Summary:
A second attempt after https://github.com/facebook/rocksdb/issues/10802, with bug fixes and refactoring. This PR updates compaction logic to take range tombstones into account when determining whether to cut the current compaction output file (https://github.com/facebook/rocksdb/issues/4811). Before this change, only point keys were considered, and range tombstones could cause large compactions. For example, if the current compaction outputs is a range tombstone [a, b) and 2 point keys y, z, they would be added to the same file, and may overlap with too many files in the next level and cause a large compaction in the future. This PR also includes ajkr's effort to simplify the logic to add range tombstones to compaction output files in `AddRangeDels()` ([https://github.com/facebook/rocksdb/issues/11078](https://github.com/facebook/rocksdb/pull/11078#issuecomment-1386078861)).
The main change is for `CompactionIterator` to emit range tombstone start keys to be processed by `CompactionOutputs`. A new class `CompactionMergingIterator` is introduced to replace `MergingIterator` under `CompactionIterator` to enable emitting of range tombstone start keys. Further improvement after this PR include cutting compaction output at some grandparent boundary key (instead of the next output key) when cutting within a range tombstone to reduce overlap with grandparents.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/11113
Test Plan:
* added unit test in db_range_del_test
* crash test with a small key range: `python3 tools/db_crashtest.py blackbox --simple --max_key=100 --interval=600 --write_buffer_size=262144 --target_file_size_base=256 --max_bytes_for_level_base=262144 --block_size=128 --value_size_mult=33 --subcompactions=10 --use_multiget=1 --delpercent=3 --delrangepercent=2 --verify_iterator_with_expected_state_one_in=2 --num_iterations=10`
Reviewed By: ajkr
Differential Revision: D42655709
Pulled By: cbi42
fbshipit-source-id: 8367e36ef5640e8f21c14a3855d4a8d6e360a34c
Summary:
This reverts commit f02c708aa3 since it introduced several bugs (see https://github.com/facebook/rocksdb/issues/11078 and https://github.com/facebook/rocksdb/issues/11067 for attempts to fix them) and that I do not have a high confidence to fix all of them and ensure no further ones before the next release branch cut. There are also come existing issue found during bug fixing. We will work on it and try to merge it to the release after.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/11089
Test Plan: existing CI.
Reviewed By: ajkr
Differential Revision: D42505972
Pulled By: cbi42
fbshipit-source-id: 2f66dcde6b85dc94977b317c2ce513872cfbc153
Summary:
This PR is the first step for Issue https://github.com/facebook/rocksdb/issues/4811. Currently compaction output files are cut at point keys, and the decision is made mainly in `CompactionOutputs::ShouldStopBefore()`. This makes it possible for range tombstones to cause large compactions that does not respect `max_compaction_bytes`. For example, we can have a large range tombstone that overlaps with too many files from the next level. Another example is when there is a gap between a range tombstone and another key. The first issue may be more acceptable, as a lot of data is deleted. This PR address the second issue by calling `ShouldStopBefore()` for range tombstone start keys. The main change is for `CompactionIterator` to emit range tombstone start keys to be processed by `CompactionOutputs`. A new `CompactionMergingIterator` is introduced and only used under `CompactionIterator` for this purpose. Further improvement after this PR include 1) cut compaction output at some grandparent boundary key instead of at the next point key or range tombstone start key and 2) cut compaction output file within a large range tombstone (it may be easier and reasonable to only do it for range tombstones at the end of a compaction output).
Pull Request resolved: https://github.com/facebook/rocksdb/pull/10802
Test Plan:
- added unit tests in db_range_del_test.
- stress test: `python3 tools/db_crashtest.py whitebox --[simple|enable_ts] --verify_iterator_with_expected_state_one_in=5 --delrangepercent=5 --prefixpercent=2 --writepercent=58 --readpercen=21 --duration=36000 --range_deletion_width=1000000`
Reviewed By: ajkr, jay-zhuang
Differential Revision: D40308827
Pulled By: cbi42
fbshipit-source-id: a8fd6f70a3f09d0ef7a40e006f6c964bba8c00df
Summary:
Currently, `iterate_upper_bound` is not checked for range tombstone keys in MergingIterator. This may impact performance when there is a large number of range tombstones right after `iterate_upper_bound`. This PR fixes this issue by checking `iterate_upper_bound` in MergingIterator for range tombstone keys.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/10966
Test Plan:
- added unit test
- stress test: `python3 tools/db_crashtest.py whitebox --simple --verify_iterator_with_expected_state_one_in=5 --delrangepercent=5 --prefixpercent=18 --writepercent=48 --readpercen=15 --duration=36000 --range_deletion_width=100`
- ran different stress tests over sandcastle
- Falcon team ran some test traffic and saw reduced CPU usage on processing range tombstones.
Reviewed By: ajkr
Differential Revision: D41414172
Pulled By: cbi42
fbshipit-source-id: 9b2c29eb3abb99327c6a649bdc412e70d863f981
Summary:
when there is a single memtable without range tombstones and no SST files in the database, DBIter should wrap memtable iterator directly. Currently we create a merging iterator on top of the memtable iterator, and have DBIter wrap around it. This causes iterator regression and this PR fixes this issue.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/10705
Test Plan:
- `make check`
- Performance:
- Set up: `./db_bench -benchmarks=filluniquerandom -write_buffer_size=$((1 << 30)) -num=10000`
- Benchmark: `./db_bench -benchmarks=seekrandom -use_existing_db=true -avoid_flush_during_recovery=true -write_buffer_size=$((1 << 30)) -num=10000 -threads=16 -duration=60 -seek_nexts=$seek_nexts`
```
seek_nexts main op/sec https://github.com/facebook/rocksdb/issues/10705 RocksDB v7.6
0 5746568 5749033 5786180
30 2411690 3006466 2837699
1000 102556 128902 124667
```
Reviewed By: ajkr
Differential Revision: D39644221
Pulled By: cbi42
fbshipit-source-id: 8063ff611ba31b0e5670041da3927c8c54b2097d
Summary:
Delete range logic is moved from `DBIter` to `MergingIterator`, and `MergingIterator` will seek to the end of a range deletion if possible instead of scanning through each key and check with `RangeDelAggregator`.
With the invariant that a key in level L (consider memtable as the first level, each immutable and L0 as a separate level) has a larger sequence number than all keys in any level >L, a range tombstone `[start, end)` from level L covers all keys in its range in any level >L. This property motivates optimizations in iterator:
- in `Seek(target)`, if level L has a range tombstone `[start, end)` that covers `target.UserKey`, then for all levels > L, we can do Seek() on `end` instead of `target` to skip some range tombstone covered keys.
- in `Next()/Prev()`, if the current key is covered by a range tombstone `[start, end)` from level L, we can do `Seek` to `end` for all levels > L.
This PR implements the above optimizations in `MergingIterator`. As all range tombstone covered keys are now skipped in `MergingIterator`, the range tombstone logic is removed from `DBIter`. The idea in this PR is similar to https://github.com/facebook/rocksdb/issues/7317, but this PR leaves `InternalIterator` interface mostly unchanged. **Credit**: the cascading seek optimization and the sentinel key (discussed below) are inspired by [Pebble](https://github.com/cockroachdb/pebble/blob/master/merging_iter.go) and suggested by ajkr in https://github.com/facebook/rocksdb/issues/7317. The two optimizations are mostly implemented in `SeekImpl()/SeekForPrevImpl()` and `IsNextDeleted()/IsPrevDeleted()` in `merging_iterator.cc`. See comments for each method for more detail.
One notable change is that the minHeap/maxHeap used by `MergingIterator` now contains range tombstone end keys besides point key iterators. This helps to reduce the number of key comparisons. For example, for a range tombstone `[start, end)`, a `start` and an `end` `HeapItem` are inserted into the heap. When a `HeapItem` for range tombstone start key is popped from the minHeap, we know this range tombstone becomes "active" in the sense that, before the range tombstone's end key is popped from the minHeap, all the keys popped from this heap is covered by the range tombstone's internal key range `[start, end)`.
Another major change, *delete range sentinel key*, is made to `LevelIterator`. Before this PR, when all point keys in an SST file are iterated through in `MergingIterator`, a level iterator would advance to the next SST file in its level. In the case when an SST file has a range tombstone that covers keys beyond the SST file's last point key, advancing to the next SST file would lose this range tombstone. Consequently, `MergingIterator` could return keys that should have been deleted by some range tombstone. We prevent this by pretending that file boundaries in each SST file are sentinel keys. A `LevelIterator` now only advance the file iterator once the sentinel key is processed.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/10449
Test Plan:
- Added many unit tests in db_range_del_test
- Stress test: `./db_stress --readpercent=5 --prefixpercent=19 --writepercent=20 -delpercent=10 --iterpercent=44 --delrangepercent=2`
- Additional iterator stress test is added to verify against iterators against expected state: https://github.com/facebook/rocksdb/issues/10538. This is based on ajkr's previous attempt https://github.com/facebook/rocksdb/pull/5506#issuecomment-506021913.
```
python3 ./tools/db_crashtest.py blackbox --simple --write_buffer_size=524288 --target_file_size_base=524288 --max_bytes_for_level_base=2097152 --compression_type=none --max_background_compactions=8 --value_size_mult=33 --max_key=5000000 --interval=10 --duration=7200 --delrangepercent=3 --delpercent=9 --iterpercent=25 --writepercent=60 --readpercent=3 --prefixpercent=0 --num_iterations=1000 --range_deletion_width=100 --verify_iterator_with_expected_state_one_in=1
```
- Performance benchmark: I used a similar setup as in the blog [post](http://rocksdb.org/blog/2018/11/21/delete-range.html) that introduced DeleteRange, "a database with 5 million data keys, and 10000 range tombstones (ignoring those dropped during compaction) that were written in regular intervals after 4.5 million data keys were written". As expected, the performance with this PR depends on the range tombstone width.
```
# Setup:
TEST_TMPDIR=/dev/shm ./db_bench_main --benchmarks=fillrandom --writes=4500000 --num=5000000
TEST_TMPDIR=/dev/shm ./db_bench_main --benchmarks=overwrite --writes=500000 --num=5000000 --use_existing_db=true --writes_per_range_tombstone=50
# Scan entire DB
TEST_TMPDIR=/dev/shm ./db_bench_main --benchmarks=readseq[-X5] --use_existing_db=true --num=5000000 --disable_auto_compactions=true
# Short range scan (10 Next())
TEST_TMPDIR=/dev/shm/width-100/ ./db_bench_main --benchmarks=seekrandom[-X5] --use_existing_db=true --num=500000 --reads=100000 --seek_nexts=10 --disable_auto_compactions=true
# Long range scan(1000 Next())
TEST_TMPDIR=/dev/shm/width-100/ ./db_bench_main --benchmarks=seekrandom[-X5] --use_existing_db=true --num=500000 --reads=2500 --seek_nexts=1000 --disable_auto_compactions=true
```
Avg over of 10 runs (some slower tests had fews runs):
For the first column (tombstone), 0 means no range tombstone, 100-10000 means width of the 10k range tombstones, and 1 means there is a single range tombstone in the entire DB (width is 1000). The 1 tombstone case is to test regression when there's very few range tombstones in the DB, as no range tombstone is likely to take a different code path than with range tombstones.
- Scan entire DB
| tombstone width | Pre-PR ops/sec | Post-PR ops/sec | ±% |
| ------------- | ------------- | ------------- | ------------- |
| 0 range tombstone |2525600 (± 43564) |2486917 (± 33698) |-1.53% |
| 100 |1853835 (± 24736) |2073884 (± 32176) |+11.87% |
| 1000 |422415 (± 7466) |1115801 (± 22781) |+164.15% |
| 10000 |22384 (± 227) |227919 (± 6647) |+918.22% |
| 1 range tombstone |2176540 (± 39050) |2434954 (± 24563) |+11.87% |
- Short range scan
| tombstone width | Pre-PR ops/sec | Post-PR ops/sec | ±% |
| ------------- | ------------- | ------------- | ------------- |
| 0 range tombstone |35398 (± 533) |35338 (± 569) |-0.17% |
| 100 |28276 (± 664) |31684 (± 331) |+12.05% |
| 1000 |7637 (± 77) |25422 (± 277) |+232.88% |
| 10000 |1367 |28667 |+1997.07% |
| 1 range tombstone |32618 (± 581) |32748 (± 506) |+0.4% |
- Long range scan
| tombstone width | Pre-PR ops/sec | Post-PR ops/sec | ±% |
| ------------- | ------------- | ------------- | ------------- |
| 0 range tombstone |2262 (± 33) |2353 (± 20) |+4.02% |
| 100 |1696 (± 26) |1926 (± 18) |+13.56% |
| 1000 |410 (± 6) |1255 (± 29) |+206.1% |
| 10000 |25 |414 |+1556.0% |
| 1 range tombstone |1957 (± 30) |2185 (± 44) |+11.65% |
- Microbench does not show significant regression: https://gist.github.com/cbi42/59f280f85a59b678e7e5d8561e693b61
Reviewed By: ajkr
Differential Revision: D38450331
Pulled By: cbi42
fbshipit-source-id: b5ef12e8d8c289ed2e163ccdf277f5039b511fca
Summary:
This header file was including everything and the kitchen sink when it did not need to. This resulted in many places including this header when they needed other pieces instead.
Cleaned up this header to only include what was needed and fixed up the remaining code to include what was now missing.
Hopefully, this sort of code hygiene cleanup will speed up the builds...
Pull Request resolved: https://github.com/facebook/rocksdb/pull/8930
Reviewed By: pdillinger
Differential Revision: D31142788
Pulled By: mrambacher
fbshipit-source-id: 6b45de3f300750c79f751f6227dece9cfd44085d
Summary:
When dynamically linking two binaries together, different builds of RocksDB from two sources might cause errors. To provide a tool for user to solve the problem, the RocksDB namespace is changed to a flag which can be overridden in build time.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/6433
Test Plan: Build release, all and jtest. Try to build with ROCKSDB_NAMESPACE with another flag.
Differential Revision: D19977691
fbshipit-source-id: aa7f2d0972e1c31d75339ac48478f34f6cfcfb3e
Summary:
Given that index value is a BlockHandle, which is basically an <offset, size> pair we can apply delta encoding on the values. The first value at each index restart interval encoded the full BlockHandle but the rest encode only the size. Refer to IndexBlockIter::DecodeCurrentValue for the detail of the encoding. This reduces the index size which helps using the block cache more efficiently. The feature is enabled with using format_version 4.
The feature comes with a bit of cpu overhead which should be paid back by the higher cache hits due to smaller index block size.
Results with sysbench read-only using 4k blocks and using 16 index restart interval:
Format 2:
19585 rocksdb read-only range=100
Format 3:
19569 rocksdb read-only range=100
Format 4:
19352 rocksdb read-only range=100
Pull Request resolved: https://github.com/facebook/rocksdb/pull/3983
Differential Revision: D8361343
Pulled By: maysamyabandeh
fbshipit-source-id: f882ee082322acac32b0072e2bdbb0b5f854e651
Summary:
Merging iterator invokes InternalKeyComparator.Compare() frequently to heap merge. By making InternalKeyComparator final and merging iterator to directly use InternalKeyComparator rather than through Iterator interface, we can give compiler a choice to avoid one more virtual function call if possible. I ran readseq benchmark in memory-only use case to make sure the performance at least doesn't regress.
I have to disable the final key word in debug build, as a hack test class depends on overriding the class.
Closes https://github.com/facebook/rocksdb/pull/2860
Differential Revision: D5800461
Pulled By: siying
fbshipit-source-id: ab876f22a09bb5c560740911412336e0e25ccb53
Summary:
merger.h was always a confusing name for me, simply give the file a better name
Closes https://github.com/facebook/rocksdb/pull/1836
Differential Revision: D4505357
Pulled By: IslamAbdelRahman
fbshipit-source-id: 07b28d8
Summary: Siying suggested to keep old code for normal mode prev() for safety
Test Plan: make check -j64
Reviewers: yiwu, andrewkr, sdong
Reviewed By: sdong
Subscribers: andrewkr, dhruba, leveldb
Differential Revision: https://reviews.facebook.net/D65439
Summary: As title, make sure Prev() works as expected with Next() when the current iter->key() in the range of the same prefix in prefix seek mode
Test Plan: make all check -j64 (add prefix_test with PrefixSeekModePrev test case)
Reviewers: andrewkr, sdong, IslamAbdelRahman
Reviewed By: IslamAbdelRahman
Subscribers: yoshinorim, andrewkr, dhruba, leveldb
Differential Revision: https://reviews.facebook.net/D61419
Summary:
Separate a new class InternalIterator from class Iterator, when the look-up is done internally, which also means they operate on key with sequence ID and type.
This change will enable potential future optimizations but for now InternalIterator's functions are still the same as Iterator's.
At the same time, separate the cleanup function to a separate class and let both of InternalIterator and Iterator inherit from it.
Test Plan: Run all existing tests.
Reviewers: igor, yhchiang, anthony, kradhakrishnan, IslamAbdelRahman, rven
Reviewed By: rven
Subscribers: leveldb, dhruba
Differential Revision: https://reviews.facebook.net/D48549
Summary:
In this patch, try to allocate the whole iterator tree starting from DBIter from an arena
1. ArenaWrappedDBIter is created when serves as the entry point of an iterator tree, with an arena in it.
2. Add an option to create iterator from arena for following iterators: DBIter, MergingIterator, MemtableIterator, all mem table's iterators, all table reader's iterators and two level iterator.
3. MergeIteratorBuilder is created to incrementally build the tree of internal iterators. It is passed to mem table list and version set and add iterators to it.
Limitations:
(1) Only DB::NewIterator() without tailing uses the arena. Other cases, including readonly DB and compactions are still from malloc
(2) Two level iterator itself is allocated in arena, but not iterators inside it.
Test Plan: make all check
Reviewers: ljin, haobo
Reviewed By: haobo
Subscribers: leveldb, dhruba, yhchiang, igor
Differential Revision: https://reviews.facebook.net/D18513
Summary:
Provide a framework to profile a query in detail to figure out latency bottleneck. Currently, in Get(), Put() and iterators, 2-3 simple timing is used. We can easily add more profile counters to the framework later.
Test Plan: Enable this profiling in seveal existing tests.
Reviewers: haobo, dhruba, kailiu, emayanke, vamsi, igor
CC: leveldb
Differential Revision: https://reviews.facebook.net/D14001
Conflicts:
table/merger.cc
Summary:
Provide a framework to profile a query in detail to figure out latency bottleneck. Currently, in Get(), Put() and iterators, 2-3 simple timing is used. We can easily add more profile counters to the framework later.
Test Plan: Enable this profiling in seveal existing tests.
Reviewers: haobo, dhruba, kailiu, emayanke, vamsi, igor
CC: leveldb
Differential Revision: https://reviews.facebook.net/D14001
Summary:
Change namespace from leveldb to rocksdb. This allows a single
application to link in open-source leveldb code as well as
rocksdb code into the same process.
Test Plan: compile rocksdb
Reviewers: emayanke
Reviewed By: emayanke
CC: leveldb
Differential Revision: https://reviews.facebook.net/D13287
- Replace raw slice comparison with a call to user comparator.
Added test for custom comparators.
- Fix end of namespace comments.
- Fixed bug in picking inputs for a level-0 compaction.
When finding overlapping files, the covered range may expand
as files are added to the input set. We now correctly expand
the range when this happens instead of continuing to use the
old range. For example, suppose L0 contains files with the
following ranges:
F1: a .. d
F2: c .. g
F3: f .. j
and the initial compaction target is F3. We used to search
for range f..j which yielded {F2,F3}. However we now expand
the range as soon as another file is added. In this case,
when F2 is added, we expand the range to c..j and restart the
search. That picks up file F1 as well.
This change fixes a bug related to deleted keys showing up
incorrectly after a compaction as described in Issue 44.
(Sync with upstream @25072954)
Changyu Bi