Renames oxigraph-server to oxigraph(-cli)

pull/625/head
Tpt 1 year ago committed by Thomas Tanon
parent 99abe69ba1
commit bdedcc47e3
  1. 52
      .github/workflows/artifacts.yml
  2. 10
      .github/workflows/tests.yml
  3. 24
      Cargo.lock
  4. 4
      Cargo.toml
  5. 4
      README.md
  6. 8
      bench/bsbm_oxigraph.sh
  7. 12
      cli/Cargo.toml
  8. 8
      cli/Dockerfile
  9. 38
      cli/README.md
  10. 0
      cli/logo.svg
  11. 6
      cli/src/main.rs
  12. 0
      cli/templates/query.html
  13. 2
      js/Cargo.toml
  14. 2
      lib/README.md
  15. 1
      server
  16. 2
      testsuite/Cargo.toml

@ -26,28 +26,28 @@ jobs:
echo -e "\n\n[target.aarch64-unknown-linux-gnu]\nlinker = \"aarch64-linux-gnu-gcc\"" >> .cargo/config.toml
- uses: Swatinem/rust-cache@v2
- run: cargo build --release
working-directory: ./server
working-directory: ./cli
- run: cargo build --release --target aarch64-unknown-linux-gnu
working-directory: ./server
working-directory: ./cli
env:
BINDGEN_EXTRA_CLANG_ARGS: --sysroot /usr/aarch64-linux-gnu
- uses: actions/upload-artifact@v3
with:
name: oxigraph_server_x86_64_linux_gnu
path: target/release/oxigraph_server
name: oxigraph_x86_64_linux_gnu
path: target/release/oxigraph
- uses: actions/upload-artifact@v3
with:
name: oxigraph_server_aarch64_linux_gnu
path: target/aarch64-unknown-linux-gnu/release/oxigraph_server
- run: mv target/release/oxigraph_server oxigraph_server_${{ github.event.release.tag_name }}_x86_64_linux_gnu
name: oxigraph_aarch64_linux_gnu
path: target/aarch64-unknown-linux-gnu/release/oxigraph
- run: mv target/release/oxigraph oxigraph_${{ github.event.release.tag_name }}_x86_64_linux_gnu
if: github.event_name == 'release'
- run: mv target/aarch64-unknown-linux-gnu/release/oxigraph_server oxigraph_server_${{ github.event.release.tag_name }}_aarch64_linux_gnu
- run: mv target/aarch64-unknown-linux-gnu/release/oxigraph oxigraph_${{ github.event.release.tag_name }}_aarch64_linux_gnu
if: github.event_name == 'release'
- uses: softprops/action-gh-release@v1
with:
files: |
oxigraph_server_${{ github.event.release.tag_name }}_x86_64_linux_gnu
oxigraph_server_${{ github.event.release.tag_name }}_aarch64_linux_gnu
oxigraph_${{ github.event.release.tag_name }}_x86_64_linux_gnu
oxigraph_${{ github.event.release.tag_name }}_aarch64_linux_gnu
if: github.event_name == 'release'
binary_mac:
@ -63,26 +63,26 @@ jobs:
- run: rustup update && rustup target add aarch64-apple-darwin
- uses: Swatinem/rust-cache@v2
- run: cargo build --release
working-directory: ./server
working-directory: ./cli
- run: cargo build --release --target aarch64-apple-darwin
working-directory: ./server
working-directory: ./cli
- uses: actions/upload-artifact@v3
with:
name: oxigraph_server_x86_64_apple
path: target/release/oxigraph_server
name: oxigraph_x86_64_apple
path: target/release/oxigraph
- uses: actions/upload-artifact@v3
with:
name: oxigraph_server_aarch64_apple
path: target/aarch64-apple-darwin/release/oxigraph_server
- run: mv target/release/oxigraph_server oxigraph_server_${{ github.event.release.tag_name }}_x86_64_apple
name: oxigraph_aarch64_apple
path: target/aarch64-apple-darwin/release/oxigraph
- run: mv target/release/oxigraph oxigraph_${{ github.event.release.tag_name }}_x86_64_apple
if: github.event_name == 'release'
- run: mv target/aarch64-apple-darwin/release/oxigraph_server oxigraph_server_${{ github.event.release.tag_name }}_aarch64_apple
- run: mv target/aarch64-apple-darwin/release/oxigraph oxigraph_${{ github.event.release.tag_name }}_aarch64_apple
if: github.event_name == 'release'
- uses: softprops/action-gh-release@v1
with:
files: |
oxigraph_server_${{ github.event.release.tag_name }}_x86_64_apple
oxigraph_server_${{ github.event.release.tag_name }}_aarch64_apple
oxigraph_${{ github.event.release.tag_name }}_x86_64_apple
oxigraph_${{ github.event.release.tag_name }}_aarch64_apple
if: github.event_name == 'release'
binary_windows:
@ -95,16 +95,16 @@ jobs:
- uses: Swatinem/rust-cache@v2
- run: Remove-Item -LiteralPath "C:\msys64\" -Force -Recurse
- run: cargo build --release
working-directory: ./server
working-directory: ./cli
- uses: actions/upload-artifact@v3
with:
name: oxigraph_server_x86_64_windows_msvc
path: target/release/oxigraph_server.exe
- run: mv target/release/oxigraph_server.exe oxigraph_server_${{ github.event.release.tag_name }}_x86_64_windows_msvc.exe
name: oxigraph_x86_64_windows_msvc
path: target/release/oxigraph.exe
- run: mv target/release/oxigraph.exe oxigraph_${{ github.event.release.tag_name }}_x86_64_windows_msvc.exe
if: github.event_name == 'release'
- uses: softprops/action-gh-release@v1
with:
files: oxigraph_server_${{ github.event.release.tag_name }}_x86_64_windows_msvc.exe
files: oxigraph_${{ github.event.release.tag_name }}_x86_64_windows_msvc.exe
if: github.event_name == 'release'
wheel_linux:
@ -337,7 +337,7 @@ jobs:
working-directory: ./lib
continue-on-error: true
- run: cargo publish
working-directory: ./server
working-directory: ./cli
homebrew:
if: "github.event_name == 'release' && !contains('-', github.event.release.tag_name)"

@ -51,7 +51,7 @@ jobs:
- run: cargo clippy
working-directory: ./python
- run: cargo clippy
working-directory: ./server
working-directory: ./cli
- run: cargo clippy
working-directory: ./testsuite
@ -119,7 +119,7 @@ jobs:
- run: cargo clippy -- -D warnings -D clippy::all
working-directory: ./python
- run: cargo clippy -- -D warnings -D clippy::all
working-directory: ./server
working-directory: ./cli
- run: cargo clippy -- -D warnings -D clippy::all
working-directory: ./testsuite
@ -164,7 +164,7 @@ jobs:
- run: rustup update
- uses: Swatinem/rust-cache@v2
- run: cargo install cargo-semver-checks || true
- run: cargo semver-checks check-release --exclude oxrocksdb-sys --exclude oxigraph_js --exclude pyoxigraph --exclude oxigraph_testsuite --exclude oxigraph_server
- run: cargo semver-checks check-release --exclude oxrocksdb-sys --exclude oxigraph-js --exclude pyoxigraph --exclude oxigraph-testsuite --exclude oxigraph-cli
test_linux:
runs-on: ubuntu-latest
@ -187,7 +187,7 @@ jobs:
- run: rustup update && rustup override set nightly
- run: sudo apt install -y llvm
- uses: Swatinem/rust-cache@v2
- run: cargo test --tests --target x86_64-unknown-linux-gnu --workspace --exclude pyoxigraph --exclude oxigraph_testsuite --exclude oxigraph_server
- run: cargo test --tests --target x86_64-unknown-linux-gnu --workspace --exclude pyoxigraph --exclude oxigraph-testsuite --exclude oxigraph-cli
env:
RUST_BACKTRACE: 1
RUSTFLAGS: -Z sanitizer=address
@ -215,7 +215,7 @@ jobs:
- uses: Swatinem/rust-cache@v2
- uses: taiki-e/install-action@wasmtime
- run: cargo install cargo-wasi || true
- run: cargo wasi test --workspace --exclude oxigraph_js --exclude oxigraph_server --exclude oxigraph_testsuite --exclude oxrocksdb-sys --exclude pyoxigraph
- run: cargo wasi test --workspace --exclude oxigraph-js --exclude oxigraph-cli --exclude oxigraph-testsuite --exclude oxrocksdb-sys --exclude pyoxigraph
env:
RUST_BACKTRACE: 1

24
Cargo.lock generated

@ -973,17 +973,7 @@ dependencies = [
]
[[package]]
name = "oxigraph_js"
version = "0.4.0-alpha.1-dev"
dependencies = [
"console_error_panic_hook",
"js-sys",
"oxigraph",
"wasm-bindgen",
]
[[package]]
name = "oxigraph_server"
name = "oxigraph-cli"
version = "0.4.0-alpha.1-dev"
dependencies = [
"anyhow",
@ -1002,7 +992,17 @@ dependencies = [
]
[[package]]
name = "oxigraph_testsuite"
name = "oxigraph-js"
version = "0.4.0-alpha.1-dev"
dependencies = [
"console_error_panic_hook",
"js-sys",
"oxigraph",
"wasm-bindgen",
]
[[package]]
name = "oxigraph-testsuite"
version = "0.4.0-alpha.1-dev"
dependencies = [
"anyhow",

@ -13,7 +13,7 @@ members = [
"lib/sparql-smith",
"oxrocksdb-sys",
"python",
"server",
"cli",
"testsuite"
]
resolver = "2"
@ -30,5 +30,5 @@ rust-version = "1.70"
lto = true
codegen-units = 1
[profile.release.package.oxigraph_js]
[profile.release.package.oxigraph-js]
opt-level = "z"

@ -29,8 +29,8 @@ It is split into multiple parts:
- [`pyoxigraph` that exposes Oxigraph to the Python world](https://pyoxigraph.readthedocs.io/). Its source code is in the `python` directory. [![PyPI](https://img.shields.io/pypi/v/pyoxigraph)](https://pypi.org/project/pyoxigraph/)
- [JavaScript bindings for Oxigraph](https://www.npmjs.com/package/oxigraph). WebAssembly is used to package Oxigraph into a NodeJS compatible NPM package. Its source code is in the `js` directory.
[![npm](https://img.shields.io/npm/v/oxigraph)](https://www.npmjs.com/package/oxigraph)
- [Oxigraph server](https://crates.io/crates/oxigraph_server) that provides a standalone binary of a web server implementing the [SPARQL 1.1 Protocol](https://www.w3.org/TR/sparql11-protocol/) and the [SPARQL 1.1 Graph Store Protocol](https://www.w3.org/TR/sparql11-http-rdf-update/). Its source code is in the `server` directory.
[![Latest Version](https://img.shields.io/crates/v/oxigraph_server.svg)](https://crates.io/crates/oxigraph_server)
- [Oxigraph binary](https://crates.io/crates/oxigraph-cli) that provides a standalone command line tool allowing to manipulate RDF data and spawn a a web server implementing the [SPARQL 1.1 Protocol](https://www.w3.org/TR/sparql11-protocol/) and the [SPARQL 1.1 Graph Store Protocol](https://www.w3.org/TR/sparql11-http-rdf-update/). Its source code is in the `cli` directory.
[![Latest Version](https://img.shields.io/crates/v/oxigraph-cli.svg)](https://crates.io/crates/oxigraph-cli)
Oxigraph implements the following specifications:

@ -6,10 +6,10 @@ PARALLELISM=16
set -eu
cd bsbm-tools
./generate -fc -pc ${DATASET_SIZE} -s nt -fn "explore-${DATASET_SIZE}" -ud -ufn "explore-update-${DATASET_SIZE}"
cargo build --release --manifest-path="../../server/Cargo.toml"
VERSION=$(./../../target/release/oxigraph_server --version | sed 's/oxigraph_server //g')
./../../target/release/oxigraph_server --location oxigraph_data load --file "explore-${DATASET_SIZE}.nt"
./../../target/release/oxigraph_server --location oxigraph_data serve --bind 127.0.0.1:7878 &
cargo build --release --manifest-path="../../cli/Cargo.toml"
VERSION=$(./../../target/release/oxigraph --version | sed 's/oxigraph //g')
./../../target/release/oxigraph --location oxigraph_data load --file "explore-${DATASET_SIZE}.nt"
./../../target/release/oxigraph --location oxigraph_data serve --bind 127.0.0.1:7878 &
sleep 1
./testdriver -mt ${PARALLELISM} -ucf usecases/explore/sparql.txt -o "../bsbm.explore.oxigraph.${VERSION}.${DATASET_SIZE}.${PARALLELISM}.xml" http://127.0.0.1:7878/query
./testdriver -mt ${PARALLELISM} -ucf usecases/exploreAndUpdate/sparql.txt -o "../bsbm.exploreAndUpdate.oxigraph.${VERSION}.${DATASET_SIZE}.${PARALLELISM}.xml" http://127.0.0.1:7878/query -u http://127.0.0.1:7878/update -udataset "explore-update-${DATASET_SIZE}.nt"

@ -1,19 +1,23 @@
[package]
name = "oxigraph_server"
name = "oxigraph-cli"
version.workspace = true
authors.workspace = true
license.workspace = true
readme = "README.md"
keywords = ["RDF", "SPARQL", "graph-database", "database"]
categories = ["command-line-utilities", "database"]
repository = "https://github.com/oxigraph/oxigraph/tree/main/server"
homepage = "https://oxigraph.org/server/"
repository = "https://github.com/oxigraph/oxigraph/tree/main/cli"
homepage = "https://oxigraph.org/cli/"
description = """
Oxigraph SPARQL HTTP server
Oxigraph command line toolkit and SPARQL HTTP server
"""
edition.workspace = true
rust-version.workspace = true
[[bin]]
name = "oxigraph"
path = "src/main.rs"
[dependencies]
anyhow = "1"
oxhttp = { version = "0.1", features = ["rayon"] }

@ -8,18 +8,18 @@ RUN apt-get update && \
rustup target add aarch64-unknown-linux-gnu ; \
fi
COPY . /oxigraph
WORKDIR /oxigraph/server
WORKDIR /oxigraph/cli
RUN if [ "$BUILDARCH" != "$TARGETARCH" ] && [ "$TARGETARCH" = "arm64" ] ; \
then \
export CARGO_TARGET_AARCH64_UNKNOWN_LINUX_GNU_LINKER=aarch64-linux-gnu-gcc && \
export BINDGEN_EXTRA_CLANG_ARGS="--sysroot /usr/aarch64-linux-gnu" && \
cargo build --release --target aarch64-unknown-linux-gnu && \
mv /oxigraph/target/aarch64-unknown-linux-gnu/release/oxigraph_server /oxigraph/target/release/oxigraph_server ; \
mv /oxigraph/target/aarch64-unknown-linux-gnu/release/oxigraph /oxigraph/target/release/oxigraph ; \
else \
cargo build --release ; \
fi
FROM --platform=$TARGETPLATFORM gcr.io/distroless/cc-debian11
COPY --from=builder /oxigraph/target/release/oxigraph_server /usr/local/bin/oxigraph_server
ENTRYPOINT [ "/usr/local/bin/oxigraph_server" ]
COPY --from=builder /oxigraph/target/release/oxigraph /usr/local/bin/oxigraph
ENTRYPOINT [ "/usr/local/bin/oxigraph" ]
CMD [ "serve", "--location", "/data", "--bind", "0.0.0.0:7878" ]

@ -1,17 +1,15 @@
Oxigraph Server
===============
Oxigraph CLI
============
[![Latest Version](https://img.shields.io/crates/v/oxigraph_server.svg)](https://crates.io/crates/oxigraph_server)
[![Crates.io downloads](https://img.shields.io/crates/d/oxigraph_server)](https://crates.io/crates/oxigraph_server)
[![Latest Version](https://img.shields.io/crates/v/oxigraph-cli.svg)](https://crates.io/crates/oxigraph-cli)
[![Crates.io downloads](https://img.shields.io/crates/d/oxigraph-cli)](https://crates.io/crates/oxigraph-cli)
[![Conda](https://img.shields.io/conda/vn/conda-forge/oxigraph-server)](https://anaconda.org/conda-forge/oxigraph-server)
[![actions status](https://github.com/oxigraph/oxigraph/workflows/build/badge.svg)](https://github.com/oxigraph/oxigraph/actions)
[![Gitter](https://badges.gitter.im/oxigraph/community.svg)](https://gitter.im/oxigraph/community)
Oxigraph Server is a standalone HTTP server providing a graph database implementing the [SPARQL](https://www.w3.org/TR/sparql11-overview/) standard.
Its goal is to provide a compliant, safe, and fast graph database based on the [RocksDB](https://rocksdb.org/) key-value store.
It is written in Rust.
It also provides a set of utility functions for reading, writing, and processing RDF files.
Oxigraph CLI is a graph database implementing the [SPARQL](https://www.w3.org/TR/sparql11-overview/) standard.
It is packaged as a command line tool allowing to manipulate an RDF files, query them using SPARQL...
It also allows to spawn a HTTP server on top of the database.
Oxigraph is in heavy development and SPARQL query evaluation has not been optimized yet.
@ -36,15 +34,15 @@ A preliminary benchmark [is provided](../bench/README.md).
You need to have [a recent stable version of Rust and Cargo installed](https://www.rust-lang.org/tools/install).
To download, build and install the latest released version run `cargo install oxigraph_server`.
To download, build and install the latest released version run `cargo install oxigraph-cli`.
There is no need to clone the git repository.
To compile the server from source, clone this git repository including its submodules (`git clone --recursive https://github.com/oxigraph/oxigraph.git`), and execute `cargo build --release` in the `server` directory to compile the full server after having downloaded its dependencies.
It will create a fat binary in `target/release/oxigraph_server`.
To compile the command line tool from source, clone this git repository including its submodules (`git clone --recursive https://github.com/oxigraph/oxigraph.git`), and execute `cargo build --release` in the `cli` directory to compile the full binary after having downloaded its dependencies.
It will create a fat binary in `target/release/oxigraph`.
## Usage
Run `oxigraph_server serve --location my_data_storage_directory` to start the server where `my_data_storage_directory` is the directory where you want Oxigraph data to be stored. It listens by default on `localhost:7878`.
Run `oxigraph serve --location my_data_storage_directory` to start the server where `my_data_storage_directory` is the directory where you want Oxigraph data to be stored. It listens by default on `localhost:7878`.
The server provides an HTML UI, based on [YASGUI](https://yasgui.triply.cc), with a form to execute SPARQL requests.
@ -78,10 +76,10 @@ It provides the following REST actions:
```
will add the N-Quads file `MY_FILE.nq` to the server dataset.
Use `oxigraph_server --help` to see the possible options when starting the server.
Use `oxigraph --help` to see the possible options when starting the server.
It is also possible to load RDF data offline using bulk loading:
`oxigraph_server load --location my_data_storage_directory --file my_file.nq`
`oxigraph load --location my_data_storage_directory --file my_file.nq`
## Using a Docker image
@ -217,14 +215,14 @@ To install Oxigraph server using Homebrew do:
brew tap oxigraph/oxigraph
brew install oxigraph
```
It installs the `oxigraph_server` binary. [See the usage documentation to know how to use it](#usage).
It installs the `oxigraph` binary. [See the usage documentation to know how to use it](#usage).
## Systemd
It is possible to run Oxigraph in the background using systemd.
For that, you can use the following `oxigraph_server.service` file (it might be inserted into `/etc/systemd/system/` or `$HOME/.config/systemd/user`):
For that, you can use the following `oxigraph.service` file (it might be inserted into `/etc/systemd/system/` or `$HOME/.config/systemd/user`):
```ini
[Unit]
Description=Oxigraph database server
@ -233,7 +231,7 @@ Wants=network-online.target
[Service]
Type=notify
ExecStart=/PATH/TO/oxigraph_server serve --location /PATH/TO/OXIGRAPH/DATA
ExecStart=/PATH/TO/oxigraph serve --location /PATH/TO/OXIGRAPH/DATA
[Install]
WantedBy=multi-user.target
@ -242,8 +240,8 @@ WantedBy=multi-user.target
## Migration guide
### From 0.2 to 0.3
* The cli API has been completely rewritten. To start the server run `oxigraph_server serve --location MY_STORAGE` instead of `oxigraph_server --file MY_STORAGE`.
* Fast data bulk loading is not supported using `oxigraph_server load --location MY_STORAGE --file MY_FILE`. The file format is guessed from the extension (`.nt`, `.ttl`, `.nq`...).
* The cli API has been completely rewritten. To start the server run `oxigraph serve --location MY_STORAGE` instead of `oxigraph --file MY_STORAGE`.
* Fast data bulk loading is not supported using `oxigraph load --location MY_STORAGE --file MY_FILE`. The file format is guessed from the extension (`.nt`, `.ttl`, `.nq`...).
* [RDF-star](https://w3c.github.io/rdf-star/cg-spec/2021-12-17.html) is now implemented.
* All operations are now transactional using the "repeatable read" isolation level:
the store only exposes changes that have been "committed" (i.e. no partial writes)

Before

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@ -38,8 +38,8 @@ const HTML_ROOT_PAGE: &str = include_str!("../templates/query.html");
const LOGO: &str = include_str!("../logo.svg");
#[derive(Parser)]
#[command(about, version)]
/// Oxigraph SPARQL server.
#[command(about, version, name = "oxigraph")]
/// Oxigraph command line toolkit and SPARQL HTTP server.
struct Args {
#[command(subcommand)]
command: Command,
@ -1830,7 +1830,7 @@ mod tests {
fn cli_command() -> Result<Command> {
Ok(Command::from_std(
escargot::CargoBuild::new()
.bin(env!("CARGO_PKG_NAME"))
.bin("oxigraph")
.manifest_path(format!("{}/Cargo.toml", env!("CARGO_MANIFEST_DIR")))
.run()?
.command(),

@ -1,5 +1,5 @@
[package]
name = "oxigraph_js"
name = "oxigraph-js"
version.workspace = true
authors.workspace = true
license.workspace = true

@ -14,7 +14,7 @@ It also provides a set of utility functions for reading, writing, and processing
Oxigraph is in heavy development and SPARQL query evaluation has not been optimized yet.
Oxigraph also provides [a standalone HTTP server](https://crates.io/crates/oxigraph_server) and [a Python library](https://pyoxigraph.readthedocs.io/) based on this library.
Oxigraph also provides [a standalone HTTP server](https://crates.io/crates/oxigraph-cli) and [a Python library](https://pyoxigraph.readthedocs.io/) based on this library.
Oxigraph implements the following specifications:

@ -0,0 +1 @@
cli

@ -1,5 +1,5 @@
[package]
name = "oxigraph_testsuite"
name = "oxigraph-testsuite"
version.workspace = true
authors.workspace = true
license.workspace = true

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