facebook/rocksdb/pull/10777 Test Plan: - make check - New unit test `TEST_P(DBCompactionTestFIFOCheckConsistencyWithParam, FlushAfterIntraL0CompactionWithIngestedFile)`corresponding to the above 4 cases, which will fail accordingly without the fix - Regular CI stress run on this PR + stress test with aggressive value https://github.com/facebook/rocksdb/pull/10761 and on FIFO compaction only Reviewed By: ajkr Differential Revision: D40090485 Pulled By: hx235 fbshipit-source-id: 52624186952ee7109117788741aeeac86b624a4f	2 years ago
slk	95305c44a1	Add OpenAndTrimHistory API to support trimming data with specified timestamp (#9410) ... Summary: As disscussed in (https://github.com/facebook/rocksdb/issues/9223), Here added a new API named DB::OpenAndTrimHistory, this API will open DB and trim data to the timestamp specofied by **trim_ts** (The data with newer timestamp than specified trim bound will be removed). This API should only be used at a timestamp-enabled db instance recovery. And this PR implemented a new iterator named HistoryTrimmingIterator to support trimming history with a new API named DB::OpenAndTrimHistory. HistoryTrimmingIterator wrapped around the underlying InternalITerator such that keys whose timestamps newer than **trim_ts** should not be returned to the compaction iterator while **trim_ts** is not null. Pull Request resolved: https://github.com/facebook/rocksdb/pull/9410 Reviewed By: ltamasi Differential Revision: D34410207 Pulled By: riversand963 fbshipit-source-id: e54049dc234eccd673244c566b15df58df5a6236	3 years ago
sdong	e7c24168d8	Move old files to warm tier in FIFO compactions (#8310) ... Summary: Some FIFO users want to keep the data for longer, but the old data is rarely accessed. This feature allows users to configure FIFO compaction so that data older than a threshold is moved to a warm storage tier. Pull Request resolved: https://github.com/facebook/rocksdb/pull/8310 Test Plan: Add several unit tests. Reviewed By: ajkr Differential Revision: D28493792 fbshipit-source-id: c14824ea634814dee5278b449ab5c98b6e0b5501	3 years ago
mrambacher	8948dc8524	Make ImmutableOptions struct that inherits from ImmutableCFOptions and ImmutableDBOptions (#8262) ... Summary: The ImmutableCFOptions contained a bunch of fields that belonged to the ImmutableDBOptions. This change cleans that up by introducing an ImmutableOptions struct. Following the pattern of Options struct, this class inherits from the DB and CFOption structs (of the Immutable form). Only one structural change (the ImmutableCFOptions::fs was changed to a shared_ptr from a raw one) is in this PR. All of the other changes involve moving the member variables from the ImmutableCFOptions into the ImmutableOptions and changing member variables or function parameters as required for compilation purposes. Follow-on PRs may do a further clean-up of the code, such as renaming variables (such as "ImmutableOptions cf_options") and potentially eliminating un-needed function parameters (there is no longer a need to pass both an ImmutableDBOptions and an ImmutableOptions to a function). Pull Request resolved: https://github.com/facebook/rocksdb/pull/8262 Reviewed By: pdillinger Differential Revision: D28226540 Pulled By: mrambacher fbshipit-source-id: 18ae71eadc879dedbe38b1eb8e6f9ff5c7147dbf	4 years ago
Jay Zhuang	b0c5ecd6b3	Make max_subcompactions dynamically changeable (#7159) ... Summary: Make `max-subcompactions` dynamically changeable by passing the `DBOption` to Compaction. Pull Request resolved: https://github.com/facebook/rocksdb/pull/7159 Reviewed By: siying Differential Revision: D22671238 Pulled By: jay-zhuang fbshipit-source-id: 311ca9f6bb606965544d8708616d358cfed5be42	4 years ago
sdong	fdf882ded2	Replace namespace name "rocksdb" with ROCKSDB_NAMESPACE (#6433) ... Summary: When dynamically linking two binaries together, different builds of RocksDB from two sources might cause errors. To provide a tool for user to solve the problem, the RocksDB namespace is changed to a flag which can be overridden in build time. Pull Request resolved: https://github.com/facebook/rocksdb/pull/6433 Test Plan: Build release, all and jtest. Try to build with ROCKSDB_NAMESPACE with another flag. Differential Revision: D19977691 fbshipit-source-id: aa7f2d0972e1c31d75339ac48478f34f6cfcfb3e	5 years ago
Little-Wallace	ec3e3c3e02	Fix corruption with intra-L0 on ingested files (#5958) ... Summary: ## Problem Description Our process was abort when it call `CheckConsistency`. And the information in `stderr` show that "`L0 files seqno 3001491972 3004797440 vs. 3002875611 3004524421` ". Here are the causes of the accident I investigated. * RocksDB will call `CheckConsistency` whenever `MANIFEST` file is update. It will check sequence number interval of every file, except files which were ingested. * When one file is ingested into RocksDB, it will be assigned the value of global sequence number, and the minimum and maximum seqno of this file are equal, which are both equal to global sequence number. * `CheckConsistency` determines whether the file is ingested by whether the smallest and largest seqno of an sstable file are equal. * If IntraL0Compaction picks one sst which was ingested just now and compacted it into another sst, the `smallest_seqno` of this new file will be smaller than his `largest_seqno`. * If more than one ingested file was ingested before memtable schedule flush, and they all compact into one new sstable file by `IntraL0Compaction`. The sequence interval of this new file will be included in the interval of the memtable. So `CheckConsistency` will return a `Corruption`. * If a sstable was ingested after the memtable was schedule to flush, which would assign a larger seqno to it than memtable. Then the file was compacted with other files (these files were all flushed before the memtable) in L0 into one file. This compaction start before the flush job of memtable start, but completed after the flush job finish. So this new file produced by the compaction (we call it s1) would have a larger interval of sequence number than the file produced by flush (we call it s2). **But there was still some data in s1 written into RocksDB before the s2, so it's possible that some data in s2 was cover by old data in s1.** Of course, it would also make a `Corruption` because of overlap of seqno. There is the relationship of the files: > s1.smallest_seqno < s2.smallest_seqno < s2.largest_seqno < s1.largest_seqno So I skip pick sst file which was ingested in function `FindIntraL0Compaction ` ## Reason Here is my bug report: https://github.com/facebook/rocksdb/issues/5913 There are two situations that can cause the check to fail. ### First situation： - First we ingest five external sst into Rocksdb, and they happened to be ingested in L0. and there had been some data in memtable, which make the smallest sequence number of memtable is less than which of sst that we ingest. - If there had been one compaction job which compacted sst from L0 to L1, `LevelCompactionPicker` would trigger a `IntraL0Compaction` which would compact this five sst from L0 to L0. We call this sst A, which was merged from five ingested sst. - Then some data was put into memtable, and memtable was flushed to L0. We called this sst B. - RocksDB check consistency , and find the `smallest_seqno` of B is less than that of A and crash. Because A was merged from five sst, the smallest sequence number of it was less than the biggest sequece number of itself, so RocksDB could not tell if A was produce by ingested. ### Secondary situaion - First we have flushed many sst in L0, we call them [s1, s2, s3]. - There is an immutable memtable request to be flushed, but because flush thread is busy, so it has not been picked. we call it m1. And at the moment, one sst is ingested into L0. We call it s4. Because s4 is ingested after m1 became immutable memtable, so it has a larger log sequence number than m1. - m1 is flushed in L0. because it is small, this flush job finish quickly. we call it s5. - [s1, s2, s3, s4] are compacted into one sst to L0, by IntraL0Compaction. We call it s6. - compacted 4@0 files to L0 - When s6 is added into manifest, the corruption happened. because the largest sequence number of s6 is equal to s4, and they are both larger than that of s5. But because s1 is older than m1, so the smallest sequence number of s6 is smaller than that of s5. - s6.smallest_seqno < s5.smallest_seqno < s5.largest_seqno < s6.largest_seqno Pull Request resolved: https://github.com/facebook/rocksdb/pull/5958 Differential Revision: D18601316 fbshipit-source-id: 5fe54b3c9af52a2e1400728f565e895cde1c7267	5 years ago
Vijay Nadimpalli	49c5a12dbe	Organizing rocksdb/db directory ... Summary: Pull Request resolved: https://github.com/facebook/rocksdb/pull/5390 Differential Revision: D15579388 Pulled By: vjnadimpalli fbshipit-source-id: 5bfc95e31554b8ff05b97b76d6534113f527f366	6 years ago
Zhongyi Xie	baa5302447	Avoid double-compacting data in bottom level in manual compactions (#5138) ... Summary: Depending on the config, manual compaction (leveled compaction style) does following compactions: L0->L1 L1->L2 ... Ln-1 -> Ln Ln -> Ln The final Ln -> Ln compaction is partly unnecessary as it recompacts all the files that were just generated by the Ln-1 -> Ln. We should avoid recompacting such files. This rule should be applied to Lmax only. Resolves issue https://github.com/facebook/rocksdb/issues/4995 Pull Request resolved: https://github.com/facebook/rocksdb/pull/5138 Differential Revision: D14940106 Pulled By: miasantreble fbshipit-source-id: 8d3cf5507a17e76f3333cfd4bac5256d005636e5	6 years ago
Sagar Vemuri	70645355ad	Move FIFOCompactionPicker to a separate file (#4724) ... Summary: **Summary:** Simplified the code layout by moving FIFOCompactionPicker to a separate file. **Why?:** While trying to add ttl functionality to universal compaction, I found that `FIFOCompactionPicker` class and its impl methods to be interspersed between `LevelCompactionPicker` methods which kind-of made the code a little hard to traverse. So I moved `FIFOCompactionPicker` to a separate compaction_picker_fifo.h/cc file, similar to `UniversalCompactionPicker`. Pull Request resolved: https://github.com/facebook/rocksdb/pull/4724 Differential Revision: D13227914 Pulled By: sagar0 fbshipit-source-id: 89471766ea67fa4d87664a41c057dd7df4b3d4e3	6 years ago