Summary:
With WritePrepared transaction, flush/compaction can contain uncommitted keys, and those keys can get committed during compaction. If a snapshot is taken before the key is committed, it should not see the key. On the other hand, compaction grab the list of snapshots at its beginning, and only consider those snapshots to dedup keys. Consider the case:
```
seq = 1: put "foo" = "bar"
seq = 2: transaction T: delete "foo", prepare
seq = 3: compaction start
seq = 4: take snapshot S
seq = 5: transaction T: commit.
...
seq = N: compaction iterator reached key "foo".
```
When compaction start, the list of snapshot is empty. Compaction doesn't take snapshot S into account. When it reached "foo", transaction T is committed. Compaction may think the value "foo=bar" is not visible by any snapshot (which is wrong), and compact the value out.
The fix is to explicitly take a snapshot before compaction grabbing the list of snapshots. Compaction will then has to keep keys visible to this snapshot.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4883
Differential Revision: D13668775
Pulled By: maysamyabandeh
fbshipit-source-id: 1cab9615f94b7d3e8522cc3d44c3a14c7d4720e4
Summary:
The AdvanceMaxEvictedSeq algorithm assumes that new snapshots always have sequence number larger than the last max_evicted_seq_. To enforce this assumption we make two changes:
i) max is not advanced beyond the last published seq, with the exception that the evicted commit entry itself is not published yet, which is quite rare.
ii) When obtaining the snapshot if the max_evicted_seq_ is not published yet, commit a dummy entry so that it waits for it to be published and also increased the latest published seq by one above the max.
To test these non-realistic corner cases we create a commit cache with size 1 so that every single commit results into eviction.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4886
Differential Revision: D13685270
Pulled By: maysamyabandeh
fbshipit-source-id: 5461bc09c2a9b75798bfcb9853a256c81cdac0b0
Summary:
When prepared_txns_ heap is empty, SmallestUnCommittedSeq() should check delayed_prepared_ set as well.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4867
Differential Revision: D13632134
Pulled By: maysamyabandeh
fbshipit-source-id: b0423bb0a58dc95f1e636d5ed3f6e619df801fb7
Summary:
currently clang analyze fails with the following warning:
> utilities/transactions/write_prepared_transaction_test.cc:1451:5: warning: Forming reference to null pointer
ASSERT_GT(wp_db->max_evicted_seq_, 0); // max after recovery
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4871
Differential Revision: D13638053
Pulled By: miasantreble
fbshipit-source-id: b192b0c13c411c58defc9e280b34cdfcab3fa8e3
Summary:
Previously IsInSnapshot assumed that the snapshot is valid at the time that the function is called. However there are cases where that might not be valid. Example is background compactions where the compaction algorithm operates with a list of snapshots some of which might be released by the time they are being passed to IsInSnapshot. The patch make two changes to enable the caller to tell difference: i) any live snapshot below max is added to max_committed_seq_, which allows IsInSnapshot to confidently tell whether the passed snapshot is invalid if it below max, ii) extends IsInSnapshot API with a "released" variable that is set true when IsInSnapshot find no such snapshot below max and also find no other way to give a certain return value. In such cases the return value is true but the caller should also check the "released" boolean after the call.
In short here is the changes in the API:
i) If the snapshot is valid, no change is required.
ii) If the snapshot might be invalid, a reference to "released" boolean must be passed to IsInSnapshot.
ii-a) If snapshot is above max, IsInSnapshot can figure the return valid using the commit cache.
ii-b) otherwise if snapshot is in old_commit_map_, IsInSnapshot can use that to tell if value was visible to the snapshot.
ii-c) otherwise it sets "released" to true and returns true as well.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4856
Differential Revision: D13599847
Pulled By: maysamyabandeh
fbshipit-source-id: 1752be28667f886a1efec8cae5714b9b7a8f1e0f
Summary:
IsInSnapshotEmptyMapTest tests that IsInSnapshot returns correct value for existing data after a recovery, where max is not zero and yet commit cache is empty. The existing test was preliminary which is improved in this patch. It also increases the db sequence after recovery so that there the snapshot immediately taken after recovery would have a sequence number different than that of max_evicted_seq. This simplifies the logic in IsInSnapshot by not having to consider the special case that an old snapshot might be equal to max_evicted_seq and yet not present in old_commit_map.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4853
Differential Revision: D13595223
Pulled By: maysamyabandeh
fbshipit-source-id: 77c12ca8a3f61a47479a93bef2038ff502dc3322
Summary:
The fix in #4727 for double snapshot release was incomplete since it does not properly remove the duplicate entires in the snapshot list after finding that a snapshot is still valid. The patch does that and also improves the unit test to show the issue.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4734
Differential Revision: D13266260
Pulled By: maysamyabandeh
fbshipit-source-id: 351e2c40cca45a87b757774c11af74182314911e
Summary:
Currently the garbage collection of items in old_commit_map_ was done upon ::ReleaseSnapshot. The assumption behind this method was that the sequence number of snapshots are unique, which is incorrect. In the very rare cases that two consecutive snapshot have the same sequence number this could lead the release of the first snapshot affect the old_commit_map_ that is necessary to service the reads of the second snapshot. The bug would be triggered only if i) two snapshot have the same seq, ii) both of them are very old (older than the last ~4m transactions), and iii) there is commit entry overlapping with the snapshot seq number.
It is fixed by doing the cleanup of old_commit_map_ in UpdateSnapshot: the new list of snapshots are compared with the old one and the missing sequence numbers are concluded released. If two snapshots have the same seq number, after the release of one of them, the seq number still appears in the snapshot least and thus not cleaned up prematurely.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4727
Differential Revision: D13246495
Pulled By: maysamyabandeh
fbshipit-source-id: 93b87a5042afd8060889df245526d3f5d29de9fe
Summary:
When evicting an entry form the commit_cache, it is verified against the list of old snapshots to see if it overlaps with any. The list of old snapshots is split into two lists: an efficient concurrent cache and an slow vector protected by a lock. The patch fixes a bug that would stop the search in the cache if it finds any and yet would not include the larger snapshots in the slower list.
An extra info log entry is also removed. The condition to trigger that although very rare is still feasible and should not spam the LOG when that happens.
Fixes#4621
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4639
Differential Revision: D12934989
Pulled By: maysamyabandeh
fbshipit-source-id: 4e0fe8147ba292b554ae78e94c21c2ef31e03e2d
Summary:
TransactionOptions::skip_concurrency_control allows pessimistic transactions to skip the overhead of concurrency control. This could be as an optimization if the application knows that the transaction would not have any conflict with concurrent transactions. It is currently used during recovery assuming (i) application guarantees no conflict between prepared transactions in the WAL (ii) application guarantees that recovered transactions will be rolled back/commit before new transactions start.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4346
Differential Revision: D9759149
Pulled By: maysamyabandeh
fbshipit-source-id: f896e84fa58b0b584be904c7fd3883a41ea3215b
Summary:
Right now, `ldb idump` may have memory out of control if there is a big range of tombstones. Add an option to cut maxinum number of keys in GetAllKeyVersions(), and push down --max_num_ikeys from ldb.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4271
Differential Revision: D9369149
Pulled By: siying
fbshipit-source-id: 7cbb797b7d2fa16573495a7e84937456d3ff25bf
Summary:
The patch makes sure that two parallel test threads will operate on different db paths. This enables using open source tools such as gtest-parallel to run the tests of a file in parallel.
Example: ``` ~/gtest-parallel/gtest-parallel ./table_test```
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4135
Differential Revision: D8846653
Pulled By: maysamyabandeh
fbshipit-source-id: 799bad1abb260e3d346bcb680d2ae207a852ba84
Summary:
In order to make valgrind check test to pass in a day, remove some tests that run prohibitively slow under valgrind.
Closes https://github.com/facebook/rocksdb/pull/3924
Differential Revision: D8210184
Pulled By: siying
fbshipit-source-id: 5b06fb08f3cf57571d422d05a0dbddc9f9376f7a
Summary:
The tsan flavor of SeqAdvanceConcurrentTest times out in our test infra. The patch splits it into 10 tests.
On my vm before:
[ OK ] WritePreparedTransactionTest/WritePreparedTransactionTest.SeqAdvanceConcurrentTest/0 (5194 ms)
after:
[ OK ] OneWriteQueue/SeqAdvanceConcurrentTest.SeqAdvanceConcurrentTest/0 (1906 ms)
Closes https://github.com/facebook/rocksdb/pull/3799
Differential Revision: D7854515
Pulled By: maysamyabandeh
fbshipit-source-id: 4fbac42a1f974326cbc237f8cb9d6232d379c431
Summary:
this PR fixes a few failed contbuild:
1. ASAN memory leak in Block::NewIterator (table/block.cc:429). the proper destruction of first_level_iter_ and second_level_iter_ of two_level_iterator.cc is missing from the code after the refactoring in https://github.com/facebook/rocksdb/pull/3406
2. various unused param errors introduced by https://github.com/facebook/rocksdb/pull/3662
3. updated comment for `ForceReleaseCachedEntry` to emphasize the use of `force_erase` flag.
Closes https://github.com/facebook/rocksdb/pull/3718
Reviewed By: maysamyabandeh
Differential Revision: D7621192
Pulled By: miasantreble
fbshipit-source-id: 476c94264083a0730ded957c29de7807e4f5b146
Summary:
This PR comments out the rest of the unused arguments which allow us to turn on the -Wunused-parameter flag. This is the second part of a codemod relating to https://github.com/facebook/rocksdb/pull/3557.
Closes https://github.com/facebook/rocksdb/pull/3662
Differential Revision: D7426121
Pulled By: Dayvedde
fbshipit-source-id: 223994923b42bd4953eb016a0129e47560f7e352
Summary:
We introduced smallest_prep optimization in this commit b225de7e10, which enables storing the smallest uncommitted sequence number along with the snapshot. This enables the readers that read from the snapshot to skip further checks and safely assumed the data is committed if its sequence number is less than smallest uncommitted when the snapshot was taken. The problem was that smallest uncommitted and the snapshot must be taken atomically, and the lack of atomicity had led to readers using a smallest uncommitted after the snapshot was taken and hence mistakenly skipping some data.
This patch fixes the problem by i) separating the process of removing of prepare entries from the AddCommitted function, ii) removing the prepare entires AFTER the committed sequence number is published, iii) getting smallest uncommitted (from the prepare list) BEFORE taking a snapshot. This guarantees that the smallest uncommitted that is accompanied with a snapshot is less than or equal of such number if it was obtained atomically.
Tested by running MySQLStyleTransactionTest/MySQLStyleTransactionTest.TransactionStressTest that was failing sporadically.
Closes https://github.com/facebook/rocksdb/pull/3703
Differential Revision: D7581934
Pulled By: maysamyabandeh
fbshipit-source-id: dc9d6f4fb477eba75d4d5927326905b548a96a32
Summary:
Currently AddPrepared is performed only on the first sub-batch if there are duplicate keys in the write batch. This could cause a problem if the transaction takes too long to commit and the seq number of the first sub-patch moved to old_prepared_ but not the seq of the later ones. The patch fixes this by calling AddPrepared for all sub-patches.
Closes https://github.com/facebook/rocksdb/pull/3651
Differential Revision: D7388635
Pulled By: maysamyabandeh
fbshipit-source-id: 0ccd80c150d9bc42fe955e49ddb9d7ca353067b4
Summary:
Make use of the index in WriteBatchWithIndex to also count the number of sub-batches. This eliminates the need to separately scan the batch to count the number of sub-batches once a duplicate key is detected.
Closes https://github.com/facebook/rocksdb/pull/3529
Differential Revision: D7049947
Pulled By: maysamyabandeh
fbshipit-source-id: 81cbf12c4e662541c772c7265a8f91631e25c7cd
Summary:
Under a certain sequence of accessing PreparedHeap, there was a bug that would not successfully empty the heap. This would result in performance issues when the heap content is moved to old_prepared_ after max_evicted_seq_ advances the orphan prepared sequence numbers. The patch fixed the bug and add more unit tests. It also does more logging when the unlikely scenarios are faced
Closes https://github.com/facebook/rocksdb/pull/3526
Differential Revision: D7038486
Pulled By: maysamyabandeh
fbshipit-source-id: f1e40bea558f67b03d2a29131fcb8734c65fce97
Summary:
TransactionDB::Write can receive some optimization hints from the user. One is to skip the concurrency control mechanism. WritePreparedTxnDB is currently ignoring such hints. This patch optimizes WritePreparedTxnDB::Write for skip_concurrency_control and skip_duplicate_key_check hints.
Closes https://github.com/facebook/rocksdb/pull/3496
Differential Revision: D6971784
Pulled By: maysamyabandeh
fbshipit-source-id: cbab10ad538fa2b8bcb47e37c77724afe6e30f03
Summary:
WritePreparedTransactionTest has the UBSAN error because the wrong order of its parent class construction. Fix it.
Closes https://github.com/facebook/rocksdb/pull/3478
Differential Revision: D6928975
Pulled By: siying
fbshipit-source-id: 13edfd5cb9cf73f1ac5ae3b6f53061d32783733d
Summary:
Without this patch, ubsan_check is currently failing with this error:
```
utilities/transactions/write_prepared_transaction_test.cc:369:63: runtime error: member call on address 0x0000051649f8 which does not point to an object of type 'WithParamInterface'
0x0000051649f8: note: object has invalid vptr
```
Tested by `COMPILE_WITH_UBSAN=1 make -j32 transaction_test` and running `./write_prepared_transaction_test --gtest_filter=TwoWriteQueues/SnapshotConcurrentAccessTest.SnapshotConcurrentAccessTest1/0`
Closes https://github.com/facebook/rocksdb/pull/3444
Differential Revision: D6850087
Pulled By: maysamyabandeh
fbshipit-source-id: 5b254da8504b8757f7aec8a820ad464154da1a1d
Summary:
SnapshotConcurrentAccessTest sometimes times out when running on the test infra. This patch splits the test into smaller sub-tests to avoid the timeout. It also benefits from lower run-time of each sub-test and increases the coverage of the test. The overall run-time of each final sub-test is at most half of the original test so we should no longer see a timeout.
Closes https://github.com/facebook/rocksdb/pull/3435
Differential Revision: D6839427
Pulled By: maysamyabandeh
fbshipit-source-id: d53fdb157109e2438ca7fe447d0cf4b71f304bd8
Summary:
This patch addresses a couple of minor TODOs for WritePrepared Txn such as double checking some assert statements at runtime as well, skip extra AddPrepared in non-2pc transactions, and safety check for infinite loops.
Closes https://github.com/facebook/rocksdb/pull/3302
Differential Revision: D6617002
Pulled By: maysamyabandeh
fbshipit-source-id: ef6673c139cb49f64c0879508d2f573b78609aca
Summary:
A proper implementation of Iterator::Refresh() for WritePreparedTxnDB would require release and acquire another snapshot. Since MyRocks don't make use of Iterator::Refresh(), we just simply mark it as not supported.
Closes https://github.com/facebook/rocksdb/pull/3290
Differential Revision: D6599931
Pulled By: yiwu-arbug
fbshipit-source-id: 4e1632d967316431424f6e458254ecf9a97567cf
Summary:
Currently non-2pc writes do the 2nd dummy write to actually commit the transaction. This was necessary to ensure that publishing the commit sequence number will be done only from one queue (the queue that does not write to memtable). This is however not necessary when we have only one write queue, which is actually the setup that would be used by non-2pc writes. This patch eliminates the 2nd write when two_write_queues are disabled by updating the commit map in the 1st write.
Closes https://github.com/facebook/rocksdb/pull/3277
Differential Revision: D6575392
Pulled By: maysamyabandeh
fbshipit-source-id: 8ab458f7ca506905962f9166026b2ec81e749c46
Summary:
Add PreReleaseCallback to be called at the end of WriteImpl but before publishing the sequence number. The callback is used in WritePrepareTxn to i) update the commit map, ii) update the last published sequence number in the 2nd write queue. It also ensures that all the commits will go to the 2nd queue.
These changes will ensure that the commit map is updated before the sequence number is published and used by reading snapshots. If we use two write queues, the snapshots will use the seq number published by the 2nd queue. If we use one write queue (the default, the snapshots will use the last seq number in the memtable, which also indicates the last published seq number.
Closes https://github.com/facebook/rocksdb/pull/3205
Differential Revision: D6438959
Pulled By: maysamyabandeh
fbshipit-source-id: f8b6c434e94bc5f5ab9cb696879d4c23e2577ab9
Summary:
This patch implements MultiGet API for WritePreparedTxnDB and update the existing unit tests.
Closes https://github.com/facebook/rocksdb/pull/3196
Differential Revision: D6401493
Pulled By: maysamyabandeh
fbshipit-source-id: 51501a1e32645fc2da8680e77a50035f6530f2cc
Summary:
The sequence number was not properly advanced after a rollback marker. The patch extends the existing unit tests to detect the bug and also fixes it.
Closes https://github.com/facebook/rocksdb/pull/3157
Differential Revision: D6304291
Pulled By: maysamyabandeh
fbshipit-source-id: 1b519c44a5371b802da49c9e32bd00087a8da401
Summary:
Add tests to ensure that WritePrepared and WriteCommitted policies are cross compatible when the db WAL is empty. This is important when the admin want to switch between the policies. In such case, before the switch the admin needs to empty the WAL by i) committing/rollbacking all the pending transactions, ii) FlushMemTables
Closes https://github.com/facebook/rocksdb/pull/3118
Differential Revision: D6227247
Pulled By: maysamyabandeh
fbshipit-source-id: bcde3d92c1e89cda3b9cfa69f6a20af5d8993db7
Summary:
Move WritePreparedTxnDB from pessimistic_transaction_db.h to its own header, write_prepared_txn_db.h
Closes https://github.com/facebook/rocksdb/pull/3114
Differential Revision: D6220987
Pulled By: maysamyabandeh
fbshipit-source-id: 18893fb4fdc6b809fe117dabb544080f9b4a301b
Summary:
A few simple changes to allow RocksDB to be built on OpenBSD. Let me know if any further changes are needed.
Closes https://github.com/facebook/rocksdb/pull/3061
Differential Revision: D6138800
Pulled By: ajkr
fbshipit-source-id: a13a17b5dc051e6518bd56a8c5efd1d24dd81b0c
Summary:
Enable concurrent_prepare flag for WritePrepared transactions and extend the existing transaction tests with this config.
Closes https://github.com/facebook/rocksdb/pull/3046
Differential Revision: D6106534
Pulled By: maysamyabandeh
fbshipit-source-id: 88c8d21d45bc492beb0a131caea84a2ac5e7d38c
Summary:
On iterator create, take a snapshot, create a ReadCallback and pass the ReadCallback to the underlying DBIter to check if key is committed.
Closes https://github.com/facebook/rocksdb/pull/2981
Differential Revision: D6001471
Pulled By: yiwu-arbug
fbshipit-source-id: 3565c4cdaf25370ba47008b0e0cb65b31dfe79fe
Summary:
Update Compaction/Flush to support WritePreparedTxnDB: Add SnapshotChecker which is a proxy to query WritePreparedTxnDB::IsInSnapshot. Pass SnapshotChecker to DBImpl on WritePreparedTxnDB open. CompactionIterator use it to check if a key has been committed and if it is visible to a snapshot. In CompactionIterator:
* check if key has been committed. If not, output uncommitted keys AS-IS.
* use SnapshotChecker to check if key is visible to a snapshot when in need.
* do not output key with seq = 0 if the key is not committed.
Closes https://github.com/facebook/rocksdb/pull/2926
Differential Revision: D5902907
Pulled By: yiwu-arbug
fbshipit-source-id: 945e037fdf0aa652dc5ba0ad879461040baa0320
Summary:
Compaction will output keys with sequence number 0, if it is visible to
earliest snapshot. Adding a test to make sure IsInSnapshot() report sequence number 0 is
visible to any snapshot.
Closes https://github.com/facebook/rocksdb/pull/2974
Differential Revision: D5990665
Pulled By: yiwu-arbug
fbshipit-source-id: ef50ebc777ff8ca688771f3ab598c7a609b0b65e
Summary:
With WriteCommitted, when the write batch has duplicate keys, the txn db simply inserts them to the db with different seq numbers and let the db ignore/merge the duplicate values at the read time. With WritePrepared all the entries of the batch are inserted with the same seq number which prevents us from benefiting from this simple solution.
This patch applies a hackish solution to unblock the end-to-end testing. The hack is to be replaced with a proper solution soon. The patch simply detects the duplicate key insertions, and mark the previous one as obsolete. Then before writing to the db it rewrites the batch eliminating the obsolete keys. This would incur a memcpy cost. Furthermore handing duplicate merge would require to do FullMerge instead of simply ignoring the previous value, which is not handled by this patch.
Closes https://github.com/facebook/rocksdb/pull/2969
Differential Revision: D5976337
Pulled By: maysamyabandeh
fbshipit-source-id: 114e65b66f137d8454ff2d1d782b8c05da95f989
Summary:
Implement the rollback of WritePrepared txns. For each modified value, it reads the value before the txn and write it back. This would cancel out the effect of transaction. It also remove the rolled back txn from prepared heap.
Closes https://github.com/facebook/rocksdb/pull/2946
Differential Revision: D5937575
Pulled By: maysamyabandeh
fbshipit-source-id: a6d3c47f44db3729f44b287a80f97d08dc4e888d
Summary:
Recover txns from the WAL. Also added some unit tests.
Closes https://github.com/facebook/rocksdb/pull/2901
Differential Revision: D5859596
Pulled By: maysamyabandeh
fbshipit-source-id: 6424967b231388093b4effffe0a3b1b7ec8caeb0
Summary:
By default the seq number in DB is increased once per written key. WritePrepared txns requires the seq to be increased once per the entire batch so that the seq would be used as the prepare timestamp by which the transaction is identified. Also we need to increase seq for the commit marker since it would give a unique id to the commit timestamp of transactions.
Two unit tests are added to verify our understanding of how the seq should be increased. The recovery path requires much more work and is left to another patch.
Closes https://github.com/facebook/rocksdb/pull/2885
Differential Revision: D5837843
Pulled By: maysamyabandeh
fbshipit-source-id: a08960b93d727e1cf438c254d0c2636fb133cc1c
Summary:
We had two proposals for lock-free commit maps. This patch implements the latter one that was simpler. We can later experiment with both proposals.
In this impl each entry is an std::atomic of uint64_t, which are accessed via memory_order_acquire/release. In x86_64 arch this is compiled to simple reads and writes from memory.
Closes https://github.com/facebook/rocksdb/pull/2861
Differential Revision: D5800724
Pulled By: maysamyabandeh
fbshipit-source-id: 41abae9a4a5df050a8eb696c43de11c2770afdda
Yi Wu