Avoid user key copying for Get/Put/Write with user-timestamp (#5502)

Summary:
In previous https://github.com/facebook/rocksdb/issues/5079, we added user-specified timestamp to `DB::Get()` and `DB::Put()`. Limitation is that these two functions may cause extra memory allocation and key copy. The reason is that `WriteBatch` does not allocate extra memory for timestamps because it is not aware of timestamp size, and we did not provide an API to assign/update timestamp of each key within a `WriteBatch`.
We address these issues in this PR by doing the following.
1. Add a `timestamp_size_` to `WriteBatch` so that `WriteBatch` can take timestamps into account when calling `WriteBatch::Put`, `WriteBatch::Delete`, etc.
2. Add APIs `WriteBatch::AssignTimestamp` and `WriteBatch::AssignTimestamps` so that application can assign/update timestamps for each key in a `WriteBatch`.
3. Avoid key copy in `GetImpl` by adding new constructor to `LookupKey`.

Test plan (on devserver):
```
$make clean && COMPILE_WITH_ASAN=1 make -j32 all
$./db_basic_test --gtest_filter=Timestamp/DBBasicTestWithTimestampWithParam.PutAndGet/*
$make check
```
If the API extension looks good, I will add more unit tests.

Some simple benchmark using db_bench.
```
$rm -rf /dev/shm/dbbench/* && TEST_TMPDIR=/dev/shm ./db_bench -benchmarks=fillseq,readrandom -num=1000000
$rm -rf /dev/shm/dbbench/* && TEST_TMPDIR=/dev/shm ./db_bench -benchmarks=fillrandom -num=1000000 -disable_wal=true
```
Master is at a78503bd6c.
```
|        | readrandom | fillrandom |
| master | 15.53 MB/s | 25.97 MB/s |
| PR5502 | 16.70 MB/s | 25.80 MB/s |
```
Pull Request resolved: https://github.com/facebook/rocksdb/pull/5502

Differential Revision: D16340894

Pulled By: riversand963

fbshipit-source-id: 51132cf792be07d1efc3ac33f5768c4ee2608bb8

.gitignore

@@ -49,6 +49,7 @@ rocksdb_undump
 db_test2
 trace_analyzer
 trace_analyzer_test
+block_cache_trace_analyzer
 .DS_Store
 
 java/out

db/db_impl/db_impl.cc

@@ -1441,17 +1441,8 @@ ColumnFamilyHandle* DBImpl::PersistentStatsColumnFamily() const {
 Status DBImpl::Get(const ReadOptions& read_options,
                    ColumnFamilyHandle* column_family, const Slice& key,
                    PinnableSlice* value) {
-  if (nullptr == read_options.timestamp) {
   return GetImpl(read_options, column_family, key, value);
 }
-  Slice akey;
-  std::string buf;
-  Status s = AppendTimestamp(key, *(read_options.timestamp), &akey, &buf);
-  if (s.ok()) {
-    s = GetImpl(read_options, column_family, akey, value);
-  }
-  return s;
-}
 
 Status DBImpl::GetImpl(const ReadOptions& read_options,
                        ColumnFamilyHandle* column_family, const Slice& key,
@@ -1528,7 +1519,7 @@ Status DBImpl::GetImpl(const ReadOptions& read_options,
   // First look in the memtable, then in the immutable memtable (if any).
   // s is both in/out. When in, s could either be OK or MergeInProgress.
   // merge_operands will contain the sequence of merges in the latter case.
-  LookupKey lkey(key, snapshot);
+  LookupKey lkey(key, snapshot, read_options.timestamp);
   PERF_TIMER_STOP(get_snapshot_time);
 
   bool skip_memtable = (read_options.read_tier == kPersistedTier &&

db/db_impl/db_impl_write.cc

@@ -1734,14 +1734,16 @@ Status DB::Put(const WriteOptions& opt, ColumnFamilyHandle* column_family,
     }
     return Write(opt, &batch);
   }
-  Slice akey;
+  const Slice* ts = opt.timestamp;
-  std::string buf;
+  assert(nullptr != ts);
-  Status s = AppendTimestamp(key, *(opt.timestamp), &akey, &buf);
+  size_t ts_sz = ts->size();
+  WriteBatch batch(key.size() + ts_sz + value.size() + 24, /*max_bytes=*/0,
+                   ts_sz);
+  Status s = batch.Put(column_family, key, value);
   if (!s.ok()) {
     return s;
   }
-  WriteBatch batch(akey.size() + value.size() + 24);
+  s = batch.AssignTimestamp(*ts);
-  s = batch.Put(column_family, akey, value);
   if (!s.ok()) {
     return s;
   }

db/dbformat.cc

@@ -159,9 +159,11 @@ void InternalKeyComparator::FindShortSuccessor(std::string* key) const {
   }
 }
 
-LookupKey::LookupKey(const Slice& _user_key, SequenceNumber s) {
+LookupKey::LookupKey(const Slice& _user_key, SequenceNumber s,
+                     const Slice* ts) {
   size_t usize = _user_key.size();
-  size_t needed = usize + 13;  // A conservative estimate
+  size_t ts_sz = (nullptr == ts) ? 0 : ts->size();
+  size_t needed = usize + ts_sz + 13;  // A conservative estimate
   char* dst;
   if (needed <= sizeof(space_)) {
     dst = space_;
@@ -170,10 +172,14 @@ LookupKey::LookupKey(const Slice& _user_key, SequenceNumber s) {
   }
   start_ = dst;
   // NOTE: We don't support users keys of more than 2GB :)
-  dst = EncodeVarint32(dst, static_cast<uint32_t>(usize + 8));
+  dst = EncodeVarint32(dst, static_cast<uint32_t>(usize + ts_sz + 8));
   kstart_ = dst;
   memcpy(dst, _user_key.data(), usize);
   dst += usize;
+  if (nullptr != ts) {
+    memcpy(dst, ts->data(), ts_sz);
+    dst += ts_sz;
+  }
   EncodeFixed64(dst, PackSequenceAndType(s, kValueTypeForSeek));
   dst += 8;
   end_ = dst;

db/dbformat.h

@@ -669,20 +669,4 @@ struct ParsedInternalKeyComparator {
   const InternalKeyComparator* cmp;
 };
 
-// TODO (yanqin): this causes extra memory allocation and copy. Should be
-// addressed in the future.
-inline Status AppendTimestamp(const Slice& key, const Slice& timestamp,
-                              Slice* ret_key, std::string* ret_buf) {
-  assert(ret_key != nullptr);
-  assert(ret_buf != nullptr);
-  if (key.data() + key.size() == timestamp.data()) {
-    *ret_key = Slice(key.data(), key.size() + timestamp.size());
-  } else {
-    ret_buf->assign(key.data(), key.size());
-    ret_buf->append(timestamp.data(), timestamp.size());
-    *ret_key = Slice(*ret_buf);
-  }
-  return Status::OK();
-}
-
 }  // namespace rocksdb

db/lookup_key.h

@@ -21,7 +21,8 @@ class LookupKey {
  public:
   // Initialize *this for looking up user_key at a snapshot with
   // the specified sequence number.
-  LookupKey(const Slice& _user_key, SequenceNumber sequence);
+  LookupKey(const Slice& _user_key, SequenceNumber sequence,
+            const Slice* ts = nullptr);
 
   ~LookupKey();
 

db/write_batch.cc

@@ -135,6 +135,105 @@ struct BatchContentClassifier : public WriteBatch::Handler {
   }
 };
 
+class TimestampAssigner : public WriteBatch::Handler {
+ public:
+  explicit TimestampAssigner(const Slice& ts)
+      : timestamp_(ts), timestamps_(kEmptyTimestampList) {}
+  explicit TimestampAssigner(const std::vector<Slice>& ts_list)
+      : timestamps_(ts_list) {
+    SanityCheck();
+  }
+  ~TimestampAssigner() override {}
+
+  Status PutCF(uint32_t, const Slice& key, const Slice&) override {
+    AssignTimestamp(key);
+    ++idx_;
+    return Status::OK();
+  }
+
+  Status DeleteCF(uint32_t, const Slice& key) override {
+    AssignTimestamp(key);
+    ++idx_;
+    return Status::OK();
+  }
+
+  Status SingleDeleteCF(uint32_t, const Slice& key) override {
+    AssignTimestamp(key);
+    ++idx_;
+    return Status::OK();
+  }
+
+  Status DeleteRangeCF(uint32_t, const Slice& begin_key,
+                       const Slice& end_key) override {
+    AssignTimestamp(begin_key);
+    AssignTimestamp(end_key);
+    ++idx_;
+    return Status::OK();
+  }
+
+  Status MergeCF(uint32_t, const Slice& key, const Slice&) override {
+    AssignTimestamp(key);
+    ++idx_;
+    return Status::OK();
+  }
+
+  Status PutBlobIndexCF(uint32_t, const Slice&, const Slice&) override {
+    // TODO (yanqin): support blob db in the future.
+    return Status::OK();
+  }
+
+  Status MarkBeginPrepare(bool) override {
+    // TODO (yanqin): support in the future.
+    return Status::OK();
+  }
+
+  Status MarkEndPrepare(const Slice&) override {
+    // TODO (yanqin): support in the future.
+    return Status::OK();
+  }
+
+  Status MarkCommit(const Slice&) override {
+    // TODO (yanqin): support in the future.
+    return Status::OK();
+  }
+
+  Status MarkRollback(const Slice&) override {
+    // TODO (yanqin): support in the future.
+    return Status::OK();
+  }
+
+ private:
+  void SanityCheck() const {
+    assert(!timestamps_.empty());
+#ifndef NDEBUG
+    const size_t ts_sz = timestamps_[0].size();
+    for (size_t i = 1; i != timestamps_.size(); ++i) {
+      assert(ts_sz == timestamps_[i].size());
+    }
+#endif  // !NDEBUG
+  }
+
+  void AssignTimestamp(const Slice& key) {
+    assert(timestamps_.empty() || idx_ < timestamps_.size());
+    const Slice& ts = timestamps_.empty() ? timestamp_ : timestamps_[idx_];
+    size_t ts_sz = ts.size();
+    char* ptr = const_cast<char*>(key.data() + key.size() - ts_sz);
+    memcpy(ptr, ts.data(), ts_sz);
+  }
+
+  static const std::vector<Slice> kEmptyTimestampList;
+  const Slice timestamp_;
+  const std::vector<Slice>& timestamps_;
+  size_t idx_ = 0;
+
+  // No copy or move.
+  TimestampAssigner(const TimestampAssigner&) = delete;
+  TimestampAssigner(TimestampAssigner&&) = delete;
+  TimestampAssigner& operator=(const TimestampAssigner&) = delete;
+  TimestampAssigner&& operator=(TimestampAssigner&&) = delete;
+};
+const std::vector<Slice> TimestampAssigner::kEmptyTimestampList;
+
 }  // anon namespace
 
 struct SavePoints {
@@ -142,7 +241,15 @@ struct SavePoints {
 };
 
 WriteBatch::WriteBatch(size_t reserved_bytes, size_t max_bytes)
-    : content_flags_(0), max_bytes_(max_bytes), rep_() {
+    : content_flags_(0), max_bytes_(max_bytes), rep_(), timestamp_size_(0) {
+  rep_.reserve((reserved_bytes > WriteBatchInternal::kHeader)
+                   ? reserved_bytes
+                   : WriteBatchInternal::kHeader);
+  rep_.resize(WriteBatchInternal::kHeader);
+}
+
+WriteBatch::WriteBatch(size_t reserved_bytes, size_t max_bytes, size_t ts_sz)
+    : content_flags_(0), max_bytes_(max_bytes), rep_(), timestamp_size_(ts_sz) {
   rep_.reserve((reserved_bytes > WriteBatchInternal::kHeader) ?
     reserved_bytes : WriteBatchInternal::kHeader);
   rep_.resize(WriteBatchInternal::kHeader);
@@ -151,18 +258,21 @@ WriteBatch::WriteBatch(size_t reserved_bytes, size_t max_bytes)
 WriteBatch::WriteBatch(const std::string& rep)
     : content_flags_(ContentFlags::DEFERRED),
       max_bytes_(0),
-      rep_(rep) {}
+      rep_(rep),
+      timestamp_size_(0) {}
 
 WriteBatch::WriteBatch(std::string&& rep)
     : content_flags_(ContentFlags::DEFERRED),
       max_bytes_(0),
-      rep_(std::move(rep)) {}
+      rep_(std::move(rep)),
+      timestamp_size_(0) {}
 
 WriteBatch::WriteBatch(const WriteBatch& src)
     : wal_term_point_(src.wal_term_point_),
       content_flags_(src.content_flags_.load(std::memory_order_relaxed)),
       max_bytes_(src.max_bytes_),
-      rep_(src.rep_) {
+      rep_(src.rep_),
+      timestamp_size_(src.timestamp_size_) {
   if (src.save_points_ != nullptr) {
     save_points_.reset(new SavePoints());
     save_points_->stack = src.save_points_->stack;
@@ -174,7 +284,8 @@ WriteBatch::WriteBatch(WriteBatch&& src) noexcept
       wal_term_point_(std::move(src.wal_term_point_)),
       content_flags_(src.content_flags_.load(std::memory_order_relaxed)),
       max_bytes_(src.max_bytes_),
-      rep_(std::move(src.rep_)) {}
+      rep_(std::move(src.rep_)),
+      timestamp_size_(src.timestamp_size_) {}
 
 WriteBatch& WriteBatch::operator=(const WriteBatch& src) {
   if (&src != this) {
@@ -643,7 +754,14 @@ Status WriteBatchInternal::Put(WriteBatch* b, uint32_t column_family_id,
     b->rep_.push_back(static_cast<char>(kTypeColumnFamilyValue));
     PutVarint32(&b->rep_, column_family_id);
   }
+  if (0 == b->timestamp_size_) {
     PutLengthPrefixedSlice(&b->rep_, key);
+  } else {
+    PutVarint32(&b->rep_,
+                static_cast<uint32_t>(key.size() + b->timestamp_size_));
+    b->rep_.append(key.data(), key.size());
+    b->rep_.append(b->timestamp_size_, '\0');
+  }
   PutLengthPrefixedSlice(&b->rep_, value);
   b->content_flags_.store(
       b->content_flags_.load(std::memory_order_relaxed) | ContentFlags::HAS_PUT,
@@ -692,7 +810,11 @@ Status WriteBatchInternal::Put(WriteBatch* b, uint32_t column_family_id,
     b->rep_.push_back(static_cast<char>(kTypeColumnFamilyValue));
     PutVarint32(&b->rep_, column_family_id);
   }
+  if (0 == b->timestamp_size_) {
     PutLengthPrefixedSliceParts(&b->rep_, key);
+  } else {
+    PutLengthPrefixedSlicePartsWithPadding(&b->rep_, key, b->timestamp_size_);
+  }
   PutLengthPrefixedSliceParts(&b->rep_, value);
   b->content_flags_.store(
       b->content_flags_.load(std::memory_order_relaxed) | ContentFlags::HAS_PUT,
@@ -1038,6 +1160,16 @@ Status WriteBatch::PopSavePoint() {
   return Status::OK();
 }
 
+Status WriteBatch::AssignTimestamp(const Slice& ts) {
+  TimestampAssigner ts_assigner(ts);
+  return Iterate(&ts_assigner);
+}
+
+Status WriteBatch::AssignTimestamps(const std::vector<Slice>& ts_list) {
+  TimestampAssigner ts_assigner(ts_list);
+  return Iterate(&ts_assigner);
+}
+
 class MemTableInserter : public WriteBatch::Handler {
 
   SequenceNumber sequence_;

include/rocksdb/write_batch.h

@@ -28,6 +28,7 @@
 #include <atomic>
 #include <memory>
 #include <string>
+#include <vector>
 #include "rocksdb/status.h"
 #include "rocksdb/write_batch_base.h"
 
@@ -60,6 +61,7 @@ struct SavePoint {
 class WriteBatch : public WriteBatchBase {
  public:
   explicit WriteBatch(size_t reserved_bytes = 0, size_t max_bytes = 0);
+  explicit WriteBatch(size_t reserved_bytes, size_t max_bytes, size_t ts_sz);
   ~WriteBatch() override;
 
   using WriteBatchBase::Put;
@@ -311,6 +313,12 @@ class WriteBatch : public WriteBatchBase {
   // Returns trie if MarkRollback will be called during Iterate
   bool HasRollback() const;
 
+  // Assign timestamp to write batch
+  Status AssignTimestamp(const Slice& ts);
+
+  // Assign timestamps to write batch
+  Status AssignTimestamps(const std::vector<Slice>& ts_list);
+
   using WriteBatchBase::GetWriteBatch;
   WriteBatch* GetWriteBatch() override { return this; }
 
@@ -361,6 +369,7 @@ class WriteBatch : public WriteBatchBase {
 
  protected:
   std::string rep_;  // See comment in write_batch.cc for the format of rep_
+  const size_t timestamp_size_;
 
   // Intentionally copyable
 };

util/coding.h

@@ -50,6 +50,8 @@ extern void PutVarint32Varint32Varint64(std::string* dst, uint32_t value1,
 extern void PutLengthPrefixedSlice(std::string* dst, const Slice& value);
 extern void PutLengthPrefixedSliceParts(std::string* dst,
                                         const SliceParts& slice_parts);
+extern void PutLengthPrefixedSlicePartsWithPadding(
+    std::string* dst, const SliceParts& slice_parts, size_t pad_sz);
 
 // Standard Get... routines parse a value from the beginning of a Slice
 // and advance the slice past the parsed value.
@@ -306,9 +308,8 @@ inline void PutLengthPrefixedSlice(std::string* dst, const Slice& value) {
   dst->append(value.data(), value.size());
 }
 
-inline void PutLengthPrefixedSliceParts(std::string* dst,
+inline void PutLengthPrefixedSliceParts(std::string* dst, size_t total_bytes,
                                         const SliceParts& slice_parts) {
-  size_t total_bytes = 0;
   for (int i = 0; i < slice_parts.num_parts; ++i) {
     total_bytes += slice_parts.parts[i].size();
   }
@@ -318,6 +319,17 @@ inline void PutLengthPrefixedSliceParts(std::string* dst,
   }
 }
 
+inline void PutLengthPrefixedSliceParts(std::string* dst,
+                                        const SliceParts& slice_parts) {
+  PutLengthPrefixedSliceParts(dst, /*total_bytes=*/0, slice_parts);
+}
+
+inline void PutLengthPrefixedSlicePartsWithPadding(
+    std::string* dst, const SliceParts& slice_parts, size_t pad_sz) {
+  PutLengthPrefixedSliceParts(dst, /*total_bytes=*/pad_sz, slice_parts);
+  dst->append(pad_sz, '\0');
+}
+
 inline int VarintLength(uint64_t v) {
   int len = 1;
   while (v >= 128) {