@ -32,9 +32,9 @@ use crate::sparql::{
evaluate_query , evaluate_update , EvaluationError , Query , QueryOptions , QueryResults , Update ,
UpdateOptions ,
} ;
#[ cfg(not(target_arch = " wasm32 " )) ]
use crate ::storage ::bulk_load ;
use crate ::storage ::numeric_encoder ::{ Decoder , EncodedQuad , EncodedTerm } ;
#[ cfg(not(target_arch = " wasm32 " )) ]
use crate ::storage ::StorageBulkLoader ;
use crate ::storage ::{
ChainedDecodingQuadIterator , DecodingGraphIterator , Storage , StorageReader , StorageWriter ,
} ;
@ -365,7 +365,7 @@ impl Store {
/// Loads a graph file (i.e. triples) into the store.
///
/// This function is atomic, quite slow and memory hungry. To get much better performances you might want to use [`bulk_load_graph`](Store::bulk_load_graph ).
/// This function is atomic, quite slow and memory hungry. To get much better performances you might want to use the [`bulk_loader`](Store::bulk_loader ).
///
/// Usage example:
/// ```
@ -411,7 +411,7 @@ impl Store {
/// Loads a dataset file (i.e. quads) into the store.
///
/// This function is atomic, quite slow and memory hungry. To get much better performances you might want to [`bulk_load_dataset`](Store::bulk_load_dataset ).
/// This function is atomic, quite slow and memory hungry. To get much better performances you might want to use the [`bulk_loader`](Store::bulk_loader ).
///
/// Usage example:
/// ```
@ -477,7 +477,7 @@ impl Store {
/// Adds atomically a set of quads to this store.
///
/// Warning: This operation uses a memory heavy transaction internally, use [`bulk_extend`](Store::bulk_extend ) if you plan to add ten of millions of triples.
/// Warning: This operation uses a memory heavy transaction internally, use the [`bulk_loader`](Store::bulk_loader ) if you plan to add ten of millions of triples.
pub fn extend (
& self ,
quads : impl IntoIterator < Item = impl Into < Quad > > ,
@ -753,15 +753,7 @@ impl Store {
self . storage . backup ( target_directory . as_ref ( ) )
}
/// Loads a dataset file efficiently into the store.
///
/// This function is optimized for large dataset loading speed. For small files, [`load_dataset`](Store::load_dataset) might be more convenient.
///
/// Warning: This method is not atomic.
/// If the parsing fails in the middle of the file, only a part of it may be written to the store.
/// Results might get weird if you delete data during the loading process.
///
/// Warning: This method is optimized for speed. It uses multiple threads and GBs of RAM on large files.
/// Creates a bulk loader allowing to load at lot of data quickly into the store.
///
/// Usage example:
/// ```
@ -771,9 +763,9 @@ impl Store {
///
/// let store = Store::new()?;
///
/// // insertion
/// // quads file insertion
/// let file = b"<http://example.com> <http://example.com> <http://example.com> <http://example.com> .";
/// store.bulk_load_dataset(file.as_ref(), DatasetFormat::NQuads, None)?;
/// store.bulk_loader().load _dataset(file.as_ref(), DatasetFormat::NQuads, None)?;
///
/// // we inspect the store contents
/// let ex = NamedNodeRef::new("http://example.com")?;
@ -781,81 +773,10 @@ impl Store {
/// # Result::<_, Box<dyn std::error::Error>>::Ok(())
/// ```
#[ cfg(not(target_arch = " wasm32 " )) ]
pub fn bulk_load_dataset (
& self ,
reader : impl BufRead ,
format : DatasetFormat ,
base_iri : Option < & str > ,
) -> Result < ( ) , LoaderError > {
let mut parser = DatasetParser ::from_format ( format ) ;
if let Some ( base_iri ) = base_iri {
parser = parser
. with_base_iri ( base_iri )
. map_err ( | e | ParseError ::invalid_base_iri ( base_iri , e ) ) ? ;
}
bulk_load ( & self . storage , parser . read_quads ( reader ) ? )
}
/// Loads a dataset file efficiently into the store.
///
/// This function is optimized for large dataset loading speed. For small files, [`load_graph`](Store::load_graph) might be more convenient.
///
/// Warning: This method is not atomic.
/// If the parsing fails in the middle of the file, only a part of it may be written to the store.
/// Results might get weird if you delete data during the loading process.
///
/// Warning: This method is optimized for speed. It uses multiple threads and GBs of RAM on large files.
///
/// Usage example:
/// ```
/// use oxigraph::store::Store;
/// use oxigraph::io::GraphFormat;
/// use oxigraph::model::*;
///
/// let store = Store::new()?;
///
/// // insertion
/// let file = b"<http://example.com> <http://example.com> <http://example.com> .";
/// store.bulk_load_graph(file.as_ref(), GraphFormat::NTriples, GraphNameRef::DefaultGraph, None)?;
///
/// // we inspect the store contents
/// let ex = NamedNodeRef::new("http://example.com")?;
/// assert!(store.contains(QuadRef::new(ex, ex, ex, GraphNameRef::DefaultGraph))?);
/// # Result::<_, Box<dyn std::error::Error>>::Ok(())
/// ```
#[ cfg(not(target_arch = " wasm32 " )) ]
pub fn bulk_load_graph < ' a > (
& self ,
reader : impl BufRead ,
format : GraphFormat ,
to_graph_name : impl Into < GraphNameRef < ' a > > ,
base_iri : Option < & str > ,
) -> Result < ( ) , LoaderError > {
let mut parser = GraphParser ::from_format ( format ) ;
if let Some ( base_iri ) = base_iri {
parser = parser
. with_base_iri ( base_iri )
. map_err ( | e | ParseError ::invalid_base_iri ( base_iri , e ) ) ? ;
}
let to_graph_name = to_graph_name . into ( ) ;
bulk_load (
& self . storage ,
parser
. read_triples ( reader ) ?
. map ( | r | r . map ( | q | q . in_graph ( to_graph_name . into_owned ( ) ) ) ) ,
)
pub fn bulk_loader ( & self ) -> BulkLoader {
BulkLoader {
storage : StorageBulkLoader ::new ( self . storage . clone ( ) ) ,
}
/// Adds a set of triples to this store using bulk load.
///
/// Warning: This method is not atomic.
/// If the process fails in the middle of the file, only a part of the data may be written to the store.
/// Results might get weird if you delete data during the loading process.
///
/// Warning: This method is optimized for speed. It uses multiple threads and GBs of RAM on large files.
#[ cfg(not(target_arch = " wasm32 " )) ]
pub fn bulk_extend ( & self , quads : impl IntoIterator < Item = Quad > ) -> Result < ( ) , StorageError > {
bulk_load ::< StorageError , _ , _ > ( & self . storage , quads . into_iter ( ) . map ( Ok ) )
}
/// Validates that all the store invariants held in the data
@ -1155,9 +1076,7 @@ impl<'a> Transaction<'a> {
self . writer . insert ( quad . into ( ) )
}
/// Adds atomically a set of quads to this store.
///
/// Warning: This operation uses a memory heavy transaction internally, use [`bulk_extend`](Store::bulk_extend) if you plan to add ten of millions of triples.
/// Adds a set of quads to this store.
pub fn extend < ' b > (
& mut self ,
quads : impl IntoIterator < Item = impl Into < QuadRef < ' b > > > ,
@ -1346,6 +1265,148 @@ impl Iterator for GraphNameIter {
}
}
/// A bulk loader allowing to load at lot of data quickly into the store.
///
/// Warning: The operations provided here are not atomic.
/// If the operation fails in the middle, only a part of the data may be written to the store.
/// Results might get weird if you delete data during the loading process.
///
/// Warning: It is optimized for speed. It uses multiple threads and GBs of RAM on large files.
///
/// Usage example with loading a dataset:
/// ```
/// use oxigraph::store::Store;
/// use oxigraph::io::DatasetFormat;
/// use oxigraph::model::*;
///
/// let store = Store::new()?;
///
/// // quads file insertion
/// let file = b"<http://example.com> <http://example.com> <http://example.com> <http://example.com> .";
/// store.bulk_loader().load_dataset(file.as_ref(), DatasetFormat::NQuads, None)?;
///
/// // we inspect the store contents
/// let ex = NamedNodeRef::new("http://example.com")?;
/// assert!(store.contains(QuadRef::new(ex, ex, ex, ex))?);
/// # Result::<_, Box<dyn std::error::Error>>::Ok(())
/// ```
#[ cfg(not(target_arch = " wasm32 " )) ]
pub struct BulkLoader {
storage : StorageBulkLoader ,
}
#[ cfg(not(target_arch = " wasm32 " )) ]
impl BulkLoader {
/// Adds a `callback` evaluated from time to time with the number of loaded triples.
pub fn on_progress ( self , callback : impl Fn ( u64 ) + ' static ) -> Self {
Self {
storage : self . storage . on_progress ( callback ) ,
}
}
/// Loads a dataset file using the bulk loader.
///
/// This function is optimized for large dataset loading speed. For small files, [`Store::load_dataset`] might be more convenient.
///
/// Warning: This method is not atomic.
/// If the parsing fails in the middle of the file, only a part of it may be written to the store.
/// Results might get weird if you delete data during the loading process.
///
/// Warning: This method is optimized for speed. It uses multiple threads and GBs of RAM on large files.
///
/// Usage example:
/// ```
/// use oxigraph::store::Store;
/// use oxigraph::io::DatasetFormat;
/// use oxigraph::model::*;
///
/// let store = Store::new()?;
///
/// // insertion
/// let file = b"<http://example.com> <http://example.com> <http://example.com> <http://example.com> .";
/// store.bulk_loader().load_dataset(file.as_ref(), DatasetFormat::NQuads, None)?;
///
/// // we inspect the store contents
/// let ex = NamedNodeRef::new("http://example.com")?;
/// assert!(store.contains(QuadRef::new(ex, ex, ex, ex))?);
/// # Result::<_, Box<dyn std::error::Error>>::Ok(())
/// ```
pub fn load_dataset (
& self ,
reader : impl BufRead ,
format : DatasetFormat ,
base_iri : Option < & str > ,
) -> Result < ( ) , LoaderError > {
let mut parser = DatasetParser ::from_format ( format ) ;
if let Some ( base_iri ) = base_iri {
parser = parser
. with_base_iri ( base_iri )
. map_err ( | e | ParseError ::invalid_base_iri ( base_iri , e ) ) ? ;
}
self . storage . load ( parser . read_quads ( reader ) ? )
}
/// Loads a graph file using the bulk loader.
///
/// This function is optimized for large graph loading speed. For small files, [`Store::load_graph`] might be more convenient.
///
/// Warning: This method is not atomic.
/// If the parsing fails in the middle of the file, only a part of it may be written to the store.
/// Results might get weird if you delete data during the loading process.
///
/// Warning: This method is optimized for speed. It uses multiple threads and GBs of RAM on large files.
///
/// Usage example:
/// ```
/// use oxigraph::store::Store;
/// use oxigraph::io::GraphFormat;
/// use oxigraph::model::*;
///
/// let store = Store::new()?;
///
/// // insertion
/// let file = b"<http://example.com> <http://example.com> <http://example.com> .";
/// store.bulk_loader().load_graph(file.as_ref(), GraphFormat::NTriples, GraphNameRef::DefaultGraph, None)?;
///
/// // we inspect the store contents
/// let ex = NamedNodeRef::new("http://example.com")?;
/// assert!(store.contains(QuadRef::new(ex, ex, ex, GraphNameRef::DefaultGraph))?);
/// # Result::<_, Box<dyn std::error::Error>>::Ok(())
/// ```
pub fn load_graph < ' a > (
& self ,
reader : impl BufRead ,
format : GraphFormat ,
to_graph_name : impl Into < GraphNameRef < ' a > > ,
base_iri : Option < & str > ,
) -> Result < ( ) , LoaderError > {
let mut parser = GraphParser ::from_format ( format ) ;
if let Some ( base_iri ) = base_iri {
parser = parser
. with_base_iri ( base_iri )
. map_err ( | e | ParseError ::invalid_base_iri ( base_iri , e ) ) ? ;
}
let to_graph_name = to_graph_name . into ( ) ;
self . storage . load (
parser
. read_triples ( reader ) ?
. map ( | r | r . map ( | q | q . in_graph ( to_graph_name . into_owned ( ) ) ) ) ,
)
}
/// Adds a set of quads using the bulk loader.
///
/// Warning: This method is not atomic.
/// If the process fails in the middle of the file, only a part of the data may be written to the store.
/// Results might get weird if you delete data during the loading process.
///
/// Warning: This method is optimized for speed. It uses multiple threads and GBs of RAM on large files.
pub fn load_quads ( & self , quads : impl IntoIterator < Item = Quad > ) -> Result < ( ) , StorageError > {
self . storage
. load ::< StorageError , _ , _ > ( quads . into_iter ( ) . map ( Ok ) )
}
}
#[ test ]
fn store ( ) -> Result < ( ) , StorageError > {
use crate ::model ::* ;
Tpt
3 years ago